Experiment: Uranyl Acetate Dihydrate 200 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_13480 and IAI46_13485 are separated by 122 nucleotides IAI46_13485 and IAI46_13490 are separated by 96 nucleotides IAI46_13490 and IAI46_13495 overlap by 1 nucleotides IAI46_13495 and IAI46_13500 are separated by 161 nucleotides
IAI46_13480: IAI46_13480 - YcjX family protein, at 2,880,170 to 2,881,567
_13480
IAI46_13485: IAI46_13485 - phage shock protein PspD, at 2,881,690 to 2,881,938
_13485
IAI46_13490: IAI46_13490 - envelope stress response membrane protein PspC, at 2,882,035 to 2,882,394
_13490
IAI46_13495: IAI46_13495 - envelope stress response membrane protein PspB, at 2,882,394 to 2,882,621
_13495
IAI46_13500: IAI46_13500 - phage shock protein PspA, at 2,882,783 to 2,883,448
_13500
Position (kb)
2881
2882 Strain fitness (log2 ratio)
-1
0
1 at 2880.982 kb on - strand, within IAI46_13480 at 2880.982 kb on - strand, within IAI46_13480 at 2880.982 kb on - strand, within IAI46_13480 at 2881.042 kb on + strand, within IAI46_13480 at 2881.043 kb on - strand, within IAI46_13480 at 2881.088 kb on + strand, within IAI46_13480 at 2881.123 kb on - strand, within IAI46_13480 at 2881.123 kb on - strand, within IAI46_13480 at 2881.167 kb on + strand, within IAI46_13480 at 2881.327 kb on - strand, within IAI46_13480 at 2881.624 kb on + strand at 2881.648 kb on - strand at 2881.648 kb on - strand at 2881.766 kb on - strand, within IAI46_13485 at 2881.843 kb on + strand, within IAI46_13485 at 2881.843 kb on + strand, within IAI46_13485 at 2881.844 kb on - strand, within IAI46_13485 at 2881.893 kb on + strand, within IAI46_13485 at 2881.894 kb on - strand, within IAI46_13485 at 2882.020 kb on - strand at 2882.036 kb on + strand at 2882.129 kb on + strand, within IAI46_13490 at 2882.463 kb on - strand, within IAI46_13495 at 2882.610 kb on + strand at 2882.635 kb on + strand at 2882.918 kb on - strand, within IAI46_13500
Per-strain Table
Position Strand Gene LocusTag Fraction Uranyl Acetate Dihydrate 200 uM, aerobic remove 2,880,982 - IAI46_13480 0.58 -0.4 2,880,982 - IAI46_13480 0.58 +0.2 2,880,982 - IAI46_13480 0.58 -0.2 2,881,042 + IAI46_13480 0.62 -0.1 2,881,043 - IAI46_13480 0.62 +0.2 2,881,088 + IAI46_13480 0.66 -0.1 2,881,123 - IAI46_13480 0.68 +1.5 2,881,123 - IAI46_13480 0.68 +0.8 2,881,167 + IAI46_13480 0.71 +1.7 2,881,327 - IAI46_13480 0.83 +0.6 2,881,624 + +1.0 2,881,648 - +0.2 2,881,648 - +0.9 2,881,766 - IAI46_13485 0.31 -0.5 2,881,843 + IAI46_13485 0.61 +0.1 2,881,843 + IAI46_13485 0.61 +0.7 2,881,844 - IAI46_13485 0.62 +0.3 2,881,893 + IAI46_13485 0.82 +0.1 2,881,894 - IAI46_13485 0.82 -0.6 2,882,020 - -0.2 2,882,036 + -0.1 2,882,129 + IAI46_13490 0.26 +0.3 2,882,463 - IAI46_13495 0.30 -0.8 2,882,610 + -0.8 2,882,635 + +0.3 2,882,918 - IAI46_13500 0.20 -0.3
Or see this region's nucleotide sequence