Strain Fitness in Serratia liquefaciens MT49 around IAI46_00670

Experiment: Uranyl Acetate Dihydrate 200 uM, aerobic

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntIAI46_00650 and IAI46_00655 are separated by 135 nucleotidesIAI46_00655 and IAI46_00660 are separated by 62 nucleotidesIAI46_00660 and IAI46_00665 are separated by 43 nucleotidesIAI46_00665 and IAI46_00670 are separated by 74 nucleotidesIAI46_00670 and IAI46_00680 are separated by 972 nucleotides IAI46_00650: IAI46_00650 - amino acid permease, at 153,475 to 154,878 _00650 IAI46_00655: IAI46_00655 - tRNA-Arg, at 155,014 to 155,090 _00655 IAI46_00660: IAI46_00660 - tRNA-His, at 155,153 to 155,228 _00660 IAI46_00665: IAI46_00665 - tRNA-Leu, at 155,272 to 155,358 _00665 IAI46_00670: IAI46_00670 - tRNA-Pro, at 155,433 to 155,509 _00670 IAI46_00680: IAI46_00680 - protoheme IX biogenesis protein HemY, at 156,482 to 157,675 _00680 Position (kb) 155 156Strain fitness (log2 ratio) -1 0 1 2 3at 154.511 kb on + strand, within IAI46_00650at 154.528 kb on - strand, within IAI46_00650at 154.531 kb on + strand, within IAI46_00650at 154.532 kb on - strand, within IAI46_00650at 154.564 kb on + strand, within IAI46_00650at 154.564 kb on + strand, within IAI46_00650at 154.565 kb on - strand, within IAI46_00650at 154.565 kb on - strand, within IAI46_00650at 154.570 kb on + strand, within IAI46_00650at 154.570 kb on + strand, within IAI46_00650at 154.570 kb on + strand, within IAI46_00650at 154.571 kb on - strand, within IAI46_00650at 154.630 kb on + strand, within IAI46_00650at 154.631 kb on - strand, within IAI46_00650at 154.674 kb on + strand, within IAI46_00650at 154.675 kb on - strand, within IAI46_00650at 154.675 kb on - strand, within IAI46_00650at 154.683 kb on + strand, within IAI46_00650at 154.684 kb on - strand, within IAI46_00650at 154.684 kb on - strand, within IAI46_00650at 154.684 kb on - strand, within IAI46_00650at 154.684 kb on - strand, within IAI46_00650at 154.684 kb on - strand, within IAI46_00650at 154.684 kb on - strand, within IAI46_00650at 154.693 kb on + strand, within IAI46_00650at 154.693 kb on + strand, within IAI46_00650at 154.693 kb on + strand, within IAI46_00650at 154.693 kb on + strand, within IAI46_00650at 154.694 kb on - strand, within IAI46_00650at 154.694 kb on - strand, within IAI46_00650at 154.694 kb on - strand, within IAI46_00650at 154.694 kb on - strand, within IAI46_00650at 154.702 kb on + strand, within IAI46_00650at 154.702 kb on + strand, within IAI46_00650at 154.702 kb on + strand, within IAI46_00650at 154.702 kb on + strand, within IAI46_00650at 154.702 kb on + strand, within IAI46_00650at 154.702 kb on + strand, within IAI46_00650at 154.702 kb on + strand, within IAI46_00650at 154.703 kb on - strand, within IAI46_00650at 154.703 kb on - strand, within IAI46_00650at 154.703 kb on - strand, within IAI46_00650at 154.813 kb on + strandat 154.813 kb on + strandat 154.933 kb on - strandat 155.234 kb on + strandat 155.234 kb on + strandat 155.322 kb on + strand, within IAI46_00665at 155.396 kb on + strandat 155.416 kb on + strandat 155.416 kb on + strandat 155.543 kb on + strandat 155.551 kb on + strandat 155.551 kb on + strandat 155.551 kb on + strandat 155.551 kb on + strandat 155.551 kb on + strandat 155.552 kb on - strandat 155.552 kb on - strandat 155.552 kb on - strandat 155.558 kb on + strandat 155.558 kb on + strandat 155.558 kb on + strandat 155.559 kb on - strandat 155.727 kb on + strandat 155.761 kb on + strandat 155.761 kb on + strandat 155.770 kb on + strandat 155.771 kb on - strandat 155.850 kb on - strandat 155.931 kb on - strandat 155.997 kb on + strandat 156.065 kb on + strandat 156.066 kb on - strandat 156.066 kb on - strandat 156.066 kb on - strandat 156.069 kb on + strandat 156.070 kb on - strandat 156.070 kb on - strandat 156.070 kb on - strandat 156.070 kb on - strandat 156.070 kb on - strandat 156.070 kb on - strandat 156.070 kb on - strandat 156.070 kb on - strandat 156.070 kb on - strandat 156.070 kb on - strandat 156.089 kb on + strandat 156.089 kb on + strandat 156.089 kb on + strandat 156.089 kb on + strandat 156.089 kb on + strandat 156.089 kb on + strandat 156.090 kb