Experiment: Uranyl Acetate Dihydrate 200 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_09340 and IAI46_09345 are separated by 424 nucleotides IAI46_09345 and IAI46_09350 overlap by 4 nucleotides IAI46_09350 and IAI46_09355 are separated by 150 nucleotides IAI46_09355 and IAI46_09360 are separated by 350 nucleotides
IAI46_09340: IAI46_09340 - hypothetical protein, at 1,995,031 to 1,996,074
_09340
IAI46_09345: IAI46_09345 - DNA polymerase III subunit theta, at 1,996,499 to 1,996,765
_09345
IAI46_09350: IAI46_09350 - helix-turn-helix transcriptional regulator, at 1,996,762 to 1,997,358
_09350
IAI46_09355: IAI46_09355 - hypothetical protein, at 1,997,509 to 1,997,727
_09355
IAI46_09360: IAI46_09360 - Pyocin large subunit, at 1,998,078 to 1,998,782
_09360
Position (kb) 1996
1997
1998 Strain fitness (log2 ratio) -1
0
1
2 at 1995.832 kb on - strand, within IAI46_09340 at 1995.946 kb on + strand, within IAI46_09340 at 1995.947 kb on - strand, within IAI46_09340 at 1996.039 kb on - strand at 1996.047 kb on + strand at 1996.055 kb on - strand at 1996.283 kb on + strand at 1996.476 kb on - strand at 1996.500 kb on + strand at 1996.611 kb on - strand, within IAI46_09345 at 1996.611 kb on - strand, within IAI46_09345 at 1996.674 kb on + strand, within IAI46_09345 at 1996.674 kb on + strand, within IAI46_09345 at 1996.675 kb on - strand, within IAI46_09345 at 1996.675 kb on - strand, within IAI46_09345 at 1996.701 kb on - strand, within IAI46_09345 at 1996.701 kb on - strand, within IAI46_09345 at 1996.701 kb on - strand, within IAI46_09345 at 1996.701 kb on - strand, within IAI46_09345 at 1996.701 kb on - strand, within IAI46_09345 at 1997.367 kb on - strand at 1997.470 kb on - strand at 1997.599 kb on + strand, within IAI46_09355 at 1997.600 kb on - strand, within IAI46_09355 at 1997.722 kb on + strand at 1997.840 kb on - strand at 1997.867 kb on + strand at 1997.867 kb on + strand at 1997.900 kb on + strand at 1997.923 kb on + strand at 1997.923 kb on + strand at 1997.924 kb on - strand at 1997.953 kb on + strand at 1997.954 kb on - strand at 1997.974 kb on - strand at 1998.185 kb on - strand, within IAI46_09360 at 1998.185 kb on - strand, within IAI46_09360 at 1998.185 kb on - strand, within IAI46_09360 at 1998.305 kb on - strand, within IAI46_09360 at 1998.305 kb on - strand, within IAI46_09360
Per-strain Table
Position Strand Gene LocusTag Fraction Uranyl Acetate Dihydrate 200 uM, aerobic remove 1,995,832 - IAI46_09340 0.77 +0.9 1,995,946 + IAI46_09340 0.88 +0.3 1,995,947 - IAI46_09340 0.88 +1.2 1,996,039 - +0.5 1,996,047 + +0.1 1,996,055 - +2.0 1,996,283 + +0.9 1,996,476 - +0.1 1,996,500 + +0.0 1,996,611 - IAI46_09345 0.42 +0.5 1,996,611 - IAI46_09345 0.42 +0.4 1,996,674 + IAI46_09345 0.66 +0.0 1,996,674 + IAI46_09345 0.66 +0.0 1,996,675 - IAI46_09345 0.66 +1.2 1,996,675 - IAI46_09345 0.66 +0.5 1,996,701 - IAI46_09345 0.76 +0.0 1,996,701 - IAI46_09345 0.76 -1.3 1,996,701 - IAI46_09345 0.76 -0.6 1,996,701 - IAI46_09345 0.76 +0.5 1,996,701 - IAI46_09345 0.76 +0.0 1,997,367 - +0.3 1,997,470 - -0.3 1,997,599 + IAI46_09355 0.41 +0.0 1,997,600 - IAI46_09355 0.42 +0.9 1,997,722 + -1.3 1,997,840 - -1.6 1,997,867 + +0.4 1,997,867 + -0.6 1,997,900 + -0.1 1,997,923 + +0.1 1,997,923 + +0.2 1,997,924 - -1.2 1,997,953 + -0.0 1,997,954 - -0.2 1,997,974 - +0.9 1,998,185 - IAI46_09360 0.15 +0.1 1,998,185 - IAI46_09360 0.15 +1.2 1,998,185 - IAI46_09360 0.15 -0.9 1,998,305 - IAI46_09360 0.32 +1.4 1,998,305 - IAI46_09360 0.32 +0.0
Or see this region's nucleotide sequence