Experiment: Uranyl Acetate Dihydrate 200 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_18760 and IAI46_18765 are separated by 54 nucleotides IAI46_18765 and IAI46_18770 are separated by 437 nucleotides
IAI46_18760: IAI46_18760 - tRNA(Met) cytidine acetyltransferase, at 3,949,913 to 3,951,925
_18760
IAI46_18765: IAI46_18765 - neutral zinc metallopeptidase, at 3,951,980 to 3,952,846
_18765
IAI46_18770: IAI46_18770 - phosphoribosylaminoimidazolesuccinocarboxamide synthase, at 3,953,284 to 3,953,997
_18770
Position (kb)
3951
3952
3953 Strain fitness (log2 ratio)
-2
-1
0
1 at 3950.982 kb on - strand, within IAI46_18760 at 3951.051 kb on + strand, within IAI46_18760 at 3951.090 kb on + strand, within IAI46_18760 at 3951.090 kb on + strand, within IAI46_18760 at 3951.090 kb on + strand, within IAI46_18760 at 3951.155 kb on + strand, within IAI46_18760 at 3951.155 kb on + strand, within IAI46_18760 at 3951.156 kb on - strand, within IAI46_18760 at 3951.378 kb on - strand, within IAI46_18760 at 3951.532 kb on + strand, within IAI46_18760 at 3951.818 kb on - strand at 3951.830 kb on + strand at 3951.831 kb on - strand at 3951.901 kb on + strand at 3951.901 kb on + strand at 3951.902 kb on - strand at 3951.926 kb on - strand at 3951.926 kb on - strand at 3952.063 kb on + strand at 3952.195 kb on - strand, within IAI46_18765 at 3952.354 kb on - strand, within IAI46_18765 at 3952.354 kb on - strand, within IAI46_18765 at 3952.354 kb on - strand, within IAI46_18765 at 3952.421 kb on - strand, within IAI46_18765 at 3952.421 kb on - strand, within IAI46_18765 at 3952.422 kb on + strand, within IAI46_18765 at 3952.423 kb on - strand, within IAI46_18765 at 3952.423 kb on - strand, within IAI46_18765 at 3952.423 kb on - strand, within IAI46_18765 at 3952.423 kb on - strand, within IAI46_18765 at 3952.423 kb on - strand, within IAI46_18765 at 3952.446 kb on + strand, within IAI46_18765 at 3952.503 kb on + strand, within IAI46_18765 at 3952.503 kb on + strand, within IAI46_18765 at 3952.503 kb on + strand, within IAI46_18765 at 3952.503 kb on + strand, within IAI46_18765 at 3952.503 kb on + strand, within IAI46_18765 at 3952.504 kb on - strand, within IAI46_18765 at 3952.504 kb on - strand, within IAI46_18765 at 3952.540 kb on + strand, within IAI46_18765 at 3952.540 kb on + strand, within IAI46_18765 at 3952.565 kb on - strand, within IAI46_18765 at 3952.565 kb on - strand, within IAI46_18765 at 3952.594 kb on + strand, within IAI46_18765 at 3952.698 kb on + strand, within IAI46_18765 at 3952.698 kb on + strand, within IAI46_18765 at 3952.847 kb on - strand at 3952.850 kb on + strand at 3952.850 kb on + strand at 3952.851 kb on - strand at 3952.851 kb on - strand at 3952.863 kb on - strand at 3952.878 kb on + strand at 3952.878 kb on + strand at 3952.879 kb on - strand at 3952.879 kb on - strand at 3952.879 kb on - strand at 3952.894 kb on + strand at 3952.941 kb on + strand at 3952.941 kb on + strand at 3952.941 kb on + strand at 3952.941 kb on + strand at 3952.950 kb on - strand at 3952.950 kb on - strand at 3952.950 kb on - strand at 3952.997 