Experiment: Uranyl Acetate Dihydrate 200 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_07535 and IAI46_07540 are separated by 359 nucleotides IAI46_07540 and IAI46_07545 are separated by 170 nucleotides IAI46_07545 and IAI46_07550 are separated by 393 nucleotides IAI46_07550 and IAI46_07555 are separated by 61 nucleotides
IAI46_07535: IAI46_07535 - glutamine ABC transporter substrate-binding protein GlnH, at 1,593,351 to 1,594,094
_07535
IAI46_07540: IAI46_07540 - DksA/TraR family C4-type zinc finger protein, at 1,594,454 to 1,594,720
_07540
IAI46_07545: IAI46_07545 - DNA starvation/stationary phase protection protein Dps, at 1,594,891 to 1,595,394
_07545
IAI46_07550: IAI46_07550 - adenylate kinase, at 1,595,788 to 1,596,327
_07550
IAI46_07555: IAI46_07555 - YhcH/YjgK/YiaL family protein, at 1,596,389 to 1,596,856
_07555
Position (kb)
1594
1595
1596 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1593.891 kb on - strand, within IAI46_07535 at 1593.904 kb on + strand, within IAI46_07535 at 1593.905 kb on - strand, within IAI46_07535 at 1593.905 kb on - strand, within IAI46_07535 at 1593.905 kb on - strand, within IAI46_07535 at 1593.961 kb on + strand, within IAI46_07535 at 1593.961 kb on + strand, within IAI46_07535 at 1593.962 kb on - strand, within IAI46_07535 at 1593.965 kb on + strand, within IAI46_07535 at 1594.110 kb on + strand at 1594.111 kb on - strand at 1594.111 kb on - strand at 1594.185 kb on + strand at 1594.230 kb on + strand at 1594.298 kb on - strand at 1594.311 kb on + strand at 1594.312 kb on - strand at 1594.312 kb on - strand at 1594.353 kb on + strand at 1594.364 kb on - strand at 1594.364 kb on - strand at 1594.489 kb on + strand, within IAI46_07540 at 1594.491 kb on + strand, within IAI46_07540 at 1594.491 kb on + strand, within IAI46_07540 at 1594.492 kb on - strand, within IAI46_07540 at 1594.608 kb on + strand, within IAI46_07540 at 1594.608 kb on + strand, within IAI46_07540 at 1594.608 kb on + strand, within IAI46_07540 at 1594.609 kb on - strand, within IAI46_07540 at 1594.652 kb on + strand, within IAI46_07540 at 1594.688 kb on + strand, within IAI46_07540 at 1594.733 kb on - strand at 1594.760 kb on - strand at 1594.763 kb on + strand at 1594.767 kb on - strand at 1594.767 kb on - strand at 1594.767 kb on - strand at 1594.767 kb on - strand at 1594.770 kb on + strand at 1594.771 kb on - strand at 1594.775 kb on - strand at 1594.911 kb on + strand at 1594.912 kb on - strand at 1595.075 kb on + strand, within IAI46_07545 at 1595.125 kb on + strand, within IAI46_07545 at 1595.126 kb on - strand, within IAI46_07545 at 1595.340 kb on + strand, within IAI46_07545 at 1595.348 kb on + strand at 1595.349 kb on - strand at 1595.389 kb on - strand at 1595.394 kb on + strand at 1595.394 kb on + strand at 1595.395 kb on - strand at 1595.401 kb on + strand at 1595.412 kb on + strand at 1595.443 kb on - strand at 1595.446 kb on + strand