Experiment: Uranyl Acetate Dihydrate 200 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_13040 and IAI46_13045 are separated by 213 nucleotides IAI46_13045 and IAI46_13050 are separated by 52 nucleotides IAI46_13050 and IAI46_13055 overlap by 11 nucleotides
IAI46_13040: IAI46_13040 - AraC family transcriptional regulator, at 2,783,348 to 2,784,175
_13040
IAI46_13045: IAI46_13045 - NAD-dependent succinate-semialdehyde dehydrogenase, at 2,784,389 to 2,785,822
_13045
IAI46_13050: IAI46_13050 - alpha/beta hydrolase, at 2,785,875 to 2,786,783
_13050
IAI46_13055: IAI46_13055 - alpha/beta hydrolase, at 2,786,773 to 2,787,669
_13055
Position (kb)
2784
2785
2786 Strain fitness (log2 ratio)
-1
0
1
2 at 2783.611 kb on + strand, within IAI46_13040 at 2784.070 kb on - strand, within IAI46_13040 at 2784.078 kb on - strand, within IAI46_13040 at 2784.215 kb on - strand at 2784.237 kb on + strand at 2784.281 kb on - strand at 2784.411 kb on - strand at 2784.829 kb on + strand, within IAI46_13045 at 2784.996 kb on + strand, within IAI46_13045 at 2785.026 kb on - strand, within IAI46_13045 at 2785.316 kb on - strand, within IAI46_13045 at 2785.427 kb on - strand, within IAI46_13045 at 2785.488 kb on + strand, within IAI46_13045 at 2785.489 kb on - strand, within IAI46_13045 at 2785.605 kb on - strand, within IAI46_13045 at 2785.619 kb on + strand, within IAI46_13045 at 2785.626 kb on - strand, within IAI46_13045 at 2785.785 kb on - strand at 2785.837 kb on + strand at 2785.838 kb on - strand at 2785.841 kb on + strand at 2785.841 kb on + strand at 2785.842 kb on - strand at 2785.842 kb on - strand at 2785.842 kb on - strand at 2785.842 kb on - strand at 2785.851 kb on - strand at 2785.859 kb on + strand at 2786.032 kb on + strand, within IAI46_13050 at 2786.170 kb on + strand, within IAI46_13050 at 2786.170 kb on + strand, within IAI46_13050 at 2786.194 kb on + strand, within IAI46_13050 at 2786.393 kb on - strand, within IAI46_13050 at 2786.500 kb on + strand, within IAI46_13050 at 2786.501 kb on - strand, within IAI46_13050 at 2786.590 kb on + strand, within IAI46_13050
Per-strain Table
Position Strand Gene LocusTag Fraction Uranyl Acetate Dihydrate 200 uM, aerobic remove 2,783,611 + IAI46_13040 0.32 -0.3 2,784,070 - IAI46_13040 0.87 +0.2 2,784,078 - IAI46_13040 0.88 -0.1 2,784,215 - +1.4 2,784,237 + +0.3 2,784,281 - +0.1 2,784,411 - -0.0 2,784,829 + IAI46_13045 0.31 -0.3 2,784,996 + IAI46_13045 0.42 +0.4 2,785,026 - IAI46_13045 0.44 +0.7 2,785,316 - IAI46_13045 0.65 -0.4 2,785,427 - IAI46_13045 0.72 -0.0 2,785,488 + IAI46_13045 0.77 -0.1 2,785,489 - IAI46_13045 0.77 +0.9 2,785,605 - IAI46_13045 0.85 +0.1 2,785,619 + IAI46_13045 0.86 -0.8 2,785,626 - IAI46_13045 0.86 +0.8 2,785,785 - +0.8 2,785,837 + +0.7 2,785,838 - +0.3 2,785,841 + +0.3 2,785,841 + +0.7 2,785,842 - +0.4 2,785,842 - +0.4 2,785,842 - +0.3 2,785,842 - -1.4 2,785,851 - +1.4 2,785,859 + +0.4 2,786,032 + IAI46_13050 0.17 +0.0 2,786,170 + IAI46_13050 0.32 -0.1 2,786,170 + IAI46_13050 0.32 +0.8 2,786,194 + IAI46_13050 0.35 +2.0 2,786,393 - IAI46_13050 0.57 +0.7 2,786,500 + IAI46_13050 0.69 +0.1 2,786,501 - IAI46_13050 0.69 +0.5 2,786,590 + IAI46_13050 0.79 -0.7
Or see this region's nucleotide sequence