Strain Fitness in Pseudomonas sp. RS175 around PFR28_04561

Experiment: Inosine carbon 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Inosine carbon 10 mM
5,209,038	+		PFR28_04560	0.19	-0.0
5,209,092	+		PFR28_04560	0.24	-0.9
5,209,092	+		PFR28_04560	0.24	-1.6
5,209,092	+		PFR28_04560	0.24	+0.5
5,209,093	-		PFR28_04560	0.24	-1.9
5,209,093	-		PFR28_04560	0.24	+1.1
5,209,141	+		PFR28_04560	0.28	+0.4
5,209,141	+		PFR28_04560	0.28	-0.2
5,209,153	-		PFR28_04560	0.29	+0.5
5,209,164	+		PFR28_04560	0.30	-0.7
5,209,164	+		PFR28_04560	0.30	+0.8
5,209,164	+		PFR28_04560	0.30	+0.6
5,209,165	-		PFR28_04560	0.30	+0.3
5,209,165	-		PFR28_04560	0.30	+0.3
5,209,206	+		PFR28_04560	0.34	+0.6
5,209,206	+		PFR28_04560	0.34	-0.2
5,209,206	+		PFR28_04560	0.34	-0.7
5,209,206	+		PFR28_04560	0.34	-0.7
5,209,206	+		PFR28_04560	0.34	+0.9
5,209,207	-		PFR28_04560	0.34	+0.0
5,209,207	-		PFR28_04560	0.34	-1.4
5,209,207	-		PFR28_04560	0.34	-1.0
5,209,269	+		PFR28_04560	0.40	-0.6
5,209,269	+		PFR28_04560	0.40	-1.0
5,209,269	+		PFR28_04560	0.40	-0.1
5,209,269	+		PFR28_04560	0.40	+0.0
5,209,269	+		PFR28_04560	0.40	+0.5
5,209,269	+		PFR28_04560	0.40	-0.8
5,209,269	+		PFR28_04560	0.40	-0.6
5,209,269	+		PFR28_04560	0.40	-0.2
5,209,269	+		PFR28_04560	0.40	-0.9
5,209,269	+		PFR28_04560	0.40	+0.5
5,209,269	+		PFR28_04560	0.40	+0.3
5,209,269	+		PFR28_04560	0.40	+1.0
5,209,269	+		PFR28_04560	0.40	-0.9
5,209,269	+		PFR28_04560	0.40	-0.9
5,209,270	-		PFR28_04560	0.40	+0.3
5,209,270	-		PFR28_04560	0.40	+0.0
5,209,270	-		PFR28_04560	0.40	+0.0
5,209,270	-		PFR28_04560	0.40	-0.4
5,209,270	-		PFR28_04560	0.40	-0.6
5,209,270	-		PFR28_04560	0.40	-0.2
5,209,288	+		PFR28_04560	0.41	-0.3
5,209,288	+		PFR28_04560	0.41	-1.1
5,209,289	-		PFR28_04560	0.41	-0.5
5,209,326	+		PFR28_04560	0.45	+0.5
5,209,326	+		PFR28_04560	0.45	-3.2
5,209,326	+		PFR28_04560	0.45	+0.5
5,209,327	-		PFR28_04560	0.45	-1.2
5,209,327	-		PFR28_04560	0.45	-0.2
5,209,327	-		PFR28_04560	0.45	-0.1
5,209,347	+		PFR28_04560	0.46	-0.9
5,209,348	-		PFR28_04560	0.47	-1.4
5,209,431	+		PFR28_04560	0.54	+0.5
5,209,431	+		PFR28_04560	0.54	-0.4
5,209,432	-		PFR28_04560	0.54	-1.8
5,209,434	+		PFR28_04560	0.54	-0.7
5,209,434	+		PFR28_04560	0.54	-0.2
5,209,434	+		PFR28_04560	0.54	-2.5
5,209,434	+		PFR28_04560	0.54	+0.5
5,209,434	+		PFR28_04560	0.54	+0.1
5,209,434	+		PFR28_04560	0.54	+1.3
5,209,434	+		PFR28_04560	0.54	-2.1
5,209,434	+		PFR28_04560	0.54	-0.5
5,209,434	+		PFR28_04560	0.54	+0.1
5,209,434	+		PFR28_04560	0.54	-0.0
5,209,434	+		PFR28_04560	0.54	-1.0
