Experiment: m.b. Paraquat dichloride 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_4663 and Echvi_4664 are separated by 101 nucleotides Echvi_4664 and Echvi_4665 are separated by 8 nucleotides Echvi_4665 and Echvi_4666 are separated by 68 nucleotides Echvi_4666 and Echvi_4667 are separated by 84 nucleotides
Echvi_4663: Echvi_4663 - hypothetical protein, at 5,582,139 to 5,583,764
_4663
Echvi_4664: Echvi_4664 - Histidinol phosphatase and related hydrolases of the PHP family, at 5,583,866 to 5,585,572
_4664
Echvi_4665: Echvi_4665 - hypothetical protein, at 5,585,581 to 5,585,868
_4665
Echvi_4666: Echvi_4666 - Cold shock proteins, at 5,585,937 to 5,586,128
_4666
Echvi_4667: Echvi_4667 - Phosphohistidine phosphatase SixA, at 5,586,213 to 5,586,701
_4667
Position (kb)
5583
5584
5585
5586 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 5582.870 kb on - strand, within Echvi_4663 at 5582.870 kb on - strand, within Echvi_4663 at 5582.870 kb on - strand, within Echvi_4663 at 5582.873 kb on + strand, within Echvi_4663 at 5582.917 kb on + strand, within Echvi_4663 at 5582.948 kb on - strand, within Echvi_4663 at 5582.948 kb on - strand, within Echvi_4663 at 5582.991 kb on + strand, within Echvi_4663 at 5582.991 kb on + strand, within Echvi_4663 at 5583.008 kb on - strand, within Echvi_4663 at 5583.008 kb on - strand, within Echvi_4663 at 5583.116 kb on + strand, within Echvi_4663 at 5583.134 kb on + strand, within Echvi_4663 at 5583.136 kb on + strand, within Echvi_4663 at 5583.137 kb on - strand, within Echvi_4663 at 5583.192 kb on + strand, within Echvi_4663 at 5583.192 kb on + strand, within Echvi_4663 at 5583.203 kb on + strand, within Echvi_4663 at 5583.203 kb on + strand, within Echvi_4663 at 5583.203 kb on + strand, within Echvi_4663 at 5583.203 kb on + strand, within Echvi_4663 at 5583.204 kb on - strand, within Echvi_4663 at 5583.220 kb on + strand, within Echvi_4663 at 5583.222 kb on + strand, within Echvi_4663 at 5583.223 kb on - strand, within Echvi_4663 at 5583.223 kb on - strand, within Echvi_4663 at 5583.223 kb on - strand, within Echvi_4663 at 5583.451 kb on + strand, within Echvi_4663 at 5583.451 kb on + strand, within Echvi_4663 at 5583.452 kb on - strand, within Echvi_4663 at 5583.452 kb on - strand, within Echvi_4663 at 5583.452 kb on - strand, within Echvi_4663 at 5583.457 kb on + strand, within Echvi_4663 at 5583.458 kb on - strand, within Echvi_4663 at 5583.494 kb on - strand, within Echvi_4663 at 5583.514 kb on + strand, within Echvi_4663 at 5583.515 kb on - strand, within Echvi_4663 at 5583.531 kb on + strand, within Echvi_4663 at 5583.531 kb on + strand, within Echvi_4663 at 5583.532 kb on - strand, within Echvi_4663 at 5583.532 kb on - strand, within Echvi_4663 at 5583.607 kb on - strand at 5583.612 kb on - strand at 5583.612 kb on - strand at 5583.638 kb on - strand at 5583.688 kb on - strand at 5583.688 kb on - strand at 5583.756 kb on + strand at 5583.765 kb on - strand at 5583.787 kb on - strand at 5583.787 kb on - strand at 5583.787 kb on - strand at 5583.792 kb on - strand at 5583.798 kb on - strand at 5583.798 kb on - strand at 5583.820 kb on - strand at 5583.823 kb on + strand at 5583.921 kb on + strand at 5583.922 kb on - strand at 5583.922 kb on - strand at 5583.922 kb on - strand at 5583.922 kb on - strand at 5583.934 kb on + strand at 5583.934 kb on + strand at 5583.935 kb on - strand at 5583.953 kb on + strand at 5583.954 kb on - strand at 5583.954 kb on - strand at 5583.956 kb on - strand at 5583.966 kb on + strand at 5583.969 kb on - strand at 5583.969 kb on - strand at 5583.985 kb on + strand at 5583.986 kb on - strand at 5583.986 kb on - strand at 5583.989 kb on - strand at 5584.094 kb on + strand, within Echvi_4664 at 5584.094 kb on + strand, within Echvi_4664 at 5584.095 kb on - strand, within Echvi_4664 at 5584.095 kb on - strand, within Echvi_4664 at 5584.289 kb on - strand, within Echvi_4664 at 5584.335 kb on - strand, within Echvi_4664 at 5584.412 kb on - strand, within Echvi_4664 at 5584.481 kb on - strand, within Echvi_4664 at 5584.481 kb on - strand, within Echvi_4664 at 5584.697 kb on + strand, within Echvi_4664 at 5584.698 kb on - strand, within Echvi_4664 at 5584.698 kb on - strand, within Echvi_4664 at 5584.702 kb on + strand, within Echvi_4664 at 5584.758 kb on - strand, within Echvi_4664 at 5584.758 kb on - strand, within Echvi_4664 at 5584.857 kb on + strand, within Echvi_4664 at 5584.874 kb on + strand, within Echvi_4664 at 5584.891 kb on + strand, within Echvi_4664 at 5584.892 kb on - strand, within Echvi_4664 at 5584.892 kb on - strand, within Echvi_4664 at 5584.892 kb on - strand, within Echvi_4664 at 5584.892 kb on - strand, within Echvi_4664 at 5584.932 kb on - strand, within Echvi_4664 at 5584.937 kb on + strand, within Echvi_4664 at 5584.973 kb on + strand, within Echvi_4664 at 5584.974 kb on - strand, within Echvi_4664 at 5585.142 kb on + strand, within Echvi_4664 at 5585.143 kb on - strand, within Echvi_4664 at 5585.143 kb on - strand, within Echvi_4664 at 5585.287 kb on + strand, within Echvi_4664 at 5585.288 kb on - strand, within Echvi_4664 at 5585.456 kb on + strand at 5585.457 kb on - strand at 5585.457 kb on - strand at 5585.488 kb on + strand at 5585.488 kb on + strand at 5585.489 kb on - strand at 5585.580 kb on + strand at 5585.581 kb on - strand at 5585.604 kb on + strand at 5585.607 kb on + strand at 5585.607 kb on + strand at 5585.637 kb on + strand, within Echvi_4665 at 5585.638 kb on - strand, within Echvi_4665 at 5585.642 kb on + strand, within Echvi_4665 at 5585.643 kb on - strand, within Echvi_4665 at 5585.643 kb on - strand, within Echvi_4665 at 5585.654 kb on + strand, within Echvi_4665 at 5585.655 kb on - strand, within Echvi_4665 at 5585.767 kb on + strand, within Echvi_4665 at 5585.768 kb on - strand, within Echvi_4665 at 5585.768 kb on - strand, within Echvi_4665 at 5585.768 kb on - strand, within Echvi_4665 at 5585.768 kb on - strand, within Echvi_4665 at 5585.856 kb on + strand at 5585.856 kb on + strand at 5585.867 kb on - strand at 5585.867 kb on - strand at 5585.955 kb on + strand at 5585.955 kb on + strand at 5585.992 kb on + strand, within