Experiment: Uranyl Acetate Dihydrate 200 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_23870 and IAI46_23875 are separated by 13 nucleotides IAI46_23875 and IAI46_23880 are separated by 10 nucleotides IAI46_23880 and IAI46_23885 are separated by 12 nucleotides
IAI46_23870: IAI46_23870 - 3-keto-L-gulonate-6-phosphate decarboxylase UlaD, at 5,079,000 to 5,079,656
_23870
IAI46_23875: IAI46_23875 - PTS ascorbate transporter subunit IIA, at 5,079,670 to 5,080,143
_23875
IAI46_23880: IAI46_23880 - PTS ascorbate transporter subunit IIB, at 5,080,154 to 5,080,462
_23880
IAI46_23885: IAI46_23885 - PTS ascorbate transporter subunit IIC, at 5,080,475 to 5,081,872
_23885
Position (kb)
5080
5081 Strain fitness (log2 ratio)
-1
0
1
2 at 5079.247 kb on + strand, within IAI46_23870 at 5079.371 kb on + strand, within IAI46_23870 at 5079.372 kb on - strand, within IAI46_23870 at 5079.461 kb on + strand, within IAI46_23870 at 5079.474 kb on + strand, within IAI46_23870 at 5079.475 kb on - strand, within IAI46_23870 at 5079.491 kb on - strand, within IAI46_23870 at 5079.491 kb on - strand, within IAI46_23870 at 5079.590 kb on + strand, within IAI46_23870 at 5079.590 kb on + strand, within IAI46_23870 at 5079.591 kb on - strand at 5079.591 kb on - strand at 5079.591 kb on - strand at 5079.591 kb on - strand at 5079.591 kb on - strand at 5079.595 kb on + strand at 5079.595 kb on + strand at 5079.595 kb on + strand at 5079.595 kb on + strand at 5079.595 kb on + strand at 5079.596 kb on - strand at 5079.596 kb on - strand at 5079.596 kb on - strand at 5079.596 kb on - strand at 5079.638 kb on + strand at 5079.638 kb on + strand at 5079.638 kb on + strand at 5079.642 kb on + strand at 5079.642 kb on + strand at 5079.642 kb on + strand at 5079.642 kb on + strand at 5079.643 kb on - strand at 5079.643 kb on - strand at 5079.643 kb on - strand at 5079.643 kb on - strand at 5079.706 kb on + strand at 5079.778 kb on + strand, within IAI46_23875 at 5079.779 kb on - strand, within IAI46_23875 at 5079.779 kb on - strand, within IAI46_23875 at 5079.810 kb on + strand, within IAI46_23875 at 5079.843 kb on + strand, within IAI46_23875 at 5079.843 kb on + strand, within IAI46_23875 at 5079.919 kb on + strand, within IAI46_23875 at 5080.016 kb on + strand, within IAI46_23875 at 5080.231 kb on + strand, within IAI46_23880 at 5080.231 kb on + strand, within IAI46_23880 at 5080.232 kb on - strand, within IAI46_23880 at 5080.232 kb on - strand, within IAI46_23880 at 5080.251 kb on + strand, within IAI46_23880 at 5080.251 kb on + strand, within IAI46_23880 at 5080.251 kb on + strand, within IAI46_23880 at 5080.251 kb on + strand, within IAI46_23880 at 5080.251 kb on + strand, within IAI46_23880 at 5080.251 kb on + strand, within IAI46_23880 at 5080.251 kb on + strand, within IAI46_23880 at 5080.252 kb on - strand, within IAI46_23880 at 5080.252 kb on - strand, within IAI46_23880 at 5080.252 kb on - strand, within IAI46_23880 at 5080.332 kb on + strand, within IAI46_23880 at 5080.361 kb on - strand, within IAI46_23880 at 5080.361 kb on - strand, within IAI46_23880 at 5080.361 kb on - strand, within IAI46_23880 at 5080.361 kb on - strand, within IAI46_23880 at 5080.476 kb on + strand at 5080.551 kb on + strand at 5080.551 kb on + strand at 5080.552 kb on - strand at 5080.583 kb on - strand at 5080.583 kb on - strand at 5080.844 kb on + strand, within IAI46_23885 at 5080.882 kb on + strand, within IAI46_23885 at 5080.882 kb on + strand, within IAI46_23885 at 5080.883 kb on - strand, within IAI46_23885 at 5080.883 kb on - strand, within IAI46_23885 at 5080.883 kb on - strand, within