5,209,434	+		PFR28_04560	0.54	-0.1
5,209,434	+		PFR28_04560	0.54	+0.7
5,209,435	-		PFR28_04560	0.54	+2.5
5,209,435	-		PFR28_04560	0.54	-0.5
5,209,435	-		PFR28_04560	0.54	+1.3
5,209,435	-		PFR28_04560	0.54	-0.4
5,209,435	-		PFR28_04560	0.54	-0.4
5,209,435	-		PFR28_04560	0.54	+1.0
5,209,435	-		PFR28_04560	0.54	-1.1
5,209,448	+		PFR28_04560	0.55	-0.5
5,209,448	+		PFR28_04560	0.55	-1.1
5,209,614	+		PFR28_04560	0.70	-0.0
5,209,614	+		PFR28_04560	0.70	-0.8
5,209,614	+		PFR28_04560	0.70	+0.7
5,209,615	-		PFR28_04560	0.70	-1.3
5,209,615	-		PFR28_04560	0.70	+0.6
5,209,684	-		PFR28_04560	0.76	+0.9
5,209,684	-		PFR28_04560	0.76	+0.1
5,209,684	-		PFR28_04560	0.76	+1.6
5,209,684	-		PFR28_04560	0.76	-0.6
5,209,728	+		PFR28_04560	0.80	-0.1
5,209,728	+		PFR28_04560	0.80	-0.1
5,209,728	+		PFR28_04560	0.80	+0.7
5,209,728	+		PFR28_04560	0.80	-0.6
5,209,729	-		PFR28_04560	0.80	-0.6
5,209,729	-		PFR28_04560	0.80	+2.5
5,209,729	-		PFR28_04560	0.80	-1.1
5,209,729	-		PFR28_04560	0.80	+1.5
5,209,737	-		PFR28_04560	0.81	-1.0
5,209,737	-		PFR28_04560	0.81	-0.6
5,209,870	+				-0.5
5,209,870	+				+0.3
5,209,870	+				-1.6
5,209,871	-				+0.7
5,209,871	-				-0.0
5,209,909	+				-1.3
5,209,909	+				-1.8
5,209,909	+				-0.7
5,209,909	+				+0.0
5,209,910	-				-1.5
5,209,910	-				-2.4
5,209,910	-				-1.2
5,209,910	-				-0.8
5,209,910	-				+0.6
5,209,910	-				-1.0
5,209,910	-				+1.2
5,209,910	-				-1.0
5,209,910	-				+0.1
5,209,910	-				+0.9
5,209,910	-				+0.7
5,209,910	-				-0.7
5,209,910	-				-1.5
5,209,910	-				-0.1
5,209,910	-				-0.7
5,209,910	-				-0.1
5,209,910	-				+1.1
5,209,910	-				-0.7
5,209,910	-				-0.5
5,209,911	+				+0.6
5,209,911	+				+0.6
5,209,911	+				-1.1
5,209,911	+				-0.1
5,209,911	+				-1.4
5,209,911	+				+1.3
5,209,911	+				+0.9
5,209,911	+				-0.0
5,209,911	+				+0.2
5,209,911	+				+0.6
5,209,911	+				+0.7
5,209,912	-				+0.1
5,209,912	-				+0.3
5,209,912	-				+1.9
5,209,912	-				-0.6
5,209,912	-				-0.7
5,209,912	-				-0.8
5,209,912	-				+1.9
5,209,912	-				-1.0
5,209,912	-				+0.5
5,209,912	-				+0.8
5,209,912	-				+0.7
5,209,912	-				+0.7
5,209,921	+				+0.8
5,209,921	+				-0.4
5,209,921	+				-0.6
5,209,921	+				+1.2
5,209,922	-				+1.3
5,209,944	+				-1.0
5,209,944	+				+0.8
5,209,944	+				+0.4
5,209,944	+				+0.6
5,209,945	-				+0.0
5,209,945	-				-0.3
5,209,945	-				-0.5
5,209,945	-				-0.5
5,210,139	+		PFR28_04561	0.17	-2.0
5,210,139	+		PFR28_04561	0.17	-0.4
5,210,139	+		PFR28_04561	0.17	-0.6
5,210,139	+		PFR28_04561	0.17	+0.6
