Experiment: Uranyl Acetate Dihydrate 200 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_23770 and IAI46_23775 are separated by 126 nucleotides IAI46_23775 and IAI46_23780 overlap by 4 nucleotides IAI46_23780 and IAI46_23785 are separated by 34 nucleotides
IAI46_23770: IAI46_23770 - phosphoenolpyruvate carboxykinase (ATP), at 5,054,622 to 5,056,241
_23770
IAI46_23775: IAI46_23775 - plasmid stabilization protein, at 5,056,368 to 5,056,631
_23775
IAI46_23780: IAI46_23780 - type II toxin-antitoxin system VapC family toxin, at 5,056,628 to 5,057,107
_23780
IAI46_23785: IAI46_23785 - two-component system sensor histidine kinase EnvZ, at 5,057,142 to 5,058,512
_23785
Position (kb)
5056
5057
5058 Strain fitness (log2 ratio)
-2
-1
0
1 at 5055.633 kb on + strand, within IAI46_23770 at 5055.760 kb on - strand, within IAI46_23770 at 5055.880 kb on - strand, within IAI46_23770 at 5055.980 kb on + strand, within IAI46_23770 at 5055.981 kb on - strand, within IAI46_23770 at 5055.981 kb on - strand, within IAI46_23770 at 5055.981 kb on - strand, within IAI46_23770 at 5055.981 kb on - strand, within IAI46_23770 at 5056.037 kb on + strand, within IAI46_23770 at 5056.038 kb on - strand, within IAI46_23770 at 5056.038 kb on - strand, within IAI46_23770 at 5056.038 kb on - strand, within IAI46_23770 at 5056.046 kb on + strand, within IAI46_23770 at 5056.046 kb on + strand, within IAI46_23770 at 5056.047 kb on - strand, within IAI46_23770 at 5056.117 kb on - strand at 5056.188 kb on + strand at 5056.189 kb on - strand at 5056.189 kb on - strand at 5056.189 kb on - strand at 5056.240 kb on - strand at 5056.240 kb on - strand at 5056.242 kb on + strand at 5056.253 kb on + strand at 5056.253 kb on + strand at 5056.253 kb on + strand at 5056.265 kb on + strand at 5056.265 kb on + strand at 5056.265 kb on + strand at 5056.265 kb on + strand at 5056.266 kb on - strand at 5056.266 kb on - strand at 5056.328 kb on + strand at 5056.328 kb on + strand at 5056.329 kb on - strand at 5056.329 kb on - strand at 5056.332 kb on - strand at 5056.373 kb on + strand at 5056.374 kb on - strand at 5056.378 kb on + strand at 5056.405 kb on + strand, within IAI46_23775 at 5056.406 kb on - strand, within IAI46_23775 at 5056.486 kb on + strand, within IAI46_23775 at 5056.486 kb on + strand, within IAI46_23775 at 5056.627 kb on + strand at 5056.627 kb on + strand at 5056.628 kb on - strand at 5056.628 kb on - strand at 5056.643 kb on - strand at 5056.682 kb on + strand, within IAI46_23780 at 5056.682 kb on + strand, within IAI46_23780 at 5056.682 kb on + strand, within IAI46_23780 at 5056.683 kb on - strand, within IAI46_23780 at 5056.683 kb on - strand, within IAI46_23780 at 5056.683 kb on - strand, within IAI46_23780 at 5056.683 kb on - strand, within IAI46_23780 at 5056.684 kb on + strand, within IAI46_23780 at 5056.684 kb on + strand, within IAI46_23780 at 5056.684 kb on + strand, within IAI46_23780 at 5056.685 kb on - strand, within IAI46_23780 at 5056.685 kb on - strand, within IAI46_23780 at 5056.685 kb on - strand, within IAI46_23780 at 5056.727 kb on + strand, within IAI46_23780 at 5056.727 kb on + strand, within IAI46_23780 at 5056.728 kb on - strand, within IAI46_23780 at 5056.740 kb on + strand, within