kb on + strand at 3953.009 kb on + strand at 3953.010 kb on - strand at 3953.010 kb on - strand at 3953.015 kb on + strand at 3953.016 kb on - strand at 3953.017 kb on + strand at 3953.042 kb on + strand at 3953.076 kb on - strand at 3953.076 kb on - strand at 3953.076 kb on - strand at 3953.200 kb on + strand at 3953.325 kb on - strand at 3953.531 kb on + strand, within IAI46_18770 at 3953.532 kb on - strand, within IAI46_18770 at 3953.532 kb on - strand, within IAI46_18770 at 3953.592 kb on - strand, within IAI46_18770 at 3953.662 kb on + strand, within IAI46_18770 at 3953.663 kb on - strand, within IAI46_18770 at 3953.827 kb on - strand, within IAI46_18770 at 3953.827 kb on - strand, within IAI46_18770
Per-strain Table
Position Strand Gene LocusTag Fraction Uranyl Acetate Dihydrate 200 uM, aerobic remove 3,950,982 - IAI46_18760 0.53 -0.1 3,951,051 + IAI46_18760 0.57 +0.7 3,951,090 + IAI46_18760 0.58 +0.6 3,951,090 + IAI46_18760 0.58 +1.0 3,951,090 + IAI46_18760 0.58 +0.2 3,951,155 + IAI46_18760 0.62 -0.0 3,951,155 + IAI46_18760 0.62 +1.1 3,951,156 - IAI46_18760 0.62 +0.5 3,951,378 - IAI46_18760 0.73 +0.7 3,951,532 + IAI46_18760 0.80 -0.6 3,951,818 - +0.5 3,951,830 + -0.3 3,951,831 - +0.6 3,951,901 + -0.2 3,951,901 + +0.1 3,951,902 - +1.1 3,951,926 - +0.1 3,951,926 - -1.6 3,952,063 + +0.3 3,952,195 - IAI46_18765 0.25 -0.3 3,952,354 - IAI46_18765 0.43 +0.3 3,952,354 - IAI46_18765 0.43 +1.1 3,952,354 - IAI46_18765 0.43 -0.1 3,952,421 - IAI46_18765 0.51 -0.2 3,952,421 - IAI46_18765 0.51 +0.5 3,952,422 + IAI46_18765 0.51 -0.4 3,952,423 - IAI46_18765 0.51 +1.3 3,952,423 - IAI46_18765 0.51 -0.2 3,952,423 - IAI46_18765 0.51 -0.2 3,952,423 - IAI46_18765 0.51 +0.2 3,952,423 - IAI46_18765 0.51 +0.0 3,952,446 + IAI46_18765 0.54 +0.1 3,952,503 + IAI46_18765 0.60 +0.9 3,952,503 + IAI46_18765 0.60 -1.2 3,952,503 + IAI46_18765 0.60 -0.4 3,952,503 + IAI46_18765 0.60 -0.9 3,952,503 + IAI46_18765 0.60 +1.3 3,952,504 - IAI46_18765 0.60 +0.3 3,952,504 - IAI46_18765 0.60 +0.3 3,952,540 + IAI46_18765 0.65 +1.3 3,952,540 + IAI46_18765 0.65 +0.3 3,952,565 - IAI46_18765 0.67 -0.6 3,952,565 - IAI46_18765 0.67 +0.7 3,952,594 + IAI46_18765 0.71 +0.5 3,952,698 + IAI46_18765 0.83 +0.2 3,952,698 + IAI46_18765 0.83 -0.5 3,952,847 - +1.2 3,952,850 + -0.2 3,952,850 + -0.1 3,952,851 - -0.4 3,952,851 - +0.4 3,952,863 - -1.0 3,952,878 + -0.8 3,952,878 + +0.7 3,952,879 - -0.5 3,952,879 - +0.5 3,952,879 - +0.5 3,952,894 + +1.3 3,952,941 + -0.2 3,952,941 + +0.1 3,952,941 + +0.6 3,952,941 + +0.5 3,952,950 - -1.0 3,952,950 - -0.5 3,952,950 - -0.4 3,952,997 + -0.2 3,953,009 + +0.6 3,953,010 - +0.0 3,953,010 - +0.2 3,953,015 + +0.0 3,953,016 - +0.0 3,953,017 + -0.5 3,953,042 + -0.4 3,953,076 - -0.2 3,953,076 - -0.1 3,953,076 - -0.6 3,953,200 + +0.9 3,953,325 - -0.8 3,953,531 + IAI46_18770 0.35 -1.3 3,953,532 - IAI46_18770 0.35 -2.7 3,953,532 - IAI46_18770 0.35 -2.1 3,953,592 - IAI46_18770 0.43 +1.3 3,953,662 + IAI46_18770 0.53 -0.2 3,953,663 - IAI46_18770 0.53 -0.5 3,953,827 - IAI46_18770 0.76 -1.3 3,953,827 - IAI46_18770 0.76 -1.7
Or see this region's nucleotide sequence