Experiment: Uranyl Acetate Dihydrate 200 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_17175 and IAI46_17180 overlap by 4 nucleotides IAI46_17180 and IAI46_17185 are separated by 246 nucleotides
IAI46_17175: IAI46_17175 - sugar ABC transporter ATP-binding protein, at 3,602,227 to 3,603,738
_17175
IAI46_17180: IAI46_17180 - ABC transporter permease, at 3,603,735 to 3,604,730
_17180
IAI46_17185: IAI46_17185 - ligand-gated channel protein, at 3,604,977 to 3,606,971
_17185
Position (kb)
3603
3604
3605 Strain fitness (log2 ratio)
-2
-1
0
1 at 3602.829 kb on + strand, within IAI46_17175 at 3602.829 kb on + strand, within IAI46_17175 at 3602.829 kb on + strand, within IAI46_17175 at 3602.829 kb on + strand, within IAI46_17175 at 3602.842 kb on - strand, within IAI46_17175 at 3603.018 kb on - strand, within IAI46_17175 at 3603.046 kb on - strand, within IAI46_17175 at 3603.216 kb on + strand, within IAI46_17175 at 3603.216 kb on + strand, within IAI46_17175 at 3603.455 kb on + strand, within IAI46_17175 at 3603.486 kb on + strand, within IAI46_17175 at 3603.486 kb on + strand, within IAI46_17175 at 3603.486 kb on + strand, within IAI46_17175 at 3603.588 kb on + strand at 3603.589 kb on - strand at 3603.589 kb on - strand at 3603.704 kb on + strand at 3603.704 kb on + strand at 3603.707 kb on + strand at 3603.708 kb on - strand at 3603.708 kb on - strand at 3603.798 kb on + strand at 3603.814 kb on + strand at 3604.073 kb on + strand, within IAI46_17180 at 3604.074 kb on - strand, within IAI46_17180 at 3604.074 kb on - strand, within IAI46_17180 at 3604.180 kb on - strand, within IAI46_17180 at 3604.180 kb on - strand, within IAI46_17180 at 3604.185 kb on + strand, within IAI46_17180 at 3604.313 kb on - strand, within IAI46_17180 at 3604.359 kb on + strand, within IAI46_17180 at 3604.359 kb on + strand, within IAI46_17180 at 3604.359 kb on + strand, within IAI46_17180 at 3604.360 kb on - strand, within IAI46_17180 at 3604.360 kb on - strand, within IAI46_17180 at 3604.412 kb on - strand, within IAI46_17180 at 3604.432 kb on - strand, within IAI46_17180 at 3604.436 kb on + strand, within IAI46_17180 at 3604.436 kb on + strand, within IAI46_17180 at 3604.437 kb on - strand, within IAI46_17180 at 3604.437 kb on - strand, within IAI46_17180 at 3604.437 kb on - strand, within IAI46_17180 at 3604.657 kb on - strand at 3604.659 kb on + strand at 3604.659 kb on + strand at 3604.660 kb on - strand at 3604.775 kb on + strand at 3604.862 kb on - strand at 3604.993 kb on - strand at 3604.995 kb on - strand at 3604.995 kb on - strand at 3605.021 kb on + strand at 3605.021 kb on + strand at 3605.021 kb on + strand at 3605.022 kb on - strand at 3605.238 kb on - strand, within IAI46_17185 at 3605.265 kb on + strand, within IAI46_17185 at 3605.438 kb on - strand, within IAI46_17185 at 3605.468 kb on + strand, within IAI46_17185 at 3605.535 kb on - strand, within IAI46_17185
Per-strain Table
Position Strand Gene LocusTag Fraction Uranyl Acetate Dihydrate 200 uM, aerobic remove 3,602,829 + IAI46_17175 0.40 +1.2 3,602,829 + IAI46_17175 0.40 -0.4 3,602,829 + IAI46_17175 0.40 -0.5 3,602,829 + IAI46_17175 0.40 +0.3 3,602,842 - IAI46_17175 0.41 -0.9 3,603,018 - IAI46_17175 0.52 +0.2 3,603,046 - IAI46_17175 0.54 -0.2 3,603,216 + IAI46_17175 0.65 +0.1 3,603,216 + IAI46_17175 0.65 +1.3 3,603,455 + IAI46_17175 0.81 +1.3 3,603,486 + IAI46_17175 0.83 +0.0 3,603,486 + IAI46_17175 0.83 +1.1 3,603,486 + IAI46_17175 0.83 -1.8 3,603,588 + +0.1 3,603,589 - -0.6 3,603,589 - +0.8 3,603,704 + +0.8 3,603,704 + +0.5 3,603,707 + -0.0 3,603,708 - -0.3 3,603,708 - -0.2 3,603,798 + +0.9 3,603,814 + -0.5 3,604,073 + IAI46_17180 0.34 +0.3 3,604,074 - IAI46_17180 0.34 -0.8 3,604,074 - IAI46_17180 0.34 +0.6 3,604,180 - IAI46_17180 0.45 -0.0 3,604,180 - IAI46_17180 0.45 -0.7 3,604,185 + IAI46_17180 0.45 -0.5 3,604,313 - IAI46_17180 0.58 +0.1 3,604,359 + IAI46_17180 0.63 -0.6 3,604,359 + IAI46_17180 0.63 -0.3 3,604,359 + IAI46_17180 0.63 +0.8 3,604,360 - IAI46_17180 0.63 -0.4 3,604,360 - IAI46_17180 0.63 +0.9 3,604,412 - IAI46_17180 0.68 -0.4 3,604,432 - IAI46_17180 0.70 +0.1 3,604,436 + IAI46_17180 0.70 +0.2 3,604,436 + IAI46_17180 0.70 -0.6 3,604,437 - IAI46_17180 0.70 +1.3 3,604,437 - IAI46_17180 0.70 +0.4 3,604,437 - IAI46_17180 0.70 +1.2 3,604,657 - -1.6 3,604,659 + +0.5 3,604,659 + -0.3 3,604,660 - -1.2 3,604,775 + +0.9 3,604,862 - +0.3 3,604,993 - +0.6 3,604,995 - +0.6 3,604,995 - +0.5 3,605,021 + -0.2 3,605,021 + +1.6 3,605,021 + -0.5 3,605,022 - -0.1 3,605,238 - IAI46_17185 0.13 -0.3 3,605,265 + IAI46_17185 0.14 +1.0 3,605,438 - IAI46_17185 0.23 +0.5 3,605,468 + IAI46_17185 0.25 -1.2 3,605,535 - IAI46_17185 0.28 -0.4
Or see this region's nucleotide sequence