Experiment: Uranyl Acetate Dihydrate 200 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_19925 and IAI46_19930 are separated by 5 nucleotides IAI46_19930 and IAI46_19935 are separated by 134 nucleotides
IAI46_19925: IAI46_19925 - LysR family transcriptional regulator, at 4,200,528 to 4,201,421
_19925
IAI46_19930: IAI46_19930 - MBL fold metallo-hydrolase, at 4,201,427 to 4,202,371
_19930
IAI46_19935: IAI46_19935 - 2-hydroxycarboxylate transporter family protein, at 4,202,506 to 4,203,861
_19935
Position (kb)
4201
4202
4203 Strain fitness (log2 ratio)
-1
0
1 at 4200.439 kb on + strand at 4200.439 kb on + strand at 4200.439 kb on + strand at 4200.440 kb on - strand at 4200.524 kb on - strand at 4200.584 kb on + strand at 4200.720 kb on + strand, within IAI46_19925 at 4200.720 kb on + strand, within IAI46_19925 at 4200.721 kb on - strand, within IAI46_19925 at 4200.723 kb on + strand, within IAI46_19925 at 4200.724 kb on - strand, within IAI46_19925 at 4200.724 kb on - strand, within IAI46_19925 at 4200.917 kb on - strand, within IAI46_19925 at 4200.917 kb on - strand, within IAI46_19925 at 4200.978 kb on - strand, within IAI46_19925 at 4200.978 kb on - strand, within IAI46_19925 at 4201.137 kb on - strand, within IAI46_19925 at 4201.338 kb on + strand at 4201.420 kb on - strand at 4201.428 kb on + strand at 4201.428 kb on + strand at 4201.429 kb on - strand at 4201.441 kb on - strand at 4201.462 kb on - strand at 4201.477 kb on + strand at 4201.485 kb on + strand at 4201.486 kb on - strand at 4201.486 kb on - strand at 4201.544 kb on - strand, within IAI46_19930 at 4201.549 kb on + strand, within IAI46_19930 at 4201.591 kb on + strand, within IAI46_19930 at 4201.692 kb on + strand, within IAI46_19930 at 4201.693 kb on - strand, within IAI46_19930 at 4201.712 kb on - strand, within IAI46_19930 at 4201.763 kb on - strand, within IAI46_19930 at 4201.763 kb on - strand, within IAI46_19930 at 4201.969 kb on + strand, within IAI46_19930 at 4201.969 kb on + strand, within IAI46_19930 at 4201.970 kb on - strand, within IAI46_19930 at 4201.980 kb on + strand, within IAI46_19930 at 4202.027 kb on + strand, within IAI46_19930 at 4202.113 kb on - strand, within IAI46_19930 at 4202.113 kb on - strand, within IAI46_19930 at 4202.120 kb on - strand, within IAI46_19930 at 4202.120 kb on - strand, within IAI46_19930 at 4202.250 kb on + strand, within IAI46_19930 at 4202.250 kb on + strand, within IAI46_19930 at 4202.251 kb on - strand, within IAI46_19930 at 4202.329 kb on + strand at 4202.356 kb on - strand at 4202.403 kb on + strand at 4202.403 kb on + strand at 4202.403 kb on + strand at 4202.403 kb on + strand at 4202.404 kb on - strand at 4202.527 kb on + strand at 4202.528 kb on - strand at 4202.571 kb on + strand at 4202.572 kb on - strand at 4202.572 kb on - strand at 4202.575 kb on + strand at 4202.576 kb on - strand at 4202.576 kb on - strand at 4202.601 kb on + strand at 4202.601 kb on + strand at 4202.601 kb on + strand at 4202.602 kb on - strand at 4202.802 kb on + strand, within IAI46_19935 at 4202.802 kb on + strand, within IAI46_19935 at 4202.835 kb on - strand, within