Experiment: Uranyl Acetate Dihydrate 200 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_05170 and IAI46_05175 are separated by 112 nucleotides IAI46_05175 and IAI46_05180 are separated by 12 nucleotides IAI46_05180 and IAI46_05185 are separated by 178 nucleotides
IAI46_05170: IAI46_05170 - metal ABC transporter substrate-binding protein, at 1,111,305 to 1,112,183
_05170
IAI46_05175: IAI46_05175 - 50S ribosomal protein L36, at 1,112,296 to 1,112,436
_05175
IAI46_05180: IAI46_05180 - type B 50S ribosomal protein L31, at 1,112,449 to 1,112,703
_05180
IAI46_05185: IAI46_05185 - multidrug efflux RND transporter permease subunit SdeY, at 1,112,882 to 1,116,028
_05185
Position (kb)
1112
1113 Strain fitness (log2 ratio)
-1
0
1
2 at 1111.546 kb on + strand, within IAI46_05170 at 1111.591 kb on - strand, within IAI46_05170 at 1111.592 kb on + strand, within IAI46_05170 at 1111.593 kb on - strand, within IAI46_05170 at 1111.593 kb on - strand, within IAI46_05170 at 1111.704 kb on + strand, within IAI46_05170 at 1111.782 kb on + strand, within IAI46_05170 at 1111.783 kb on - strand, within IAI46_05170 at 1111.783 kb on - strand, within IAI46_05170 at 1111.853 kb on + strand, within IAI46_05170 at 1111.854 kb on - strand, within IAI46_05170 at 1112.086 kb on + strand, within IAI46_05170 at 1112.087 kb on - strand, within IAI46_05170 at 1112.087 kb on - strand, within IAI46_05170 at 1112.087 kb on - strand, within IAI46_05170 at 1112.088 kb on + strand, within IAI46_05170 at 1112.088 kb on + strand, within IAI46_05170 at 1112.089 kb on - strand, within IAI46_05170 at 1112.131 kb on - strand at 1112.131 kb on - strand at 1112.175 kb on - strand at 1112.297 kb on + strand at 1112.298 kb on - strand at 1112.329 kb on - strand, within IAI46_05175 at 1112.358 kb on - strand, within IAI46_05175 at 1112.535 kb on - strand, within IAI46_05180 at 1112.535 kb on - strand, within IAI46_05180 at 1112.535 kb on - strand, within IAI46_05180 at 1112.535 kb on - strand, within IAI46_05180 at 1112.537 kb on + strand, within IAI46_05180 at 1112.537 kb on + strand, within IAI46_05180 at 1112.566 kb on - strand, within IAI46_05180 at 1112.573 kb on + strand, within IAI46_05180 at 1112.573 kb on + strand, within IAI46_05180 at 1112.574 kb on - strand, within IAI46_05180 at 1112.574 kb on - strand, within IAI46_05180 at 1112.666 kb on - strand, within IAI46_05180 at 1112.673 kb on + strand, within IAI46_05180 at 1112.691 kb on + strand at 1112.691 kb on + strand at 1112.770 kb on - strand at 1112.770 kb on - strand at 1112.794 kb on - strand at 1112.843 kb on + strand at 1112.844 kb on - strand at 1112.880 kb on + strand at 1112.881 kb on - strand at 1112.912 kb on + strand at 1112.912 kb on + strand at 1113.124 kb on + strand at 1113.124 kb on + strand at 1113.125 kb on - strand at 1113.125 kb on - strand at 1113.125 kb on - strand at 1113.129 kb on - strand at 1113.129 kb on - strand at 1113.138 kb on - strand at 1113.138 kb on - strand at 1113.227 kb on + strand, within IAI46_05185 at 1113.227 kb on + strand, within IAI46_05185 at 1113.228 kb on - strand, within IAI46_05185 at 1113.228 kb on - strand, within IAI46_05185 at 1113.228 kb on - strand, within IAI46_05185 at 1113.228 kb on - strand, within IAI46_05185 at 1113.228 kb on - strand, within IAI46_05185 at 1113.228 kb on - strand, within IAI46_05185 at 1113.228 kb on - strand, within IAI46_05185 at 1113.256 kb on - strand, within IAI46_05185 at 1113.357 kb on + strand, within IAI46_05185 at 1113.357 kb on + strand, within IAI46_05185 at 1113.381 kb