Echvi_4666 at 5585.993 kb on - strand, within Echvi_4666 at 5585.993 kb on - strand, within Echvi_4666 at 5585.993 kb on - strand, within Echvi_4666 at 5585.993 kb on - strand, within Echvi_4666 at 5586.131 kb on + strand at 5586.135 kb on + strand at 5586.135 kb on + strand at 5586.149 kb on + strand at 5586.227 kb on + strand at 5586.264 kb on + strand, within Echvi_4667 at 5586.264 kb on + strand, within Echvi_4667 at 5586.264 kb on + strand, within Echvi_4667 at 5586.264 kb on + strand, within Echvi_4667 at 5586.265 kb on - strand, within Echvi_4667 at 5586.267 kb on - strand, within Echvi_4667 at 5586.267 kb on - strand, within Echvi_4667 at 5586.304 kb on + strand, within Echvi_4667 at 5586.341 kb on - strand, within Echvi_4667 at 5586.348 kb on - strand, within Echvi_4667 at 5586.462 kb on + strand, within Echvi_4667 at 5586.463 kb on - strand, within Echvi_4667 at 5586.488 kb on - strand, within Echvi_4667 at 5586.518 kb on + strand, within Echvi_4667 at 5586.543 kb on - strand, within Echvi_4667 at 5586.543 kb on - strand, within Echvi_4667 at 5586.543 kb on - strand, within Echvi_4667 at 5586.543 kb on - strand, within Echvi_4667 at 5586.555 kb on - strand, within Echvi_4667 at 5586.555 kb on - strand, within Echvi_4667 at 5586.562 kb on + strand, within Echvi_4667 at 5586.562 kb on + strand, within Echvi_4667 at 5586.562 kb on + strand, within Echvi_4667
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.25 mg/ml remove 5,582,870 - Echvi_4663 0.45 +1.1 5,582,870 - Echvi_4663 0.45 -1.1 5,582,870 - Echvi_4663 0.45 -0.3 5,582,873 + Echvi_4663 0.45 -0.2 5,582,917 + Echvi_4663 0.48 +0.4 5,582,948 - Echvi_4663 0.50 -0.0 5,582,948 - Echvi_4663 0.50 -0.0 5,582,991 + Echvi_4663 0.52 -0.1 5,582,991 + Echvi_4663 0.52 +0.0 5,583,008 - Echvi_4663 0.53 -0.5 5,583,008 - Echvi_4663 0.53 -0.3 5,583,116 + Echvi_4663 0.60 +0.4 5,583,134 + Echvi_4663 0.61 +0.6 5,583,136 + Echvi_4663 0.61 +0.4 5,583,137 - Echvi_4663 0.61 -0.3 5,583,192 + Echvi_4663 0.65 -0.4 5,583,192 + Echvi_4663 0.65 -0.7 5,583,203 + Echvi_4663 0.65 +0.4 5,583,203 + Echvi_4663 0.65 -0.4 5,583,203 + Echvi_4663 0.65 -0.3 5,583,203 + Echvi_4663 0.65 +1.4 5,583,204 - Echvi_4663 0.65 +0.8 5,583,220 + Echvi_4663 0.66 -0.1 5,583,222 + Echvi_4663 0.67 -0.2 5,583,223 - Echvi_4663 0.67 -0.1 5,583,223 - Echvi_4663 0.67 -2.2 5,583,223 - Echvi_4663 0.67 +0.8 5,583,451 + Echvi_4663 0.81 +0.1 5,583,451 + Echvi_4663 0.81 +0.9 5,583,452 - Echvi_4663 0.81 +0.3 5,583,452 - Echvi_4663 0.81 -0.0 5,583,452 - Echvi_4663 0.81 +0.5 5,583,457 + Echvi_4663 0.81 +1.4 5,583,458 - Echvi_4663 0.81 +0.6 5,583,494 - Echvi_4663 0.83 -0.2 5,583,514 + Echvi_4663 0.85 +0.3 5,583,515 - Echvi_4663 0.85 -0.2 5,583,531 + Echvi_4663 0.86 +0.1 5,583,531 + Echvi_4663 0.86 +0.5 5,583,532 - Echvi_4663 0.86 +0.9 5,583,532 - Echvi_4663 0.86 +0.2 5,583,607 - +0.6 5,583,612 - +0.3 5,583,612 - -0.5 5,583,638 - +0.4 5,583,688 - +0.9 5,583,688 - -1.1 5,583,756 + -0.9 5,583,765 - -1.7 5,583,787 - +0.1 5,583,787 - -0.4 5,583,787 - -0.5 5,583,792 - -0.5 5,583,798 - -1.8 5,583,798 - +0.1 5,583,820 - -1.3 5,583,823 + +0.2 