IAI46_19935 at 4202.984 kb on - strand, within IAI46_19935 at 4202.990 kb on + strand, within IAI46_19935 at 4202.990 kb on + strand, within IAI46_19935 at 4202.991 kb on - strand, within IAI46_19935 at 4202.991 kb on - strand, within IAI46_19935 at 4202.991 kb on - strand, within IAI46_19935 at 4202.991 kb on - strand, within IAI46_19935 at 4202.995 kb on + strand, within IAI46_19935 at 4202.995 kb on + strand, within IAI46_19935 at 4202.996 kb on - strand, within IAI46_19935 at 4202.996 kb on - strand, within IAI46_19935 at 4202.996 kb on - strand, within IAI46_19935 at 4202.996 kb on - strand, within IAI46_19935 at 4203.228 kb on + strand, within IAI46_19935 at 4203.228 kb on + strand, within IAI46_19935
Per-strain Table
Position Strand Gene LocusTag Fraction Uranyl Acetate Dihydrate 200 uM, aerobic remove 4,200,439 + +0.1 4,200,439 + +0.2 4,200,439 + +0.0 4,200,440 - -0.5 4,200,524 - +0.5 4,200,584 + -0.8 4,200,720 + IAI46_19925 0.21 +0.5 4,200,720 + IAI46_19925 0.21 +0.6 4,200,721 - IAI46_19925 0.22 +0.6 4,200,723 + IAI46_19925 0.22 +0.6 4,200,724 - IAI46_19925 0.22 +0.9 4,200,724 - IAI46_19925 0.22 +0.8 4,200,917 - IAI46_19925 0.44 -0.1 4,200,917 - IAI46_19925 0.44 -0.0 4,200,978 - IAI46_19925 0.50 -0.1 4,200,978 - IAI46_19925 0.50 -0.2 4,201,137 - IAI46_19925 0.68 +0.1 4,201,338 + -0.6 4,201,420 - +0.3 4,201,428 + +0.1 4,201,428 + +0.2 4,201,429 - +0.3 4,201,441 - -0.3 4,201,462 - +0.2 4,201,477 + -0.3 4,201,485 + -0.3 4,201,486 - -1.1 4,201,486 - +0.8 4,201,544 - IAI46_19930 0.12 +0.4 4,201,549 + IAI46_19930 0.13 -0.9 4,201,591 + IAI46_19930 0.17 +0.3 4,201,692 + IAI46_19930 0.28 +0.4 4,201,693 - IAI46_19930 0.28 -1.0 4,201,712 - IAI46_19930 0.30 -0.2 4,201,763 - IAI46_19930 0.36 +0.8 4,201,763 - IAI46_19930 0.36 +0.0 4,201,969 + IAI46_19930 0.57 +0.5 4,201,969 + IAI46_19930 0.57 +1.2 4,201,970 - IAI46_19930 0.57 -0.4 4,201,980 + IAI46_19930 0.59 +1.5 4,202,027 + IAI46_19930 0.63 -0.1 4,202,113 - IAI46_19930 0.73 +1.1 4,202,113 - IAI46_19930 0.73 -0.2 4,202,120 - IAI46_19930 0.73 -0.2 4,202,120 - IAI46_19930 0.73 +0.6 4,202,250 + IAI46_19930 0.87 -1.4 4,202,250 + IAI46_19930 0.87 +0.7 4,202,251 - IAI46_19930 0.87 -0.2 4,202,329 + +0.6 4,202,356 - -0.4 4,202,403 + -0.1 4,202,403 + -0.1 4,202,403 + +0.8 4,202,403 + -0.3 4,202,404 - +0.1 4,202,527 + +0.5 4,202,528 - -0.5 4,202,571 + +0.3 4,202,572 - -0.5 4,202,572 - +0.1 4,202,575 + -0.2 4,202,576 - +0.9 4,202,576 - -0.3 4,202,601 + +0.6 4,202,601 + +1.2 4,202,601 + +0.4 4,202,602 - -0.2 4,202,802 + IAI46_19935 0.22 +1.0 4,202,802 + IAI46_19935 0.22 +0.9 4,202,835 - IAI46_19935 0.24 +0.2 4,202,984 - IAI46_19935 0.35 +0.9 4,202,990 + IAI46_19935 0.36 +0.6 4,202,990 + IAI46_19935 0.36 +1.7 4,202,991 - IAI46_19935 0.36 +0.7 4,202,991 - IAI46_19935 0.36 -0.1 4,202,991 - IAI46_19935 0.36 +0.1 4,202,991 - IAI46_19935 0.36 +0.0 4,202,995 + IAI46_19935 0.36 +0.3 4,202,995 + IAI46_19935 0.36 -1.2 4,202,996 - IAI46_19935 0.36 +0.4 4,202,996 - IAI46_19935 0.36 -0.2 4,202,996 - IAI46_19935 0.36 +0.1 4,202,996 - IAI46_19935 0.36 +0.5 4,203,228 + IAI46_19935 0.53 -0.9 4,203,228 + IAI46_19935 0.53 -0.9
Or see this region's nucleotide sequence