on - strand, within IAI46_05185 at 1113.402 kb on + strand, within IAI46_05185 at 1113.402 kb on + strand, within IAI46_05185 at 1113.403 kb on - strand, within IAI46_05185 at 1113.441 kb on + strand, within IAI46_05185 at 1113.448 kb on + strand, within IAI46_05185 at 1113.524 kb on - strand, within IAI46_05185 at 1113.574 kb on + strand, within IAI46_05185 at 1113.575 kb on - strand, within IAI46_05185 at 1113.575 kb on - strand, within IAI46_05185 at 1113.577 kb on - strand, within IAI46_05185 at 1113.601 kb on - strand, within IAI46_05185 at 1113.617 kb on - strand, within IAI46_05185 at 1113.670 kb on + strand, within IAI46_05185 at 1113.670 kb on + strand, within IAI46_05185 at 1113.671 kb on - strand, within IAI46_05185 at 1113.676 kb on + strand, within IAI46_05185 at 1113.677 kb on - strand, within IAI46_05185
Per-strain Table
Position Strand Gene LocusTag Fraction Uranyl Acetate Dihydrate 200 uM, aerobic remove 1,111,546 + IAI46_05170 0.27 +0.2 1,111,591 - IAI46_05170 0.33 +0.6 1,111,592 + IAI46_05170 0.33 +1.4 1,111,593 - IAI46_05170 0.33 -1.1 1,111,593 - IAI46_05170 0.33 +0.4 1,111,704 + IAI46_05170 0.45 +0.7 1,111,782 + IAI46_05170 0.54 -0.2 1,111,783 - IAI46_05170 0.54 -0.8 1,111,783 - IAI46_05170 0.54 +0.2 1,111,853 + IAI46_05170 0.62 -0.5 1,111,854 - IAI46_05170 0.62 -1.1 1,112,086 + IAI46_05170 0.89 -0.7 1,112,087 - IAI46_05170 0.89 +0.9 1,112,087 - IAI46_05170 0.89 -0.8 1,112,087 - IAI46_05170 0.89 -1.2 1,112,088 + IAI46_05170 0.89 -0.9 1,112,088 + IAI46_05170 0.89 -0.7 1,112,089 - IAI46_05170 0.89 +0.8 1,112,131 - +0.5 1,112,131 - +0.4 1,112,175 - -0.4 1,112,297 + +0.2 1,112,298 - -0.2 1,112,329 - IAI46_05175 0.23 +0.7 1,112,358 - IAI46_05175 0.44 -1.5 1,112,535 - IAI46_05180 0.34 -0.7 1,112,535 - IAI46_05180 0.34 -0.1 1,112,535 - IAI46_05180 0.34 -0.0 1,112,535 - IAI46_05180 0.34 +0.2 1,112,537 + IAI46_05180 0.35 +1.1 1,112,537 + IAI46_05180 0.35 -0.0 1,112,566 - IAI46_05180 0.46 +0.5 1,112,573 + IAI46_05180 0.49 +1.2 1,112,573 + IAI46_05180 0.49 +0.5 1,112,574 - IAI46_05180 0.49 +0.2 1,112,574 - IAI46_05180 0.49 -0.6 1,112,666 - IAI46_05180 0.85 -0.5 1,112,673 + IAI46_05180 0.88 -0.2 1,112,691 + +0.8 1,112,691 + +0.2 1,112,770 - -1.1 1,112,770 - -0.7 1,112,794 - -0.1 1,112,843 + +0.2 1,112,844 - -0.2 1,112,880 + -0.5 1,112,881 - +0.5 1,112,912 + +0.0 1,112,912 + +1.4 1,113,124 + +0.7 1,113,124 + +0.2 1,113,125 - +0.0 1,113,125 - -0.7 1,113,125 - +0.2 1,113,129 - -1.1 1,113,129 - -0.8 1,113,138 - -0.9 1,113,138 - +0.4 1,113,227 + IAI46_05185 0.11 +0.2 1,113,227 + IAI46_05185 0.11 +0.8 1,113,228 - IAI46_05185 0.11 -0.2 1,113,228 - IAI46_05185 0.11 -1.1 1,113,228 - IAI46_05185 0.11 +0.3 1,113,228 - IAI46_05185 0.11 -0.9 1,113,228 - IAI46_05185 0.11 -0.7 1,113,228 - IAI46_05185 0.11 +0.2 1,113,228 - IAI46_05185 0.11 -1.1 1,113,256 - IAI46_05185 0.12 -0.9 1,113,357 + IAI46_05185 0.15 -0.1 1,113,357 + IAI46_05185 0.15 -0.6 1,113,381 - IAI46_05185 0.16 +0.4 1,113,402 + IAI46_05185 0.17 +0.7 1,113,402 + IAI46_05185 0.17 +0.4 1,113,403 - IAI46_05185 0.17 +0.6 1,113,441 + IAI46_05185 0.18 +1.4 1,113,448 + IAI46_05185 0.18 -0.1 1,113,524 - IAI46_05185 0.20 -0.2 1,113,574 + IAI46_05185 0.22 +1.7 1,113,575 - IAI46_05185 0.22 +0.8 1,113,575 - IAI46_05185 0.22 +0.7 1,113,577 - IAI46_05185 0.22 -0.1 1,113,601 - IAI46_05185 0.23 -0.3 1,113,617 - IAI46_05185 0.23 -0.2 1,113,670 + IAI46_05185 0.25 +1.7 1,113,670 + IAI46_05185 0.25 +1.8 1,113,671 - IAI46_05185 0.25 +0.4 1,113,676 + IAI46_05185 0.25 -0.1 1,113,677 - IAI46_05185 0.25 +0.1
Or see this region's nucleotide sequence