Experiment: Uranyl Acetate Dihydrate 200 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_24130 and IAI46_24135 are separated by 107 nucleotides IAI46_24135 and IAI46_24140 are separated by 55 nucleotides
IAI46_24130: IAI46_24130 - virulence factor, at 5,140,975 to 5,143,173
_24130
IAI46_24135: IAI46_24135 - VOC family protein, at 5,143,281 to 5,143,691
_24135
IAI46_24140: IAI46_24140 - DUF1852 family protein, at 5,143,747 to 5,144,586
_24140
Position (kb)
5143
5144 Strain fitness (log2 ratio)
-2
-1
0
1 at 5142.591 kb on + strand, within IAI46_24130 at 5142.592 kb on - strand, within IAI46_24130 at 5142.754 kb on - strand, within IAI46_24130 at 5142.860 kb on + strand, within IAI46_24130 at 5142.860 kb on + strand, within IAI46_24130 at 5143.039 kb on + strand at 5143.039 kb on + strand at 5143.039 kb on + strand at 5143.039 kb on + strand at 5143.040 kb on - strand at 5143.040 kb on - strand at 5143.040 kb on - strand at 5143.040 kb on - strand at 5143.041 kb on + strand at 5143.041 kb on + strand at 5143.042 kb on - strand at 5143.045 kb on + strand at 5143.045 kb on + strand at 5143.045 kb on + strand at 5143.045 kb on + strand at 5143.046 kb on - strand at 5143.046 kb on - strand at 5143.046 kb on - strand at 5143.046 kb on - strand at 5143.046 kb on - strand at 5143.101 kb on + strand at 5143.101 kb on + strand at 5143.102 kb on - strand at 5143.140 kb on - strand at 5143.140 kb on - strand at 5143.194 kb on + strand at 5143.194 kb on + strand at 5143.194 kb on + strand at 5143.194 kb on + strand at 5143.195 kb on - strand at 5143.195 kb on - strand at 5143.195 kb on - strand at 5143.195 kb on - strand at 5143.199 kb on + strand at 5143.200 kb on - strand at 5143.200 kb on - strand at 5143.200 kb on - strand at 5143.200 kb on - strand at 5143.209 kb on - strand at 5143.239 kb on - strand at 5143.240 kb on + strand at 5143.240 kb on + strand at 5143.240 kb on + strand at 5143.243 kb on + strand at 5143.243 kb on + strand at 5143.243 kb on + strand at 5143.243 kb on + strand at 5143.244 kb on - strand at 5143.244 kb on - strand at 5143.244 kb on - strand at 5143.245 kb on + strand at 5143.245 kb on + strand at 5143.253 kb on - strand at 5143.253 kb on - strand at 5143.356 kb on + strand, within IAI46_24135 at 5143.359 kb on - strand, within IAI46_24135 at 5143.367 kb on - strand, within IAI46_24135 at 5143.558 kb on + strand, within IAI46_24135 at 5143.559 kb on - strand, within IAI46_24135 at 5143.563 kb on + strand, within IAI46_24135 at 5143.563 kb on + strand, within IAI46_24135 at 5143.563 kb on + strand, within IAI46_24135 at 5143.564 kb on - strand, within IAI46_24135 at 5143.564 kb on - strand, within IAI46_24135 at 5143.638 kb on + strand, within IAI46_24135 at 