Experiment: Uranyl Acetate Dihydrate 200 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_18030 and IAI46_18035 are separated by 170 nucleotides IAI46_18035 and IAI46_18040 are separated by 66 nucleotides IAI46_18040 and IAI46_18045 are separated by 405 nucleotides
IAI46_18030: IAI46_18030 - 50S ribosomal protein L3 N(5)-glutamine methyltransferase, at 3,800,374 to 3,801,306
_18030
IAI46_18035: IAI46_18035 - endonuclease SmrB, at 3,801,477 to 3,802,007
_18035
IAI46_18040: IAI46_18040 - phosphohistidine phosphatase SixA, at 3,802,074 to 3,802,556
_18040
IAI46_18045: IAI46_18045 - fatty acid oxidation complex subunit alpha FadJ, at 3,802,962 to 3,805,127
_18045
Position (kb)
3802
3803 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3801.132 kb on + strand, within IAI46_18030 at 3801.206 kb on + strand, within IAI46_18030 at 3801.206 kb on + strand, within IAI46_18030 at 3801.207 kb on - strand, within IAI46_18030 at 3801.207 kb on - strand, within IAI46_18030 at 3801.207 kb on - strand, within IAI46_18030 at 3801.209 kb on + strand, within IAI46_18030 at 3801.209 kb on + strand, within IAI46_18030 at 3801.209 kb on + strand, within IAI46_18030 at 3801.210 kb on - strand, within IAI46_18030 at 3801.210 kb on - strand, within IAI46_18030 at 3801.210 kb on - strand, within IAI46_18030 at 3801.210 kb on - strand, within IAI46_18030 at 3801.210 kb on - strand, within IAI46_18030 at 3801.210 kb on - strand, within IAI46_18030 at 3801.210 kb on - strand, within IAI46_18030 at 3801.210 kb on - strand, within IAI46_18030 at 3801.252 kb on + strand at 3801.252 kb on + strand at 3801.252 kb on + strand at 3801.253 kb on - strand at 3801.253 kb on - strand at 3801.253 kb on - strand at 3801.348 kb on + strand at 3801.349 kb on - strand at 3801.349 kb on - strand at 3801.441 kb on - strand at 3801.533 kb on - strand, within IAI46_18035 at 3801.533 kb on - strand, within IAI46_18035 at 3801.536 kb on - strand, within IAI46_18035 at 3801.711 kb on + strand, within IAI46_18035 at 3801.982 kb on + strand at 3801.983 kb on - strand at 3802.077 kb on + strand at 3802.082 kb on + strand at 3802.127 kb on - strand, within IAI46_18040 at 3802.231 kb on - strand, within IAI46_18040 at 3802.285 kb on + strand, within IAI46_18040 at 3802.286 kb on - strand, within IAI46_18040 at 3802.286 kb on - strand, within IAI46_18040 at 3802.444 kb on - strand, within IAI46_18040 at 3802.541 kb on + strand at 3802.556 kb on + strand at 3802.557 kb on - strand at 3802.582 kb on - strand at 3802.588 kb on - strand at 3802.589 kb on + strand at 3802.762 kb on - strand at 3802.844 kb on + strand at 3802.844 kb on + strand at 3802.849 kb on + strand at 3802.849 kb on + strand at 3802.860 kb on + strand at 3802.870 kb on + strand at 3802.872 kb on + strand at 