5,583,921 + -0.3 5,583,922 - +0.3 5,583,922 - -2.6 5,583,922 - +0.1 5,583,922 - -3.5 5,583,934 + +0.3 5,583,934 + -1.0 5,583,935 - -1.1 5,583,953 + -0.5 5,583,954 - -2.6 5,583,954 - -1.5 5,583,956 - +0.1 5,583,966 + -0.1 5,583,969 - -1.2 5,583,969 - -1.8 5,583,985 + +0.8 5,583,986 - -2.9 5,583,986 - -1.0 5,583,989 - -1.8 5,584,094 + Echvi_4664 0.13 -1.2 5,584,094 + Echvi_4664 0.13 -0.6 5,584,095 - Echvi_4664 0.13 -0.7 5,584,095 - Echvi_4664 0.13 -1.6 5,584,289 - Echvi_4664 0.25 -1.2 5,584,335 - Echvi_4664 0.27 -0.1 5,584,412 - Echvi_4664 0.32 -1.1 5,584,481 - Echvi_4664 0.36 -0.1 5,584,481 - Echvi_4664 0.36 -0.9 5,584,697 + Echvi_4664 0.49 -0.1 5,584,698 - Echvi_4664 0.49 -0.1 5,584,698 - Echvi_4664 0.49 +0.3 5,584,702 + Echvi_4664 0.49 -0.4 5,584,758 - Echvi_4664 0.52 -0.4 5,584,758 - Echvi_4664 0.52 -0.8 5,584,857 + Echvi_4664 0.58 +0.8 5,584,874 + Echvi_4664 0.59 -0.3 5,584,891 + Echvi_4664 0.60 -2.5 5,584,892 - Echvi_4664 0.60 +0.5 5,584,892 - Echvi_4664 0.60 +1.0 5,584,892 - Echvi_4664 0.60 -1.2 5,584,892 - Echvi_4664 0.60 -1.8 5,584,932 - Echvi_4664 0.62 +0.2 5,584,937 + Echvi_4664 0.63 -0.3 5,584,973 + Echvi_4664 0.65 -1.1 5,584,974 - Echvi_4664 0.65 -1.9 5,585,142 + Echvi_4664 0.75 -2.5 5,585,143 - Echvi_4664 0.75 -2.0 5,585,143 - Echvi_4664 0.75 +0.7 5,585,287 + Echvi_4664 0.83 -1.7 5,585,288 - Echvi_4664 0.83 -1.0 5,585,456 + -0.7 5,585,457 - -0.1 5,585,457 - -1.4 5,585,488 + -1.1 5,585,488 + -2.5 5,585,489 - -2.1 5,585,580 + +0.8 5,585,581 - +0.5 5,585,604 + +0.8 5,585,607 + -0.2 5,585,607 + -0.7 5,585,637 + Echvi_4665 0.19 -0.0 5,585,638 - Echvi_4665 0.20 +0.3 5,585,642 + Echvi_4665 0.21 +0.0 5,585,643 - Echvi_4665 0.22 +0.3 5,585,643 - Echvi_4665 0.22 -0.3 5,585,654 + Echvi_4665 0.25 -0.5 5,585,655 - Echvi_4665 0.26 -1.0 5,585,767 + Echvi_4665 0.65 -0.7 5,585,768 - Echvi_4665 0.65 +0.8 5,585,768 - Echvi_4665 0.65 +0.2 5,585,768 - Echvi_4665 0.65 -1.2 5,585,768 - Echvi_4665 0.65 +0.7 5,585,856 + -0.3 5,585,856 + -0.8 5,585,867 - +0.3 5,585,867 - +0.2 5,585,955 + -1.7 5,585,955 + +0.7 5,585,992 + Echvi_4666 0.29 +0.2 5,585,993 - Echvi_4666 0.29 +0.3 5,585,993 - Echvi_4666 0.29 +0.2 5,585,993 - Echvi_4666 0.29 -0.0 5,585,993 - Echvi_4666 0.29 -0.4 5,586,131 + -1.4 5,586,135 + -0.2 5,586,135 + +0.7 5,586,149 + -0.8 5,586,227 + +0.2 5,586,264 + Echvi_4667 0.10 -0.9 5,586,264 + Echvi_4667 0.10 -0.0 5,586,264 + Echvi_4667 0.10 +1.8 5,586,264 + Echvi_4667 0.10 -0.2 5,586,265 - Echvi_4667 0.11 -0.6 5,586,267 - Echvi_4667 0.11 +0.2 5,586,267 - Echvi_4667 0.11 +0.2 5,586,304 + Echvi_4667 0.19 -0.1 5,586,341 - Echvi_4667 0.26 +0.1 5,586,348 - Echvi_4667 0.28 -0.5 5,586,462 + Echvi_4667 0.51 -1.1 5,586,463 - Echvi_4667 0.51 -0.7 5,586,488 - Echvi_4667 0.56 -0.1 5,586,518 + Echvi_4667 0.62 +0.2 5,586,543 - Echvi_4667 0.67 +0.6 5,586,543 - Echvi_4667 0.67 +1.3 5,586,543 - Echvi_4667 0.67 -0.7 5,586,543 - Echvi_4667 0.67 +0.0 5,586,555 - Echvi_4667 0.70 +1.3 5,586,555 - Echvi_4667 0.70 +0.5 5,586,562 + Echvi_4667 0.71 +0.1 5,586,562 + Echvi_4667 0.71 -0.2 5,586,562 + Echvi_4667 0.71 -0.0
Or see this region's nucleotide sequence