5143.689 kb on + strand at 5143.704 kb on - strand at 5143.704 kb on - strand at 5143.714 kb on - strand at 5143.714 kb on - strand at 5143.714 kb on - strand at 5143.742 kb on + strand at 5143.841 kb on - strand, within IAI46_24140 at 5143.991 kb on + strand, within IAI46_24140 at 5144.007 kb on - strand, within IAI46_24140 at 5144.060 kb on + strand, within IAI46_24140 at 5144.060 kb on + strand, within IAI46_24140 at 5144.060 kb on + strand, within IAI46_24140 at 5144.060 kb on + strand, within IAI46_24140 at 5144.060 kb on + strand, within IAI46_24140 at 5144.060 kb on + strand, within IAI46_24140 at 5144.060 kb on + strand, within IAI46_24140 at 5144.061 kb on - strand, within IAI46_24140 at 5144.061 kb on - strand, within IAI46_24140 at 5144.061 kb on - strand, within IAI46_24140 at 5144.064 kb on + strand, within IAI46_24140 at 5144.064 kb on + strand, within IAI46_24140 at 5144.064 kb on + strand, within IAI46_24140 at 5144.064 kb on + strand, within IAI46_24140 at 5144.065 kb on - strand, within IAI46_24140 at 5144.065 kb on - strand, within IAI46_24140 at 5144.065 kb on - strand, within IAI46_24140 at 5144.070 kb on + strand, within IAI46_24140 at 5144.070 kb on + strand, within IAI46_24140 at 5144.071 kb on - strand, within IAI46_24140 at 5144.071 kb on - strand, within IAI46_24140 at 5144.121 kb on - strand, within IAI46_24140 at 5144.202 kb on + strand, within IAI46_24140 at 5144.202 kb on + strand, within IAI46_24140 at 5144.202 kb on + strand, within IAI46_24140 at 5144.203 kb on - strand, within IAI46_24140 at 5144.203 kb on - strand, within IAI46_24140 at 5144.232 kb on - strand, within IAI46_24140 at 5144.313 kb on - strand, within IAI46_24140 at 5144.321 kb on - strand, within IAI46_24140 at 5144.321 kb on - strand, within IAI46_24140 at 5144.408 kb on + strand, within IAI46_24140 at 5144.409 kb on - strand, within IAI46_24140 at 5144.487 kb on + strand, within IAI46_24140 at 5144.488 kb on - strand, within IAI46_24140 at 5144.553 kb on + strand at 5144.554 kb on - strand at 5144.554 kb on - strand at 5144.554 kb on - strand at 5144.554 kb on - strand at 5144.558 kb on - strand at 5144.558 kb on - strand at 5144.558 kb on - strand at 5144.589 kb on + strand at 5144.590 kb on - strand at 5144.621 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Uranyl Acetate Dihydrate 200 uM, aerobic remove 5,142,591 + IAI46_24130 0.73 +0.9 5,142,592 - IAI46_24130 0.74 +0.2 5,142,754 - IAI46_24130 0.81 -0.8 5,142,860 + IAI46_24130 0.86 +0.3 5,142,860 + IAI46_24130 0.86 -0.5 5,143,039 + -0.7 5,143,039 + -0.3 5,143,039 + -0.9 5,143,039 + -0.0 5,143,040 - +0.6 5,143,040 - -1.3 5,143,040 - +0.4 5,143,040 - +0.0 5,143,041 + +0.4 5,143,041 + +1.1 5,143,042 - +0.4 5,143,045 + -0.0 