Experiment: Uranyl Acetate Dihydrate 200 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_11435 and IAI46_11440 are separated by 112 nucleotides IAI46_11440 and IAI46_11445 are separated by 158 nucleotides IAI46_11445 and IAI46_11450 are separated by 79 nucleotides
IAI46_11435: IAI46_11435 - benzoate/H(+) symporter BenE family transporter, at 2,411,469 to 2,412,662
_11435
IAI46_11440: IAI46_11440 - helix-turn-helix transcriptional regulator, at 2,412,775 to 2,413,338
_11440
IAI46_11445: IAI46_11445 - S9 family peptidase, at 2,413,497 to 2,415,587
_11445
IAI46_11450: IAI46_11450 - dipeptide/tripeptide permease DtpA, at 2,415,667 to 2,417,187
_11450
Position (kb)
2413
2414
2415
2416 Strain fitness (log2 ratio)
-2
-1
0
1 at 2412.567 kb on - strand at 2412.714 kb on + strand at 2412.714 kb on + strand at 2412.727 kb on + strand at 2412.728 kb on - strand at 2413.016 kb on - strand, within IAI46_11440 at 2413.042 kb on + strand, within IAI46_11440 at 2413.276 kb on + strand, within IAI46_11440 at 2413.302 kb on - strand at 2413.409 kb on - strand at 2413.460 kb on + strand at 2413.741 kb on - strand, within IAI46_11445 at 2413.743 kb on + strand, within IAI46_11445 at 2413.746 kb on + strand, within IAI46_11445 at 2413.746 kb on + strand, within IAI46_11445 at 2413.747 kb on - strand, within IAI46_11445 at 2413.847 kb on + strand, within IAI46_11445 at 2413.849 kb on + strand, within IAI46_11445 at 2414.112 kb on + strand, within IAI46_11445 at 2414.173 kb on - strand, within IAI46_11445 at 2414.173 kb on - strand, within IAI46_11445 at 2414.200 kb on + strand, within IAI46_11445 at 2414.200 kb on + strand, within IAI46_11445 at 2414.201 kb on - strand, within IAI46_11445 at 2414.202 kb on + strand, within IAI46_11445 at 2414.202 kb on + strand, within IAI46_11445 at 2414.202 kb on + strand, within IAI46_11445 at 2414.202 kb on + strand, within IAI46_11445 at 2414.202 kb on + strand, within IAI46_11445 at 2414.203 kb on - strand, within IAI46_11445 at 2414.203 kb on - strand, within IAI46_11445 at 2414.203 kb on - strand, within IAI46_11445 at 2414.203 kb on - strand, within IAI46_11445 at 2414.219 kb on + strand, within IAI46_11445 at 2414.241 kb on + strand, within IAI46_11445 at 2414.242 kb on - strand, within IAI46_11445 at 2414.280 kb on + strand, within IAI46_11445 at 2414.443 kb on - strand, within IAI46_11445 at 2414.443 kb on - strand, within IAI46_11445 at 2414.501 kb on - strand, within IAI46_11445 at 2414.557 kb on + strand, within IAI46_11445 at 2414.715 kb on + strand, within IAI46_11445 at 2414.886 kb on - strand, within IAI46_11445 at 2415.157 kb on + strand, within IAI46_11445 at 2415.230 kb on + strand, within IAI46_11445 at 2415.312 kb on + strand, within IAI46_11445 at 2415.313 kb on - strand, within IAI46_11445 at 2415.355 kb on + strand, within IAI46_11445 at 2415.355 kb on + strand, within IAI46_11445 at 2415.466 kb on - strand at 2415.466 kb on - strand at 2415.480 kb on - strand at 2415.480 kb on - strand at 2415.641 kb on + strand at 2415.706 kb on - strand at 2415.735 kb on - strand at 2415.735 kb on - strand at 2415.781 kb on - strand at 2415.812 kb on + strand at 2415.813 kb on - strand at 2416.164 kb on - strand, within IAI46_11450 at 2416.307 kb on + strand, within IAI46_11450 at 2416.308 kb on - strand, within IAI46_11450 at 2416.429 kb on - strand, within IAI46_11450
Per-strain Table
Position Strand Gene LocusTag Fraction Uranyl Acetate Dihydrate 200 uM, aerobic remove 2,412,567 - -0.9 2,412,714 + -0.4 2,412,714 + -0.3 2,412,727 + +1.0 2,412,728 - +0.3 2,413,016 - IAI46_11440 0.43 +0.1 2,413,042 + IAI46_11440 0.47 -0.3 2,413,276 + IAI46_11440 0.89 -0.3 2,413,302 - -0.9 2,413,409 - -0.4 2,413,460 + -0.9 2,413,741 - IAI46_11445 0.12 +0.7 2,413,743 + IAI46_11445 0.12 -0.4 2,413,746 + IAI46_11445 0.12 +0.2 2,413,746 + IAI46_11445 0.12 +0.0 2,413,747 - IAI46_11445 0.12 +0.2 2,413,847 + IAI46_11445 0.17 +0.8 2,413,849 + IAI46_11445 0.17 -0.3 2,414,112 + IAI46_11445 0.29 -1.4 2,414,173 - IAI46_11445 0.32 -1.4 2,414,173 - IAI46_11445 0.32 +1.1 2,414,200 + IAI46_11445 0.34 +0.0 2,414,200 + IAI46_11445 0.34 +0.1 2,414,201 - IAI46_11445 0.34 +0.6 2,414,202 + IAI46_11445 0.34 +0.8 2,414,202 + IAI46_11445 0.34 +0.2 2,414,202 + IAI46_11445 0.34 -1.6 2,414,202 + IAI46_11445 0.34 -0.3 2,414,202 + IAI46_11445 0.34 +0.3 2,414,203 - IAI46_11445 0.34 +1.0 2,414,203 - IAI46_11445 0.34 -0.8 2,414,203 - IAI46_11445 0.34 -1.4 2,414,203 - IAI46_11445 0.34 +0.6 2,414,219 + IAI46_11445 0.35 +0.9 2,414,241 + IAI46_11445 0.36 +1.4 2,414,242 - IAI46_11445 0.36 -2.7 2,414,280 + IAI46_11445 0.37 +1.1 2,414,443 - IAI46_11445 0.45 -0.3 2,414,443 - IAI46_11445 0.45 +0.6 2,414,501 - IAI46_11445 0.48 -1.3 2,414,557 + IAI46_11445 0.51 +0.4 2,414,715 + IAI46_11445 0.58 +0.4 2,414,886 - IAI46_11445 0.66 +0.4 2,415,157 + IAI46_11445 0.79 +0.2 2,415,230 + IAI46_11445 0.83 -0.5 2,415,312 + IAI46_11445 0.87 +0.6 2,415,313 - IAI46_11445 0.87 +0.6 2,415,355 + IAI46_11445 0.89 -1.2 2,415,355 + IAI46_11445 0.89 +0.5 2,415,466 - +0.8 2,415,466 - +0.6 2,415,480 - -0.2 2,415,480 - +0.4 2,415,641 + +0.7 2,415,706 - +0.1 2,415,735 - +1.0 2,415,735 - -1.0 2,415,781 - +1.1 2,415,812 + -0.1 2,415,813 - -0.2 2,416,164 - IAI46_11450 0.33 -0.1 2,416,307 + IAI46_11450 0.42 -1.4 2,416,308 - IAI46_11450 0.42 +0.3 2,416,429 - IAI46_11450 0.50 +0.7
Or see this region's nucleotide sequence