IAI46_23780 at 5056.741 kb on - strand, within IAI46_23780 at 5056.741 kb on - strand, within IAI46_23780 at 5056.741 kb on - strand, within IAI46_23780 at 5056.741 kb on - strand, within IAI46_23780 at 5056.741 kb on - strand, within IAI46_23780 at 5056.775 kb on - strand, within IAI46_23780 at 5056.864 kb on + strand, within IAI46_23780 at 5056.884 kb on - strand, within IAI46_23780 at 5056.967 kb on + strand, within IAI46_23780 at 5056.968 kb on - strand, within IAI46_23780 at 5056.968 kb on - strand, within IAI46_23780 at 5056.993 kb on + strand, within IAI46_23780 at 5057.081 kb on + strand at 5057.081 kb on + strand at 5057.084 kb on + strand at 5057.084 kb on + strand at 5057.085 kb on - strand at 5057.085 kb on - strand at 5057.085 kb on - strand at 5057.143 kb on + strand at 5057.144 kb on - strand at 5057.208 kb on - strand at 5057.208 kb on - strand at 5057.208 kb on - strand at 5057.208 kb on - strand at 5057.208 kb on - strand at 5057.209 kb on + strand at 5057.209 kb on + strand at 5057.279 kb on + strand, within IAI46_23785 at 5057.279 kb on + strand, within IAI46_23785 at 5057.280 kb on - strand, within IAI46_23785 at 5057.280 kb on - strand, within IAI46_23785 at 5057.280 kb on - strand, within IAI46_23785 at 5057.280 kb on - strand, within IAI46_23785 at 5057.280 kb on - strand, within IAI46_23785 at 5057.286 kb on + strand, within IAI46_23785 at 5057.287 kb on - strand, within IAI46_23785 at 5057.378 kb on + strand, within IAI46_23785 at 5057.483 kb on + strand, within IAI46_23785 at 5057.483 kb on + strand, within IAI46_23785 at 5057.484 kb on - strand, within IAI46_23785 at 5057.569 kb on + strand, within IAI46_23785 at 5057.570 kb on - strand, within IAI46_23785 at 5057.654 kb on - strand, within IAI46_23785 at 5057.660 kb on + strand, within IAI46_23785 at 5057.693 kb on + strand, within IAI46_23785 at 5057.694 kb on - strand, within IAI46_23785 at 5057.699 kb on + strand, within IAI46_23785 at 5057.700 kb on - strand, within IAI46_23785 at 5057.720 kb on - strand, within IAI46_23785 at 5057.890 kb on + strand, within IAI46_23785 at 5057.973 kb on - strand, within IAI46_23785 at 5057.997 kb on + strand, within IAI46_23785 at 5057.997 kb on + strand, within IAI46_23785 at 5057.997 kb on + strand, within IAI46_23785 at 5057.998 kb on - strand, within IAI46_23785 at 5057.998 kb on - strand, within IAI46_23785 at 5058.011 kb on + strand, within IAI46_23785 at 5058.012 kb on - strand, within IAI46_23785 at 5058.023 kb on + strand, within IAI46_23785 at 5058.024 kb on - strand, within IAI46_23785 at 5058.024 kb on - strand, within IAI46_23785 at 5058.024 kb on - strand, within IAI46_23785 at 5058.024 kb on - strand, within IAI46_23785
Per-strain Table
Position Strand Gene LocusTag Fraction Uranyl Acetate Dihydrate 200 uM, aerobic remove 5,055,633 + IAI46_23770 0.62 -0.1 5,055,760 - IAI46_23770 0.70 +0.0 5,055,880 - IAI46_23770 0.78 -0.2 5,055,980 + IAI46_23770 0.84 +0.5 5,055,981 - IAI46_23770 0.84 +0.7 5,055,981 - IAI46_23770 0.84 -0.1 5,055,981 - IAI46_23770 0.84 -0.2 5,055,981 - IAI46_23770 0.84 -0.1 5,056,037 + IAI46_23770 0.87 +0.3 5,056,038 - IAI46_23770 0.87 -1.0 5,056,038 - IAI46_23770 0.87 +0.9 5,056,038 - IAI46_23770 0.87 -1.0 5,056,046 + IAI46_23770 0.88 -0.2 