5,210,139	+		PFR28_04561	0.17	+0.3
5,210,139	+		PFR28_04561	0.17	-0.1
5,210,139	+		PFR28_04561	0.17	+0.1
5,210,140	-		PFR28_04561	0.17	-0.3
5,210,140	-		PFR28_04561	0.17	-0.6
5,210,140	-		PFR28_04561	0.17	-0.4
5,210,140	-		PFR28_04561	0.17	-0.3
5,210,140	-		PFR28_04561	0.17	+1.1
5,210,140	-		PFR28_04561	0.17	-0.3
5,210,140	-		PFR28_04561	0.17	+0.3
5,210,167	+		PFR28_04561	0.22	-0.2
5,210,167	+		PFR28_04561	0.22	+0.7
5,210,167	+		PFR28_04561	0.22	-0.9
5,210,167	+		PFR28_04561	0.22	+1.2
5,210,167	+		PFR28_04561	0.22	-1.1
5,210,167	+		PFR28_04561	0.22	-3.2
5,210,167	+		PFR28_04561	0.22	+0.3
5,210,167	+		PFR28_04561	0.22	-0.4
5,210,167	+		PFR28_04561	0.22	-0.1
5,210,167	+		PFR28_04561	0.22	-0.9
5,210,168	-		PFR28_04561	0.22	-0.3
5,210,168	-		PFR28_04561	0.22	-0.6
5,210,168	-		PFR28_04561	0.22	+0.0
5,210,168	-		PFR28_04561	0.22	-0.2
5,210,168	-		PFR28_04561	0.22	+1.2
5,210,168	-		PFR28_04561	0.22	-2.2
5,210,168	-		PFR28_04561	0.22	-0.6
5,210,168	-		PFR28_04561	0.22	-0.7
5,210,168	-		PFR28_04561	0.22	-1.6
5,210,168	-		PFR28_04561	0.22	+0.2
5,210,173	+		PFR28_04561	0.23	+1.0
5,210,173	+		PFR28_04561	0.23	-1.2
5,210,173	+		PFR28_04561	0.23	+0.1
5,210,173	+		PFR28_04561	0.23	-1.6
5,210,174	-		PFR28_04561	0.23	-0.4
5,210,215	+		PFR28_04561	0.29	-0.1
5,210,216	-		PFR28_04561	0.30	-1.7
5,210,290	+		PFR28_04561	0.41	-1.0
5,210,290	+		PFR28_04561	0.41	+0.2
5,210,290	+		PFR28_04561	0.41	-1.6
5,210,290	+		PFR28_04561	0.41	-0.2
5,210,290	+		PFR28_04561	0.41	-0.7
5,210,290	+		PFR28_04561	0.41	+0.1
5,210,291	-		PFR28_04561	0.41	+0.2
5,210,291	-		PFR28_04561	0.41	+0.4
5,210,291	-		PFR28_04561	0.41	+0.1
5,210,291	-		PFR28_04561	0.41	-0.1
5,210,291	-		PFR28_04561	0.41	-1.5
5,210,291	-		PFR28_04561	0.41	-0.1
5,210,422	+		PFR28_04561	0.62	+0.7
5,210,422	+		PFR28_04561	0.62	-0.4
5,210,422	+		PFR28_04561	0.62	+0.4
5,210,422	+		PFR28_04561	0.62	-0.6
5,210,423	-		PFR28_04561	0.63	+0.5
5,210,423	-		PFR28_04561	0.63	-1.4
5,210,423	-		PFR28_04561	0.63	-0.2
5,210,423	-		PFR28_04561	0.63	+1.0
5,210,437	+		PFR28_04561	0.65	+0.3
5,210,437	+		PFR28_04561	0.65	+0.6
5,210,437	+		PFR28_04561	0.65	+0.4
5,210,437	+		PFR28_04561	0.65	-1.1
5,210,438	-		PFR28_04561	0.65	-0.3
5,210,438	-		PFR28_04561	0.65	-0.5
5,210,438	-		PFR28_04561	0.65	+0.2
5,210,466	+		PFR28_04561	0.69	+0.0
5,210,466	+		PFR28_04561	0.69	+1.6
5,210,639	-				-0.7
5,210,639	-				+0.3
5,210,777	+				+0.7
5,210,778	-				+0.7
5,210,875	+		PFR28_04562	0.10	+0.1
5,210,875	+		PFR28_04562	0.10	-0.3
5,210,875	+		PFR28_04562	0.10	+0.2
