Experiment: Uranyl Acetate Dihydrate 200 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_10120 and IAI46_10125 are separated by 9 nucleotides IAI46_10125 and IAI46_10130 are separated by 191 nucleotides
IAI46_10120: IAI46_10120 - TRAP transporter permease, at 2,134,520 to 2,136,478
_10120
IAI46_10125: IAI46_10125 - TAXI family TRAP transporter solute-binding subunit, at 2,136,488 to 2,137,522
_10125
IAI46_10130: IAI46_10130 - methionine ABC transporter substrate-binding lipoprotein MetQ, at 2,137,714 to 2,138,529
_10130
Position (kb)
2136
2137
2138 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2135.495 kb on - strand, within IAI46_10120 at 2135.509 kb on - strand, within IAI46_10120 at 2135.512 kb on - strand, within IAI46_10120 at 2135.512 kb on - strand, within IAI46_10120 at 2135.553 kb on + strand, within IAI46_10120 at 2135.873 kb on - strand, within IAI46_10120 at 2135.947 kb on - strand, within IAI46_10120 at 2135.997 kb on + strand, within IAI46_10120 at 2136.015 kb on + strand, within IAI46_10120 at 2136.015 kb on + strand, within IAI46_10120 at 2136.016 kb on - strand, within IAI46_10120 at 2136.111 kb on + strand, within IAI46_10120 at 2136.159 kb on + strand, within IAI46_10120 at 2136.159 kb on + strand, within IAI46_10120 at 2136.160 kb on - strand, within IAI46_10120 at 2136.169 kb on - strand, within IAI46_10120 at 2136.264 kb on - strand, within IAI46_10120 at 2136.264 kb on - strand, within IAI46_10120 at 2136.278 kb on + strand, within IAI46_10120 at 2136.301 kb on + strand at 2136.343 kb on - strand at 2136.393 kb on + strand at 2136.394 kb on - strand at 2136.397 kb on + strand at 2136.470 kb on - strand at 2136.478 kb on + strand at 2136.478 kb on + strand at 2136.561 kb on + strand at 2136.564 kb on + strand at 2136.568 kb on + strand at 2136.570 kb on + strand at 2136.570 kb on + strand at 2136.777 kb on + strand, within IAI46_10125 at 2136.777 kb on + strand, within IAI46_10125 at 2136.791 kb on - strand, within IAI46_10125 at 2136.793 kb on + strand, within IAI46_10125 at 2136.984 kb on + strand, within IAI46_10125 at 2137.219 kb on - strand, within IAI46_10125 at 2137.285 kb on + strand, within IAI46_10125 at 2137.386 kb on + strand, within IAI46_10125 at 2137.386 kb on + strand, within IAI46_10125 at 2137.387 kb on - strand, within IAI46_10125 at 2137.387 kb on - strand, within IAI46_10125 at 2137.574 kb on + strand at 2137.601 kb on - strand at 2137.781 kb on + strand at 2137.782 kb on - strand at 2137.850 kb on + strand, within IAI46_10130 at 2137.958 kb on - strand, within IAI46_10130 at 2138.035 kb on - strand, within IAI46_10130 at 2138.180 kb on + strand, within IAI46_10130 at 2138.206 kb on - strand, within IAI46_10130 at 2138.258 kb on + strand, within IAI46_10130 at 2138.258 kb on + strand, within IAI46_10130 at 2138.259 kb on - strand, within IAI46_10130 at 2138.259 kb on - strand, within IAI46_10130 at 2138.361 kb on - strand, within IAI46_10130 at 2138.361 kb on - strand, within IAI46_10130 at 2138.361 kb on - strand, within IAI46_10130 at 2138.397 kb on + strand, within IAI46_10130 at 2138.397 kb on + strand, within IAI46_10130 at 2138.397 kb on + strand, within IAI46_10130 at 2138.443 kb on - strand, within IAI46_10130 at 2138.443 kb on - strand, within IAI46_10130
Per-strain Table
Position Strand Gene LocusTag Fraction Uranyl Acetate Dihydrate 200 uM, aerobic remove 2,135,495 - IAI46_10120 0.50 +1.6 2,135,509 - IAI46_10120 0.50 +0.3 2,135,512 - IAI46_10120 0.51 +0.4 2,135,512 - IAI46_10120 0.51 +0.3 2,135,553 + IAI46_10120 0.53 +1.1 2,135,873 - IAI46_10120 0.69 +1.1 2,135,947 - IAI46_10120 0.73 +0.5 2,135,997 + IAI46_10120 0.75 -0.7 2,136,015 + IAI46_10120 0.76 +0.0 2,136,015 + IAI46_10120 0.76 +1.3 2,136,016 - IAI46_10120 0.76 +0.8 2,136,111 + IAI46_10120 0.81 -0.0 2,136,159 + IAI46_10120 0.84 -0.3 2,136,159 + IAI46_10120 0.84 -0.6 2,136,160 - IAI46_10120 0.84 +0.6 2,136,169 - IAI46_10120 0.84 +0.6 2,136,264 - IAI46_10120 0.89 -1.5 2,136,264 - IAI46_10120 0.89 -0.0 2,136,278 + IAI46_10120 0.90 +0.2 2,136,301 + -0.9 2,136,343 - -0.1 2,136,393 + -0.3 2,136,394 - +0.4 2,136,397 + +1.8 2,136,470 - +0.4 2,136,478 + -0.9 2,136,478 + +0.3 2,136,561 + +0.9 2,136,564 + +0.4 2,136,568 + +0.7 2,136,570 + -0.6 2,136,570 + -0.2 2,136,777 + IAI46_10125 0.28 +0.3 2,136,777 + IAI46_10125 0.28 +0.6 2,136,791 - IAI46_10125 0.29 +0.4 2,136,793 + IAI46_10125 0.29 +0.2 2,136,984 + IAI46_10125 0.48 +0.1 2,137,219 - IAI46_10125 0.71 -0.4 2,137,285 + IAI46_10125 0.77 -0.1 2,137,386 + IAI46_10125 0.87 -0.2 2,137,386 + IAI46_10125 0.87 +0.2 2,137,387 - IAI46_10125 0.87 +0.9 2,137,387 - IAI46_10125 0.87 -0.3 2,137,574 + -0.5 2,137,601 - +0.7 2,137,781 + +1.0 2,137,782 - -0.4 2,137,850 + IAI46_10130 0.17 +0.5 2,137,958 - IAI46_10130 0.30 -0.1 2,138,035 - IAI46_10130 0.39 +0.1 2,138,180 + IAI46_10130 0.57 +0.2 2,138,206 - IAI46_10130 0.60 +0.4 2,138,258 + IAI46_10130 0.67 -0.2 2,138,258 + IAI46_10130 0.67 +0.6 2,138,259 - IAI46_10130 0.67 -1.8 2,138,259 - IAI46_10130 0.67 -0.9 2,138,361 - IAI46_10130 0.79 -0.4 2,138,361 - IAI46_10130 0.79 -0.3 2,138,361 - IAI46_10130 0.79 +0.1 2,138,397 + IAI46_10130 0.84 -0.7 2,138,397 + IAI46_10130 0.84 +0.6 2,138,397 + IAI46_10130 0.84 -1.2 2,138,443 - IAI46_10130 0.89 -0.3 2,138,443 - IAI46_10130 0.89 -0.5
Or see this region's nucleotide sequence