Experiment: Uranyl Acetate Dihydrate 200 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_18575 and IAI46_18580 overlap by 11 nucleotides IAI46_18580 and IAI46_18585 are separated by 48 nucleotides
IAI46_18575: IAI46_18575 - S-methylmethionine permease, at 3,911,165 to 3,912,574
_18575
IAI46_18580: IAI46_18580 - homocysteine S-methyltransferase, at 3,912,564 to 3,913,502
_18580
IAI46_18585: IAI46_18585 - NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase, at 3,913,551 to 3,915,830
_18585
Position (kb)
3912
3913
3914 Strain fitness (log2 ratio)
-2
-1
0
1 at 3911.595 kb on + strand, within IAI46_18575 at 3911.596 kb on - strand, within IAI46_18575 at 3911.596 kb on - strand, within IAI46_18575 at 3911.596 kb on - strand, within IAI46_18575 at 3911.596 kb on - strand, within IAI46_18575 at 3911.656 kb on + strand, within IAI46_18575 at 3911.938 kb on + strand, within IAI46_18575 at 3912.023 kb on + strand, within IAI46_18575 at 3912.023 kb on + strand, within IAI46_18575 at 3912.023 kb on + strand, within IAI46_18575 at 3912.089 kb on + strand, within IAI46_18575 at 3912.089 kb on + strand, within IAI46_18575 at 3912.090 kb on - strand, within IAI46_18575 at 3912.161 kb on - strand, within IAI46_18575 at 3912.211 kb on - strand, within IAI46_18575 at 3912.223 kb on - strand, within IAI46_18575 at 3912.375 kb on - strand, within IAI46_18575 at 3912.516 kb on - strand at 3912.518 kb on + strand at 3912.519 kb on - strand at 3912.736 kb on - strand, within IAI46_18580 at 3912.774 kb on + strand, within IAI46_18580 at 3912.774 kb on + strand, within IAI46_18580 at 3912.879 kb on + strand, within IAI46_18580 at 3912.946 kb on - strand, within IAI46_18580 at 3913.267 kb on + strand, within IAI46_18580 at 3913.268 kb on - strand, within IAI46_18580 at 3913.341 kb on + strand, within IAI46_18580 at 3913.405 kb on + strand, within IAI46_18580 at 3913.458 kb on - strand at 3913.469 kb on + strand at 3913.470 kb on - strand at 3913.552 kb on + strand at 3913.554 kb on + strand at 3913.554 kb on + strand at 3913.554 kb on + strand at 3913.650 kb on + strand at 3913.676 kb on + strand at 3913.711 kb on + strand at 3913.712 kb on - strand at 3913.712 kb on - strand at 3913.712 kb on - strand at 3913.743 kb on - strand at 3913.743 kb on - strand at 3913.743 kb on - strand at 3913.883 kb on + strand, within IAI46_18585 at 3914.035 kb on + strand, within IAI46_18585 at 3914.035 kb on + strand, within IAI46_18585 at 3914.035 kb on + strand, within IAI46_18585 at 3914.036 kb on - strand, within IAI46_18585 at 3914.036 kb on - strand, within IAI46_18585 at 3914.036 kb on - strand, within IAI46_18585 at 3914.036 kb on - strand, within IAI46_18585 at 3914.121 kb on + strand, within IAI46_18585 at 3914.152 kb on + strand, within IAI46_18585 at 3914.152 kb on + strand, within IAI46_18585 at 3914.153 kb on - strand, within IAI46_18585 at 3914.287 kb on + strand, within IAI46_18585 at 3914.291 kb on - strand, within IAI46_18585 at 3914.302 kb on + strand, within IAI46_18585
Per-strain Table
Position Strand Gene LocusTag Fraction Uranyl Acetate Dihydrate 200 uM, aerobic remove 3,911,595 + IAI46_18575 0.30 +0.2 3,911,596 - IAI46_18575 0.31 -0.7 3,911,596 - IAI46_18575 0.31 +0.9 3,911,596 - IAI46_18575 0.31 +0.5 3,911,596 - IAI46_18575 0.31 -0.7 3,911,656 + IAI46_18575 0.35 +0.9 3,911,938 + IAI46_18575 0.55 +0.1 3,912,023 + IAI46_18575 0.61 -0.1 3,912,023 + IAI46_18575 0.61 -0.8 3,912,023 + IAI46_18575 0.61 -1.1 3,912,089 + IAI46_18575 0.66 +0.4 3,912,089 + IAI46_18575 0.66 -0.7 3,912,090 - IAI46_18575 0.66 +0.2 3,912,161 - IAI46_18575 0.71 -0.7 3,912,211 - IAI46_18575 0.74 -0.2 3,912,223 - IAI46_18575 0.75 -0.3 3,912,375 - IAI46_18575 0.86 +0.1 3,912,516 - +0.7 3,912,518 + -0.7 3,912,519 - +0.0 3,912,736 - IAI46_18580 0.18 -0.0 3,912,774 + IAI46_18580 0.22 -0.3 3,912,774 + IAI46_18580 0.22 -1.9 3,912,879 + IAI46_18580 0.34 +0.3 3,912,946 - IAI46_18580 0.41 +0.0 3,913,267 + IAI46_18580 0.75 +1.2 3,913,268 - IAI46_18580 0.75 +0.3 3,913,341 + IAI46_18580 0.83 +0.6 3,913,405 + IAI46_18580 0.90 +0.0 3,913,458 - +0.4 3,913,469 + +0.6 3,913,470 - +0.6 3,913,552 + +0.9 3,913,554 + -1.5 3,913,554 + -1.1 3,913,554 + +0.0 3,913,650 + +0.9 3,913,676 + +0.0 3,913,711 + -0.8 3,913,712 - +0.3 3,913,712 - +0.3 3,913,712 - +0.6 3,913,743 - +0.8 3,913,743 - +0.5 3,913,743 - +0.6 3,913,883 + IAI46_18585 0.15 +0.4 3,914,035 + IAI46_18585 0.21 -1.6 3,914,035 + IAI46_18585 0.21 -1.2 3,914,035 + IAI46_18585 0.21 +0.5 3,914,036 - IAI46_18585 0.21 +0.8 3,914,036 - IAI46_18585 0.21 +1.2 3,914,036 - IAI46_18585 0.21 -0.1 3,914,036 - IAI46_18585 0.21 +0.3 3,914,121 + IAI46_18585 0.25 +0.3 3,914,152 + IAI46_18585 0.26 +0.2 3,914,152 + IAI46_18585 0.26 -1.3 3,914,153 - IAI46_18585 0.26 -0.6 3,914,287 + IAI46_18585 0.32 -1.7 3,914,291 - IAI46_18585 0.32 +0.4 3,914,302 + IAI46_18585 0.33 +0.3
Or see this region's nucleotide sequence