Experiment: Uranyl Acetate Dihydrate 200 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_14275 and IAI46_14285 are separated by 322 nucleotides IAI46_14285 and IAI46_14290 are separated by 102 nucleotides IAI46_14290 and IAI46_14295 are separated by 45 nucleotides IAI46_14295 and IAI46_14300 are separated by 18 nucleotides IAI46_14300 and IAI46_14305 overlap by 4 nucleotides
IAI46_14275: IAI46_14275 - tRNA-Tyr, at 3,031,290 to 3,031,374
_14275
IAI46_14285: IAI46_14285 - TIGR00730 family Rossman fold protein, at 3,031,697 to 3,032,269
_14285
IAI46_14290: IAI46_14290 - exodeoxyribonuclease III, at 3,032,372 to 3,033,178
_14290
IAI46_14295: IAI46_14295 - pyrimidine (deoxy)nucleoside triphosphate diphosphatase, at 3,033,224 to 3,033,625
_14295
IAI46_14300: IAI46_14300 - YnjH family protein, at 3,033,644 to 3,033,937
_14300
IAI46_14305: IAI46_14305 - DNA topoisomerase III, at 3,033,934 to 3,035,859
_14305
Position (kb)
3032
3033
3034 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3031.381 kb on + strand at 3031.381 kb on + strand at 3031.381 kb on + strand at 3031.381 kb on + strand at 3031.526 kb on + strand at 3031.553 kb on - strand at 3031.553 kb on - strand at 3031.553 kb on - strand at 3031.600 kb on - strand at 3031.657 kb on + strand at 3032.023 kb on - strand, within IAI46_14285 at 3032.114 kb on + strand, within IAI46_14285 at 3032.162 kb on - strand, within IAI46_14285 at 3032.174 kb on + strand, within IAI46_14285 at 3032.389 kb on + strand at 3032.491 kb on + strand, within IAI46_14290 at 3032.492 kb on - strand, within IAI46_14290 at 3032.519 kb on + strand, within IAI46_14290 at 3032.519 kb on + strand, within IAI46_14290 at 3032.538 kb on - strand, within IAI46_14290 at 3032.696 kb on + strand, within IAI46_14290 at 3032.830 kb on + strand, within IAI46_14290 at 3032.847 kb on - strand, within IAI46_14290 at 3032.966 kb on + strand, within IAI46_14290 at 3033.113 kb on + strand at 3033.434 kb on - strand, within IAI46_14295 at 3033.434 kb on - strand, within IAI46_14295 at 3033.460 kb on + strand, within IAI46_14295 at 3033.465 kb on + strand, within IAI46_14295 at 3033.465 kb on + strand, within IAI46_14295 at 3033.596 kb on + strand at 3033.596 kb on + strand at 3033.597 kb on - strand at 3033.598 kb on + strand at 3033.609 kb on + strand at 3033.766 kb on - strand, within IAI46_14300
Per-strain Table
Position Strand Gene LocusTag Fraction Uranyl Acetate Dihydrate 200 uM, aerobic remove 3,031,381 + +0.1 3,031,381 + -1.4 3,031,381 + -0.0 3,031,381 + -0.6 3,031,526 + +0.4 3,031,553 - -2.3 3,031,553 - -0.5 3,031,553 - +1.3 3,031,600 - +0.5 3,031,657 + +0.8 3,032,023 - IAI46_14285 0.57 -0.0 3,032,114 + IAI46_14285 0.73 +1.9 3,032,162 - IAI46_14285 0.81 -0.5 3,032,174 + IAI46_14285 0.83 -0.9 3,032,389 + +1.0 3,032,491 + IAI46_14290 0.15 +0.8 3,032,492 - IAI46_14290 0.15 +0.2 3,032,519 + IAI46_14290 0.18 +0.6 3,032,519 + IAI46_14290 0.18 +0.2 3,032,538 - IAI46_14290 0.21 -0.3 3,032,696 + IAI46_14290 0.40 +0.6 3,032,830 + IAI46_14290 0.57 +0.2 3,032,847 - IAI46_14290 0.59 -0.3 3,032,966 + IAI46_14290 0.74 +0.7 3,033,113 + -1.0 3,033,434 - IAI46_14295 0.52 -0.9 3,033,434 - IAI46_14295 0.52 -1.0 3,033,460 + IAI46_14295 0.59 -0.2 3,033,465 + IAI46_14295 0.60 -0.8 3,033,465 + IAI46_14295 0.60 -0.6 3,033,596 + +0.2 3,033,596 + +0.2 3,033,597 - -0.5 3,033,598 + -0.4 3,033,609 + -1.3 3,033,766 - IAI46_14300 0.41 +1.0
Or see this region's nucleotide sequence