3802.873 kb on - strand at 3802.907 kb on - strand at 3802.931 kb on + strand at 3802.931 kb on + strand at 3802.936 kb on + strand at 3802.937 kb on - strand at 3802.937 kb on - strand at 3802.940 kb on - strand at 3803.057 kb on - strand at 3803.069 kb on + strand at 3803.070 kb on - strand at 3803.070 kb on - strand at 3803.070 kb on - strand at 3803.099 kb on + strand at 3803.099 kb on + strand at 3803.099 kb on + strand at 3803.100 kb on - strand at 3803.101 kb on + strand at 3803.101 kb on + strand at 3803.227 kb on - strand, within IAI46_18045 at 3803.256 kb on + strand, within IAI46_18045 at 3803.291 kb on - strand, within IAI46_18045 at 3803.456 kb on + strand, within IAI46_18045 at 3803.500 kb on - strand, within IAI46_18045
Per-strain Table
Position Strand Gene LocusTag Fraction Uranyl Acetate Dihydrate 200 uM, aerobic remove 3,801,132 + IAI46_18030 0.81 -0.5 3,801,206 + IAI46_18030 0.89 +0.4 3,801,206 + IAI46_18030 0.89 -0.9 3,801,207 - IAI46_18030 0.89 +0.9 3,801,207 - IAI46_18030 0.89 -0.4 3,801,207 - IAI46_18030 0.89 +0.4 3,801,209 + IAI46_18030 0.89 -0.3 3,801,209 + IAI46_18030 0.89 +0.6 3,801,209 + IAI46_18030 0.89 +0.0 3,801,210 - IAI46_18030 0.90 +0.0 3,801,210 - IAI46_18030 0.90 +0.3 3,801,210 - IAI46_18030 0.90 +1.0 3,801,210 - IAI46_18030 0.90 +0.3 3,801,210 - IAI46_18030 0.90 +0.7 3,801,210 - IAI46_18030 0.90 -0.5 3,801,210 - IAI46_18030 0.90 +0.2 3,801,210 - IAI46_18030 0.90 -0.4 3,801,252 + +0.2 3,801,252 + +1.0 3,801,252 + -1.8 3,801,253 - +0.1 3,801,253 - +0.2 3,801,253 - -1.8 3,801,348 + +0.2 3,801,349 - -0.1 3,801,349 - +0.2 3,801,441 - +0.8 3,801,533 - IAI46_18035 0.11 +2.6 3,801,533 - IAI46_18035 0.11 -0.6 3,801,536 - IAI46_18035 0.11 +0.2 3,801,711 + IAI46_18035 0.44 +0.0 3,801,982 + -0.0 3,801,983 - -0.5 3,802,077 + +0.3 3,802,082 + -1.0 3,802,127 - IAI46_18040 0.11 +0.0 3,802,231 - IAI46_18040 0.33 +0.5 3,802,285 + IAI46_18040 0.44 +1.0 3,802,286 - IAI46_18040 0.44 -1.0 3,802,286 - IAI46_18040 0.44 -1.1 3,802,444 - IAI46_18040 0.77 +0.6 3,802,541 + -1.2 3,802,556 + +1.0 3,802,557 - +0.6 3,802,582 - -0.1 3,802,588 - -0.7 3,802,589 + -1.1 3,802,762 - +0.5 3,802,844 + +0.1 3,802,844 + -0.1 3,802,849 + +0.3 3,802,849 + -2.0 3,802,860 + -0.6 3,802,870 + +0.8 3,802,872 + +0.5 3,802,873 - +1.0 3,802,907 - +0.6 3,802,931 + +0.1 3,802,931 + +0.2 3,802,936 + +0.4 3,802,937 - -0.1 3,802,937 - -0.8 3,802,940 - +0.6 3,803,057 - +0.1 3,803,069 + +0.3 3,803,070 - +0.6 3,803,070 - +0.0 3,803,070 - +0.4 3,803,099 + -0.2 3,803,099 + -1.3 3,803,099 + +1.6 3,803,100 - +0.3 3,803,101 + -0.3 3,803,101 + +0.7 3,803,227 - IAI46_18045 0.12 +0.6 3,803,256 + IAI46_18045 0.14 -0.5 3,803,291 - IAI46_18045 0.15 +0.2 3,803,456 + IAI46_18045 0.23 +1.0 3,803,500 - IAI46_18045 0.25 -0.5
Or see this region's nucleotide sequence