5,056,046 + IAI46_23770 0.88 -0.5 5,056,047 - IAI46_23770 0.88 -1.2 5,056,117 - -0.7 5,056,188 + +0.2 5,056,189 - -0.2 5,056,189 - +0.9 5,056,189 - -0.2 5,056,240 - +0.8 5,056,240 - -0.3 5,056,242 + -0.3 5,056,253 + -0.4 5,056,253 + -0.3 5,056,253 + +0.1 5,056,265 + +0.1 5,056,265 + -0.6 5,056,265 + -0.1 5,056,265 + +0.3 5,056,266 - +0.3 5,056,266 - +0.3 5,056,328 + +0.2 5,056,328 + -0.6 5,056,329 - -2.1 5,056,329 - +0.5 5,056,332 - -0.0 5,056,373 + -0.4 5,056,374 - -0.4 5,056,378 + +0.5 5,056,405 + IAI46_23775 0.14 +0.8 5,056,406 - IAI46_23775 0.14 +0.6 5,056,486 + IAI46_23775 0.45 -0.5 5,056,486 + IAI46_23775 0.45 +0.5 5,056,627 + +0.3 5,056,627 + -0.1 5,056,628 - +1.2 5,056,628 - -0.0 5,056,643 - +1.2 5,056,682 + IAI46_23780 0.11 -0.6 5,056,682 + IAI46_23780 0.11 -0.7 5,056,682 + IAI46_23780 0.11 +0.3 5,056,683 - IAI46_23780 0.11 -0.2 5,056,683 - IAI46_23780 0.11 -0.3 5,056,683 - IAI46_23780 0.11 +0.3 5,056,683 - IAI46_23780 0.11 -0.4 5,056,684 + IAI46_23780 0.12 +0.0 5,056,684 + IAI46_23780 0.12 +0.3 5,056,684 + IAI46_23780 0.12 +1.5 5,056,685 - IAI46_23780 0.12 -0.0 5,056,685 - IAI46_23780 0.12 +0.3 5,056,685 - IAI46_23780 0.12 -1.8 5,056,727 + IAI46_23780 0.21 +1.0 5,056,727 + IAI46_23780 0.21 -0.1 5,056,728 - IAI46_23780 0.21 +0.6 5,056,740 + IAI46_23780 0.23 +0.4 5,056,741 - IAI46_23780 0.24 -0.7 5,056,741 - IAI46_23780 0.24 -2.5 5,056,741 - IAI46_23780 0.24 +0.2 5,056,741 - IAI46_23780 0.24 -0.6 5,056,741 - IAI46_23780 0.24 -0.9 5,056,775 - IAI46_23780 0.31 +0.8 5,056,864 + IAI46_23780 0.49 +0.1 5,056,884 - IAI46_23780 0.53 +0.4 5,056,967 + IAI46_23780 0.71 +0.1 5,056,968 - IAI46_23780 0.71 -0.9 5,056,968 - IAI46_23780 0.71 -0.1 5,056,993 + IAI46_23780 0.76 +0.7 5,057,081 + +0.6 5,057,081 + +0.1 5,057,084 + +0.5 5,057,084 + -0.5 5,057,085 - -1.0 5,057,085 - -0.6 5,057,085 - -0.4 5,057,143 + +0.0 5,057,144 - -1.1 5,057,208 - -0.0 5,057,208 - +0.4 5,057,208 - -0.3 5,057,208 - +0.0 5,057,208 - -0.6 5,057,209 + +1.0 5,057,209 + +0.6 5,057,279 + IAI46_23785 0.10 +0.7 5,057,279 + IAI46_23785 0.10 +0.1 5,057,280 - IAI46_23785 0.10 -1.3 5,057,280 - IAI46_23785 0.10 +0.2 5,057,280 - IAI46_23785 0.10 +0.6 5,057,280 - IAI46_23785 0.10 +0.7 5,057,280 - IAI46_23785 0.10 +0.3 5,057,286 + IAI46_23785 0.11 -0.4 5,057,287 - IAI46_23785 0.11 -2.1 5,057,378 + IAI46_23785 0.17 -1.7 5,057,483 + IAI46_23785 0.25 -1.0 5,057,483 + IAI46_23785 0.25 -0.3 5,057,484 - IAI46_23785 0.25 +0.1 5,057,569 + IAI46_23785 0.31 +1.0 5,057,570 - IAI46_23785 0.31 +0.6 5,057,654 - IAI46_23785 0.37 +0.7 5,057,660 + IAI46_23785 0.38 -0.5 5,057,693 + IAI46_23785 0.40 +0.3 5,057,694 - IAI46_23785 0.40 +0.7 5,057,699 + IAI46_23785 0.41 -0.8 5,057,700 - IAI46_23785 0.41 -0.3 5,057,720 - IAI46_23785 0.42 -0.6 5,057,890 + IAI46_23785 0.55 -0.1 5,057,973 - IAI46_23785 0.61 +0.4 5,057,997 + IAI46_23785 0.62 +0.1 5,057,997 + IAI46_23785 0.62 -1.7 5,057,997 + IAI46_23785 0.62 +0.1 5,057,998 - IAI46_23785 0.62 +1.3 5,057,998 - IAI46_23785 0.62 -0.2 5,058,011 + IAI46_23785 0.63 +0.4 5,058,012 - IAI46_23785 0.63 -0.3 5,058,023 + IAI46_23785 0.64 -0.3 5,058,024 - IAI46_23785 0.64 +0.5 5,058,024 - IAI46_23785 0.64 -0.4 5,058,024 - IAI46_23785 0.64 +0.1 5,058,024 - IAI46_23785 0.64 -0.7
Or see this region's nucleotide sequence