on - strandat 156.090 kb on - strandat 156.090 kb on - strandat 156.090 kb on - strandat 156.100 kb on + strandat 156.101 kb on - strandat 156.110 kb on - strandat 156.138 kb on + strandat 156.148 kb on - strandat 156.148 kb on - strandat 156.148 kb on - strandat 156.257 kb on - strandat 156.296 kb on + strandat 156.296 kb on + strandat 156.296 kb on + strandat 156.296 kb on + strandat 156.297 kb on - strandat 156.297 kb on - strandat 156.297 kb on - strandat 156.297 kb on - strandat 156.305 kb on + strandat 156.404 kb on + strandat 156.405 kb on - strandat 156.405 kb on - strandat 156.408 kb on + strandat 156.408 kb on + strandat 156.408 kb on + strandat 156.408 kb on + strandat 156.409 kb on - strandat 156.409 kb on - strandat 156.409 kb on - strandat 156.409 kb on - strandat 156.409 kb on - strandat 156.418 kb on - strandat 156.418 kb on - strandat 156.418 kb on - strandat 156.419 kb on + strandat 156.419 kb on + strandat 156.419 kb on + strandat 156.420 kb on - strandat 156.430 kb on - strandat 156.430 kb on - strandat 156.434 kb on - strandat 156.434 kb on - strandat 156.434 kb on - strandat 156.506 kb on + strandat 156.507 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Uranyl Acetate Dihydrate 200 uM, aerobic
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154,511 + IAI46_00650 0.74 -0.1
154,528 - IAI46_00650 0.75 +0.5
154,531 + IAI46_00650 0.75 +1.4
154,532 - IAI46_00650 0.75 -0.4
154,564 + IAI46_00650 0.78 +0.3
154,564 + IAI46_00650 0.78 -0.5
154,565 - IAI46_00650 0.78 -0.1
154,565 - IAI46_00650 0.78 -0.1
154,570 + IAI46_00650 0.78 +0.8
154,570 + IAI46_00650 0.78 -0.3
154,570 + IAI46_00650 0.78 +0.2
154,571 - IAI46_00650 0.78 +3.0
154,630 + IAI46_00650 0.82 -0.1
154,631 - IAI46_00650 0.82 +0.6
154,674 + IAI46_00650 0.85 -0.3
154,675 - IAI46_00650 0.85 -0.1
154,675 - IAI46_00650 0.85 +0.2
154,683 + IAI46_00650 0.86 -0.1
154,684 - IAI46_00650 0.86 +1.0
154,684 - IAI46_00650 0.86 -0.1
154,684 - IAI46_00650 0.86 -0.3
154,684 - IAI46_00650 0.86 -0.1
154,684 - IAI46_00650 0.86 +1.0
154,684 - IAI46_00650 0.86 -0.2
154,693 + IAI46_00650 0.87 +0.4
154,693 + IAI46_00650 0.87 +0.6
154,693 + IAI46_00650 0.87 -0.4
154,693 + IAI46_00650 0.87 +0.1
154,694 - IAI46_00650 0.87 +0.2
154,694 - IAI46_00650 0.87 -0.2
154,694 - IAI46_00650 0.87 -0.9
154,694 - IAI46_00650 0.87 -0.2
154,702 + IAI46_00650 0.87 +0.0
154,702 + IAI46_00650 0.87 +0.4
154,702 + IAI46_00650 0.87 -0.2
154,702 + IAI46_00650 0.87 -0.2
154,702 + IAI46_00650 0.87 +1.3
154,702 + IAI46_00650 0.87 -0.3
154,702 + IAI46_00650 0.87 +0.8
154,703 - IAI46_00650 0.87 -0.5
154,703 - IAI46_00650 0.87 +0.5
154,703 - IAI46_00650 0.87 -0.2
154,813 + +0.7
154,813 + -0.1
154,933 - +1.2
155,234 + +0.2
155,234 + -0.4
155,322 + IAI46_00665 0.57 -1.0
155,396 + +0.1
155,416 + +0.4
155,416 + -0.3
155,543 + +1.1
155,551 + +0.2
155,551 + +0.5
155,551 + -1.0
155,551 + +0.4
155,551 + +0.2
155,552 - +0.6
155,552 - -0.5
155,552 - +0.4
155,558 + +1.2
155,558 + -1.6
155,558 + -0.4
155,559 - -0.2
155,727 + +0.6
155,761 + +0.2
155,761 + +0.5
155,770 + +0.1
155,771 - +0.1
155,850 - -0.6
155,931 - +0.8
155,997 + +0.2
156,065 + +0.0
156,066 - +1.6
156,066 - -0.4
156,066 - -0.3
156,069 + -1.5
156,070 - -0.3
156,070 - +0.4
156,070 - +0.8
156,070 - +0.4
156,070 - +1.8
156,070 - +2.0
156,070 - +0.8
156,070 - +0.9
156,070 - +0.7
156,070 - +0.6
156,089 + +0.2
156,089 + -0.4
156,089 + -0.2
156,089 + -0.1
156,089 + -0.2
156,089 + -0.0
156,090 - -0.1
156,090 - -0.5
156,090 - +1.0
156,090 - +0.6
156,100 + -0.3
156,101 - -0.3
156,110 - +0.3
156,138 + +0.0
156,148 - +0.1
156,148 - +0.1
156,148 - +0.7
156,257 - +0.1
156,296 + +1.1
156,296 + -1.0
156,296 + +0.4
156,296 + -0.1
156,297 - -0.8
156,297 - +0.1
156,297 - +0.4
156,297 - +0.5
156,305 + -0.2
156,404 + +0.8
156,405 - -0.2
156,405 - -0.1
156,408 + +1.4
156,408 + +0.2
156,408 + -1.0
156,408 + +0.3
156,409 - +0.0
156,409 - +0.1
156,409 - +0.3
156,409 - +0.1
156,409 - +0.3
156,418 - +0.3
156,418 - -0.3
156,418 - +0.0
156,419 + +1.0
156,419 + -0.5
156,419 + +0.0
156,420 - +0.6
156,430 - -0.5
156,430 - +0.2
156,434 - +0.6
156,434 - -0.2
156,434 - +0.6
156,506 + -0.7
156,507 - -0.0

Or see this region's nucleotide sequence