Experiment: Uranyl Acetate Dihydrate 200 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_12420 and IAI46_12425 are separated by 174 nucleotides IAI46_12425 and IAI46_12430 are separated by 8 nucleotides IAI46_12430 and IAI46_12435 overlap by 11 nucleotides
IAI46_12420: IAI46_12420 - aldehyde dehydrogenase family protein, at 2,638,989 to 2,640,506
_12420
IAI46_12425: IAI46_12425 - LysR family transcriptional regulator, at 2,640,681 to 2,641,607
_12425
IAI46_12430: IAI46_12430 - hypothetical protein, at 2,641,616 to 2,641,813
_12430
IAI46_12435: IAI46_12435 - FAD-dependent monooxygenase, at 2,641,803 to 2,643,515
_12435
Position (kb)
2640
2641
2642 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2639.946 kb on - strand, within IAI46_12420 at 2640.110 kb on - strand, within IAI46_12420 at 2640.258 kb on + strand, within IAI46_12420 at 2640.434 kb on - strand at 2640.434 kb on - strand at 2640.501 kb on - strand at 2640.507 kb on - strand at 2640.507 kb on - strand at 2640.556 kb on + strand at 2640.561 kb on + strand at 2640.561 kb on + strand at 2640.561 kb on + strand at 2640.635 kb on + strand at 2640.635 kb on + strand at 2640.635 kb on + strand at 2640.636 kb on - strand at 2640.636 kb on - strand at 2640.636 kb on - strand at 2640.638 kb on - strand at 2640.695 kb on - strand at 2640.782 kb on + strand, within IAI46_12425 at 2640.918 kb on + strand, within IAI46_12425 at 2640.918 kb on + strand, within IAI46_12425 at 2640.919 kb on - strand, within IAI46_12425 at 2641.154 kb on - strand, within IAI46_12425 at 2641.163 kb on - strand, within IAI46_12425 at 2641.163 kb on - strand, within IAI46_12425 at 2641.477 kb on - strand, within IAI46_12425 at 2641.500 kb on + strand, within IAI46_12425 at 2641.617 kb on + strand at 2641.618 kb on - strand at 2641.652 kb on + strand, within IAI46_12430 at 2641.761 kb on + strand, within IAI46_12430 at 2641.773 kb on + strand, within IAI46_12430 at 2641.774 kb on - strand, within IAI46_12430 at 2641.804 kb on + strand at 2641.940 kb on - strand at 2642.211 kb on + strand, within IAI46_12435 at 2642.212 kb on - strand, within IAI46_12435 at 2642.340 kb on - strand, within IAI46_12435 at 2642.452 kb on - strand, within IAI46_12435 at 2642.505 kb on - strand, within IAI46_12435 at 2642.506 kb on + strand, within IAI46_12435 at 2642.507 kb on - strand, within IAI46_12435 at 2642.507 kb on - strand, within IAI46_12435 at 2642.600 kb on - strand, within IAI46_12435
Per-strain Table
Position Strand Gene LocusTag Fraction Uranyl Acetate Dihydrate 200 uM, aerobic remove 2,639,946 - IAI46_12420 0.63 +0.0 2,640,110 - IAI46_12420 0.74 -1.2 2,640,258 + IAI46_12420 0.84 +0.2 2,640,434 - +0.4 2,640,434 - +0.2 2,640,501 - +0.4 2,640,507 - -0.4 2,640,507 - +0.8 2,640,556 + +0.2 2,640,561 + +1.0 2,640,561 + +0.2 2,640,561 + +0.1 2,640,635 + -1.0 2,640,635 + -0.4 2,640,635 + -0.5 2,640,636 - -0.2 2,640,636 - +0.1 2,640,636 - +1.4 2,640,638 - -0.4 2,640,695 - -0.2 2,640,782 + IAI46_12425 0.11 -1.6 2,640,918 + IAI46_12425 0.26 -0.8 2,640,918 + IAI46_12425 0.26 +0.7 2,640,919 - IAI46_12425 0.26 +1.0 2,641,154 - IAI46_12425 0.51 -0.2 2,641,163 - IAI46_12425 0.52 +0.1 2,641,163 - IAI46_12425 0.52 -0.8 2,641,477 - IAI46_12425 0.86 +0.8 2,641,500 + IAI46_12425 0.88 +1.6 2,641,617 + +1.7 2,641,618 - +2.4 2,641,652 + IAI46_12430 0.18 +2.3 2,641,761 + IAI46_12430 0.73 -0.6 2,641,773 + IAI46_12430 0.79 -0.6 2,641,774 - IAI46_12430 0.80 -1.9 2,641,804 + -0.8 2,641,940 - +1.0 2,642,211 + IAI46_12435 0.24 +1.4 2,642,212 - IAI46_12435 0.24 +0.2 2,642,340 - IAI46_12435 0.31 +0.0 2,642,452 - IAI46_12435 0.38 +0.9 2,642,505 - IAI46_12435 0.41 +0.4 2,642,506 + IAI46_12435 0.41 +1.1 2,642,507 - IAI46_12435 0.41 +0.4 2,642,507 - IAI46_12435 0.41 +0.6 2,642,600 - IAI46_12435 0.47 +0.9
Or see this region's nucleotide sequence