IAI46_23885 at 5080.883 kb on - strand, within IAI46_23885 at 5080.915 kb on + strand, within IAI46_23885 at 5080.915 kb on + strand, within IAI46_23885 at 5080.917 kb on + strand, within IAI46_23885 at 5080.917 kb on + strand, within IAI46_23885 at 5080.918 kb on - strand, within IAI46_23885 at 5081.070 kb on + strand, within IAI46_23885 at 5081.070 kb on + strand, within IAI46_23885 at 5081.071 kb on - strand, within IAI46_23885 at 5081.247 kb on + strand, within IAI46_23885 at 5081.263 kb on - strand, within IAI46_23885 at 5081.300 kb on - strand, within IAI46_23885 at 5081.367 kb on + strand, within IAI46_23885 at 5081.368 kb on - strand, within IAI46_23885 at 5081.368 kb on - strand, within IAI46_23885 at 5081.396 kb on + strand, within IAI46_23885 at 5081.428 kb on - strand, within IAI46_23885 at 5081.436 kb on - strand, within IAI46_23885
Per-strain Table
Position Strand Gene LocusTag Fraction Uranyl Acetate Dihydrate 200 uM, aerobic remove 5,079,247 + IAI46_23870 0.38 +0.5 5,079,371 + IAI46_23870 0.56 +0.3 5,079,372 - IAI46_23870 0.57 -0.4 5,079,461 + IAI46_23870 0.70 -0.8 5,079,474 + IAI46_23870 0.72 -0.5 5,079,475 - IAI46_23870 0.72 -1.0 5,079,491 - IAI46_23870 0.75 +0.2 5,079,491 - IAI46_23870 0.75 +0.3 5,079,590 + IAI46_23870 0.90 +0.7 5,079,590 + IAI46_23870 0.90 +0.2 5,079,591 - +1.0 5,079,591 - +0.6 5,079,591 - +0.2 5,079,591 - +0.6 5,079,591 - +0.3 5,079,595 + -0.2 5,079,595 + +0.0 5,079,595 + +0.4 5,079,595 + +0.3 5,079,595 + +0.5 5,079,596 - +0.4 5,079,596 - -0.6 5,079,596 - +0.6 5,079,596 - +0.0 5,079,638 + -0.2 5,079,638 + +0.8 5,079,638 + -0.6 5,079,642 + -0.3 5,079,642 + -0.8 5,079,642 + -0.3 5,079,642 + +0.4 5,079,643 - -0.3 5,079,643 - -0.1 5,079,643 - +1.6 5,079,643 - +0.6 5,079,706 + +0.1 5,079,778 + IAI46_23875 0.23 -0.8 5,079,779 - IAI46_23875 0.23 +0.4 5,079,779 - IAI46_23875 0.23 -0.3 5,079,810 + IAI46_23875 0.30 -0.7 5,079,843 + IAI46_23875 0.36 +0.3 5,079,843 + IAI46_23875 0.36 +0.1 5,079,919 + IAI46_23875 0.53 -1.2 5,080,016 + IAI46_23875 0.73 +0.0 5,080,231 + IAI46_23880 0.25 +0.1 5,080,231 + IAI46_23880 0.25 -0.4 5,080,232 - IAI46_23880 0.25 +0.5 5,080,232 - IAI46_23880 0.25 +0.0 5,080,251 + IAI46_23880 0.31 +0.6 5,080,251 + IAI46_23880 0.31 +0.1 5,080,251 + IAI46_23880 0.31 +0.0 5,080,251 + IAI46_23880 0.31 +0.3 5,080,251 + IAI46_23880 0.31 +2.0 5,080,251 + IAI46_23880 0.31 -0.0 5,080,251 + IAI46_23880 0.31 -0.4 5,080,252 - IAI46_23880 0.32 +1.2 5,080,252 - IAI46_23880 0.32 -0.0 5,080,252 - IAI46_23880 0.32 +0.7 5,080,332 + IAI46_23880 0.58 +0.2 5,080,361 - IAI46_23880 0.67 +0.3 5,080,361 - IAI46_23880 0.67 -0.2 5,080,361 - IAI46_23880 0.67 +0.1 5,080,361 - IAI46_23880 0.67 -0.3 5,080,476 + +0.9 5,080,551 + -0.5 5,080,551 + +0.1 5,080,552 - -0.7 5,080,583 - +0.0 5,080,583 - +0.2 5,080,844 + IAI46_23885 0.26 -0.4 5,080,882 + IAI46_23885 0.29 +0.9 5,080,882 + IAI46_23885 0.29 +0.9 5,080,883 - IAI46_23885 0.29 +0.5 5,080,883 - IAI46_23885 0.29 -0.3 5,080,883 - IAI46_23885 0.29 -0.3 5,080,883 - IAI46_23885 0.29 +0.4 5,080,915 + IAI46_23885 0.31 +1.0 5,080,915 + IAI46_23885 0.31 -0.0 5,080,917 + IAI46_23885 0.32 +0.7 5,080,917 + IAI46_23885 0.32 +0.3 5,080,918 - IAI46_23885 0.32 -1.0 5,081,070 + IAI46_23885 0.43 -1.5 5,081,070 + IAI46_23885 0.43 -1.0 5,081,071 - IAI46_23885 0.43 -0.2 5,081,247 + IAI46_23885 0.55 -0.6 5,081,263 - IAI46_23885 0.56 -0.4 5,081,300 - IAI46_23885 0.59 +0.2 5,081,367 + IAI46_23885 0.64 -0.1 5,081,368 - IAI46_23885 0.64 +0.6 5,081,368 - IAI46_23885 0.64 +0.1 5,081,396 + IAI46_23885 0.66 +1.2 5,081,428 - IAI46_23885 0.68 +0.1 5,081,436 - IAI46_23885 0.69 +0.8
Or see this region's nucleotide sequence