5,143,045 + +0.1 5,143,045 + +0.0 5,143,045 + -0.4 5,143,046 - +0.3 5,143,046 - +0.5 5,143,046 - -0.8 5,143,046 - +1.1 5,143,046 - -0.1 5,143,101 + -0.5 5,143,101 + -0.2 5,143,102 - +0.3 5,143,140 - -0.3 5,143,140 - +0.4 5,143,194 + +1.4 5,143,194 + -0.0 5,143,194 + +0.5 5,143,194 + -0.9 5,143,195 - +0.6 5,143,195 - +1.4 5,143,195 - +0.1 5,143,195 - +0.5 5,143,199 + +0.9 5,143,200 - +1.0 5,143,200 - +0.7 5,143,200 - +1.6 5,143,200 - +1.0 5,143,209 - +0.7 5,143,239 - +0.2 5,143,240 + +1.2 5,143,240 + -0.1 5,143,240 + -0.9 5,143,243 + +0.4 5,143,243 + -0.2 5,143,243 + +0.7 5,143,243 + -0.2 5,143,244 - +0.4 5,143,244 - +0.0 5,143,244 - -0.0 5,143,245 + -0.2 5,143,245 + +1.1 5,143,253 - -0.1 5,143,253 - -0.5 5,143,356 + IAI46_24135 0.18 -0.3 5,143,359 - IAI46_24135 0.19 -0.9 5,143,367 - IAI46_24135 0.21 -0.0 5,143,558 + IAI46_24135 0.67 -0.1 5,143,559 - IAI46_24135 0.68 +0.2 5,143,563 + IAI46_24135 0.69 -0.4 5,143,563 + IAI46_24135 0.69 -0.4 5,143,563 + IAI46_24135 0.69 +1.2 5,143,564 - IAI46_24135 0.69 +0.0 5,143,564 - IAI46_24135 0.69 -1.2 5,143,638 + IAI46_24135 0.87 -0.1 5,143,689 + +0.5 5,143,704 - -1.0 5,143,704 - +0.8 5,143,714 - +0.3 5,143,714 - +0.0 5,143,714 - -0.5 5,143,742 + -0.2 5,143,841 - IAI46_24140 0.11 +0.6 5,143,991 + IAI46_24140 0.29 -0.1 5,144,007 - IAI46_24140 0.31 +0.3 5,144,060 + IAI46_24140 0.37 +0.6 5,144,060 + IAI46_24140 0.37 -0.3 5,144,060 + IAI46_24140 0.37 +0.7 5,144,060 + IAI46_24140 0.37 -1.8 5,144,060 + IAI46_24140 0.37 -0.1 5,144,060 + IAI46_24140 0.37 -0.1 5,144,060 + IAI46_24140 0.37 +0.6 5,144,061 - IAI46_24140 0.37 +1.1 5,144,061 - IAI46_24140 0.37 -0.1 5,144,061 - IAI46_24140 0.37 -0.7 5,144,064 + IAI46_24140 0.38 +0.2 5,144,064 + IAI46_24140 0.38 -0.1 5,144,064 + IAI46_24140 0.38 +0.1 5,144,064 + IAI46_24140 0.38 +0.5 5,144,065 - IAI46_24140 0.38 -0.0 5,144,065 - IAI46_24140 0.38 +0.2 5,144,065 - IAI46_24140 0.38 +1.5 5,144,070 + IAI46_24140 0.38 +0.3 5,144,070 + IAI46_24140 0.38 -0.2 5,144,071 - IAI46_24140 0.39 +1.2 5,144,071 - IAI46_24140 0.39 +0.6 5,144,121 - IAI46_24140 0.45 +0.6 5,144,202 + IAI46_24140 0.54 -0.1 5,144,202 + IAI46_24140 0.54 +0.3 5,144,202 + IAI46_24140 0.54 +0.1 5,144,203 - IAI46_24140 0.54 +0.2 5,144,203 - IAI46_24140 0.54 +0.4 5,144,232 - IAI46_24140 0.58 +0.5 5,144,313 - IAI46_24140 0.67 +0.8 5,144,321 - IAI46_24140 0.68 +0.2 5,144,321 - IAI46_24140 0.68 +0.5 5,144,408 + IAI46_24140 0.79 -0.1 5,144,409 - IAI46_24140 0.79 -0.1 5,144,487 + IAI46_24140 0.88 -0.4 5,144,488 - IAI46_24140 0.88 +0.4 5,144,553 + +0.8 5,144,554 - -0.8 5,144,554 - +1.1 5,144,554 - +0.1 5,144,554 - +0.5 5,144,558 - +1.4 5,144,558 - +0.9 5,144,558 - -0.2 5,144,589 + +1.3 5,144,590 - +0.0 5,144,621 - -1.0
Or see this region's nucleotide sequence