at 1595.448 kb on + strand at 1595.448 kb on + strand at 1595.448 kb on + strand at 1595.449 kb on - strand at 1595.485 kb on - strand at 1595.495 kb on + strand at 1595.563 kb on + strand at 1595.584 kb on + strand at 1595.743 kb on + strand at 1595.744 kb on - strand at 1595.759 kb on + strand at 1595.760 kb on - strand at 1595.846 kb on + strand, within IAI46_07550 at 1595.871 kb on + strand, within IAI46_07550 at 1595.913 kb on + strand, within IAI46_07550 at 1595.992 kb on + strand, within IAI46_07550 at 1596.013 kb on - strand, within IAI46_07550 at 1596.045 kb on - strand, within IAI46_07550 at 1596.045 kb on - strand, within IAI46_07550 at 1596.050 kb on - strand, within IAI46_07550 at 1596.064 kb on - strand, within IAI46_07550 at 1596.064 kb on - strand, within IAI46_07550 at 1596.304 kb on - strand at 1596.391 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Uranyl Acetate Dihydrate 200 uM, aerobic remove 1,593,891 - IAI46_07535 0.73 -0.6 1,593,904 + IAI46_07535 0.74 +0.4 1,593,905 - IAI46_07535 0.74 +0.7 1,593,905 - IAI46_07535 0.74 +1.7 1,593,905 - IAI46_07535 0.74 -2.6 1,593,961 + IAI46_07535 0.82 +1.2 1,593,961 + IAI46_07535 0.82 +0.1 1,593,962 - IAI46_07535 0.82 -0.5 1,593,965 + IAI46_07535 0.83 +1.7 1,594,110 + +0.2 1,594,111 - +0.1 1,594,111 - -0.2 1,594,185 + -0.7 1,594,230 + -0.1 1,594,298 - +0.7 1,594,311 + +0.3 1,594,312 - -0.3 1,594,312 - +0.9 1,594,353 + -0.8 1,594,364 - +0.8 1,594,364 - -0.3 1,594,489 + IAI46_07540 0.13 +0.4 1,594,491 + IAI46_07540 0.14 +1.6 1,594,491 + IAI46_07540 0.14 +0.1 1,594,492 - IAI46_07540 0.14 -0.0 1,594,608 + IAI46_07540 0.58 -0.2 1,594,608 + IAI46_07540 0.58 +0.3 1,594,608 + IAI46_07540 0.58 +0.3 1,594,609 - IAI46_07540 0.58 +0.9 1,594,652 + IAI46_07540 0.74 +1.8 1,594,688 + IAI46_07540 0.88 +0.4 1,594,733 - +1.2 1,594,760 - +0.6 1,594,763 + -0.4 1,594,767 - -0.0 1,594,767 - -0.0 1,594,767 - +0.8 1,594,767 - -0.1 1,594,770 + -1.0 1,594,771 - +0.9 1,594,775 - +0.5 1,594,911 + -0.6 1,594,912 - -0.9 1,595,075 + IAI46_07545 0.37 -0.6 1,595,125 + IAI46_07545 0.46 +1.4 1,595,126 - IAI46_07545 0.47 -0.0 1,595,340 + IAI46_07545 0.89 +0.9 1,595,348 + -0.4 1,595,349 - +0.0 1,595,389 - +1.3 1,595,394 + +0.4 1,595,394 + -0.5 1,595,395 - +0.7 1,595,401 + -0.2 1,595,412 + +1.3 1,595,443 - -0.5 1,595,446 + +1.1 1,595,448 + -0.5 1,595,448 + -0.8 1,595,448 + +0.9 1,595,449 - +0.2 1,595,485 - -0.0 1,595,495 + +1.1 1,595,563 + -0.0 1,595,584 + -0.4 1,595,743 + +0.0 1,595,744 - -0.9 1,595,759 + -0.3 1,595,760 - +1.5 1,595,846 + IAI46_07550 0.11 +0.7 1,595,871 + IAI46_07550 0.15 +1.7 1,595,913 + IAI46_07550 0.23 +0.7 1,595,992 + IAI46_07550 0.38 +0.9 1,596,013 - IAI46_07550 0.42 +1.5 1,596,045 - IAI46_07550 0.48 +0.6 1,596,045 - IAI46_07550 0.48 +0.1 1,596,050 - IAI46_07550 0.49 -1.4 1,596,064 - IAI46_07550 0.51 -0.6 1,596,064 - IAI46_07550 0.51 +0.4 1,596,304 - -1.0 1,596,391 - +0.6
Or see this region's nucleotide sequence