5,210,876	-		PFR28_04562	0.10	-0.9
5,210,876	-		PFR28_04562	0.10	-0.5
5,210,962	+		PFR28_04562	0.20	-0.3
5,210,963	-		PFR28_04562	0.20	+0.2
5,210,963	-		PFR28_04562	0.20	-0.3
5,210,963	-		PFR28_04562	0.20	-0.2
5,211,171	-		PFR28_04562	0.43	-0.3
5,211,171	-		PFR28_04562	0.43	-0.5
5,211,205	-		PFR28_04562	0.47	-1.0
5,211,335	-		PFR28_04562	0.61	-0.2
5,211,346	+		PFR28_04562	0.62	-0.0
5,211,347	-		PFR28_04562	0.62	-0.4
5,211,515	+		PFR28_04562	0.81	-1.2
5,211,515	+		PFR28_04562	0.81	+0.8
5,211,515	+		PFR28_04562	0.81	-0.9
5,211,515	+		PFR28_04562	0.81	+0.3
5,211,515	+		PFR28_04562	0.81	+0.5
5,211,515	+		PFR28_04562	0.81	-1.7
5,211,515	+		PFR28_04562	0.81	+0.5
5,211,516	-		PFR28_04562	0.81	-0.6
5,211,516	-		PFR28_04562	0.81	-0.2
5,211,516	-		PFR28_04562	0.81	+0.6
5,211,517	+		PFR28_04562	0.81	-0.6
5,211,517	+		PFR28_04562	0.81	+0.9
5,211,517	+		PFR28_04562	0.81	-0.6
5,211,517	+		PFR28_04562	0.81	-1.7
5,211,517	+		PFR28_04562	0.81	+0.4
5,211,517	+		PFR28_04562	0.81	-0.3
5,211,517	+		PFR28_04562	0.81	+0.3
5,211,517	+		PFR28_04562	0.81	-0.1
5,211,517	+		PFR28_04562	0.81	-0.5
5,211,517	+		PFR28_04562	0.81	-0.0
5,211,517	+		PFR28_04562	0.81	-1.7
5,211,517	+		PFR28_04562	0.81	-1.3
5,211,517	+		PFR28_04562	0.81	-1.2
5,211,517	+		PFR28_04562	0.81	+0.5
5,211,517	+		PFR28_04562	0.81	-2.7
5,211,517	+		PFR28_04562	0.81	-0.3
5,211,517	+		PFR28_04562	0.81	-0.4
5,211,517	+		PFR28_04562	0.81	-0.4
5,211,518	-		PFR28_04562	0.81	-0.1
5,211,518	-		PFR28_04562	0.81	+1.6
5,211,518	-		PFR28_04562	0.81	+2.0
5,211,518	-		PFR28_04562	0.81	-0.4
5,211,518	-		PFR28_04562	0.81	+0.4
5,211,518	-		PFR28_04562	0.81	-0.8
5,211,518	-		PFR28_04562	0.81	+0.1
5,211,518	-		PFR28_04562	0.81	+0.4
5,211,518	-		PFR28_04562	0.81	-1.5
5,211,518	-		PFR28_04562	0.81	-0.7
5,211,518	-		PFR28_04562	0.81	-0.1
5,211,518	-		PFR28_04562	0.81	-0.4
5,211,518	-		PFR28_04562	0.81	-0.1
5,211,518	-		PFR28_04562	0.81	-2.3
5,211,518	-		PFR28_04562	0.81	-2.4
5,211,518	-		PFR28_04562	0.81	+0.8
5,211,518	-		PFR28_04562	0.81	+0.7
5,211,518	-		PFR28_04562	0.81	-1.2
5,211,518	-		PFR28_04562	0.81	-0.1
5,211,524	+		PFR28_04562	0.82	-1.3
5,211,524	+		PFR28_04562	0.82	-0.1
5,211,524	+		PFR28_04562	0.82	-1.1
5,211,525	-		PFR28_04562	0.82	-0.2
5,211,525	-		PFR28_04562	0.82	+0.2
5,211,525	-		PFR28_04562	0.82	+0.1
5,211,525	-		PFR28_04562	0.82	-0.4
5,211,525	-		PFR28_04562	0.82	-0.3
5,211,537	+		PFR28_04562	0.83	-0.3
5,211,537	+		PFR28_04562	0.83	+0.1
5,211,543	+		PFR28_04562	0.84	-1.2
5,211,544	-		PFR28_04562	0.84	-1.5