Strain Fitness in Serratia liquefaciens MT49 around IAI46_01905

Experiment: Uranyl Acetate Dihydrate 200 uM, aerobic

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntIAI46_01895 and IAI46_01900 are separated by 92 nucleotidesIAI46_01900 and IAI46_01905 are separated by 7 nucleotidesIAI46_01905 and IAI46_01910 are separated by 252 nucleotidesIAI46_01910 and IAI46_01915 are separated by 77 nucleotidesIAI46_01915 and IAI46_01920 are separated by 60 nucleotides IAI46_01895: IAI46_01895 - ATP-dependent zinc metalloprotease FtsH, at 406,521 to 408,452 _01895 IAI46_01900: IAI46_01900 - dihydropteroate synthase, at 408,545 to 409,378 _01900 IAI46_01905: IAI46_01905 - phosphoglucosamine mutase, at 409,386 to 410,723 _01905 IAI46_01910: IAI46_01910 - preprotein translocase subunit SecG, at 410,976 to 411,311 _01910 IAI46_01915: IAI46_01915 - tRNA-Leu, at 411,389 to 411,475 _01915 IAI46_01920: IAI46_01920 - tRNA-Met, at 411,536 to 411,612 _01920 Position (kb) 409 410 411Strain fitness (log2 ratio) -2 -1 0 1at 408.425 kb on + strandat 408.425 kb on + strandat 408.425 kb on + strandat 408.450 kb on + strandat 408.450 kb on + strandat 408.450 kb on + strandat 408.450 kb on + strandat 408.451 kb on - strandat 408.464 kb on + strandat 408.464 kb on + strandat 408.464 kb on + strandat 408.465 kb on - strandat 408.467 kb on + strandat 408.467 kb on + strandat 408.467 kb on + strandat 408.468 kb on - strandat 408.468 kb on - strandat 408.530 kb on + strandat 408.530 kb on + strandat 408.540 kb on + strandat 408.540 kb on + strandat 410.784 kb on - strandat 410.784 kb on - strandat 410.885 kb on + strandat 410.885 kb on + strandat 410.887 kb on + strandat 410.887 kb on + strandat 410.887 kb on + strandat 410.907 kb on + strandat 410.913 kb on + strandat 410.913 kb on + strandat 410.969 kb on + strandat 410.975 kb on + strandat 410.975 kb on + strandat 410.975 kb on + strandat 410.975 kb on + strandat 410.975 kb on + strandat 410.975 kb on + strandat 411.035 kb on + strand, within IAI46_01910at 411.035 kb on + strand, within IAI46_01910at 411.323 kb on + strandat 411.346 kb on + strandat 411.349 kb on + strandat 411.357 kb on + strandat 411.357 kb on + strandat 411.488 kb on - strandat 411.517 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Uranyl Acetate Dihydrate 200 uM, aerobic
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408,425 + +0.7
408,425 + -0.2
408,425 + -0.9
408,450 + -0.7
408,450 + +0.1
408,450 + +1.3
408,450 + +0.3
408,451 - -1.0
408,464 + -0.2
408,464 + +1.0
408,464 + +0.5
408,465 - -0.1
408,467 + +1.1
408,467 + +0.4
408,467 + -0.4
408,468 - -2.7
408,468 - -1.2
408,530 + +0.6
408,530 + +1.3
408,540 + -1.6
408,540 + -0.1
410,784 - +0.4
410,784 - +0.0
410,885 + -0.4
410,885 + -0.1
410,887 + -1.6
410,887 + +0.5
410,887 + +0.1
410,907 + +0.1
410,913 + +0.7
410,913 + +0.5
410,969 + +0.2
410,975 + +1.0
410,975 + -0.2
410,975 + -1.0
410,975 + +1.7
410,975 + -0.1
410,975 + +0.5
411,035 + IAI46_01910 0.18 +0.6
411,035 + IAI46_01910 0.18 +0.3
411,323 + +0.1
411,346 + -0.2
411,349 + -0.6
411,357 + -0.4
411,357 + +0.6
411,488 - -1.8
411,517 + +0.4

Or see this region's nucleotide sequence