Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4500

Experiment: m.b. Paraquat dichloride 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Paraquat dichloride 0.25 mg/ml
5,376,693	-				+0.5
5,376,694	+				+0.5
5,376,695	-				+0.3
5,376,695	-				+0.5
5,376,708	-				-0.5
5,376,788	+		Echvi_4499	0.14	+0.3
5,376,833	-		Echvi_4499	0.19	+0.6
5,376,844	+		Echvi_4499	0.20	+0.2
5,376,845	-		Echvi_4499	0.21	-0.5
5,376,853	+		Echvi_4499	0.22	-0.5
5,376,921	+		Echvi_4499	0.30	-0.9
5,376,922	-		Echvi_4499	0.30	-0.2
5,376,923	+		Echvi_4499	0.30	-0.8
5,376,923	+		Echvi_4499	0.30	-2.4
5,376,923	+		Echvi_4499	0.30	+0.3
5,376,923	+		Echvi_4499	0.30	-0.6
5,376,923	+		Echvi_4499	0.30	+0.5
5,376,923	+		Echvi_4499	0.30	-0.5
5,376,924	-		Echvi_4499	0.30	+0.6
5,376,953	-		Echvi_4499	0.33	+0.3
5,376,956	+		Echvi_4499	0.34	+0.8
5,376,956	+		Echvi_4499	0.34	-1.0
5,376,970	+		Echvi_4499	0.35	+0.8
5,377,072	+		Echvi_4499	0.48	-0.5
5,377,073	-		Echvi_4499	0.48	-0.3
5,377,073	-		Echvi_4499	0.48	+0.0
5,377,074	+		Echvi_4499	0.48	-0.6
5,377,074	+		Echvi_4499	0.48	+0.2
5,377,075	-		Echvi_4499	0.48	-0.1
5,377,075	-		Echvi_4499	0.48	+0.5
5,377,075	-		Echvi_4499	0.48	-1.1
5,377,075	-		Echvi_4499	0.48	+0.5
5,377,092	+		Echvi_4499	0.50	-1.2
5,377,092	+		Echvi_4499	0.50	+0.5
5,377,094	+		Echvi_4499	0.50	-0.6
5,377,095	-		Echvi_4499	0.50	+0.4
5,377,251	-		Echvi_4499	0.69	-1.3
5,377,265	-		Echvi_4499	0.71	-0.3
5,377,367	+		Echvi_4499	0.83	+0.2
5,377,395	-		Echvi_4499	0.86	-0.9
5,377,414	+		Echvi_4499	0.88	+0.5
5,377,415	-		Echvi_4499	0.88	-0.1
5,377,426	+		Echvi_4499	0.90	-1.3
5,377,427	-		Echvi_4499	0.90	+0.5
5,377,429	+				-1.3
5,377,429	+				+0.1
5,377,430	-				+1.2
5,377,430	-				+1.9
5,377,430	-				+0.2
5,377,430	-				+1.2
5,377,430	-				-0.3
5,377,515	-				+0.2
5,377,515	-				+1.0
5,377,574	+				-1.1
5,377,574	+				+0.3
5,377,576	+				+1.6
5,377,576	+				-1.5
5,377,577	-				+0.9
5,377,577	-				+1.7
5,377,581	+				-1.1
5,377,581	+				+0.9
5,377,588	-				-0.5
5,377,588	-				+0.5
5,377,640	+				-0.6
5,377,640	+				-0.5
5,377,640	+				+0.8
5,377,641	-				+0.4
5,377,647	-				+0.5
5,377,647	-				+2.2
5,377,745	-		Echvi_4500	0.31	-2.3
5,377,795	-		Echvi_4500	0.43	-0.8
5,377,795	-		Echvi_4500	0.43	-0.3
5,377,862	+		Echvi_4500	0.60	-0.7
5,377,903	+		Echvi_4500	0.70	-1.1
5,377,960	-		Echvi_4500	0.84	-0.1
5,377,971	+		Echvi_4500	0.87	-0.2
5,378,117	-				-0.3
5,378,133	+				+0.2
5,378,153	+				-1.0
5,378,154	-				+0.6
5,378,154	-				-0.2
5,378,239	-		Echvi_4502	0.15	+0.6
5,378,343	+		Echvi_4502	0.27	+1.3
5,378,344	-		Echvi_4502	0.27	+0.9
5,378,363	+		Echvi_4502	0.30	+0.6
5,378,374	+		Echvi_4502	0.31	-0.7
5,378,376	+		Echvi_4502	0.31	-0.4
5,378,376	+		Echvi_4502	0.31	+0.5
5,378,376	+		Echvi_4502	0.31	+1.0
5,378,377	-		Echvi_4502	0.31	+0.3
5,378,377	-		Echvi_4502	0.31	-0.1
5,378,377	-		Echvi_4502	0.31	-0.1
5,378,377	-		Echvi_4502	0.31	+0.6
5,378,377	-		Echvi_4502	0.31	+0.5
5,378,466	+		Echvi_4502	0.42	-2.8
5,378,523	+		Echvi_4502	0.49	-1.5
5,378,523	+		Echvi_4502	0.49	+0.8
5,378,523	+		Echvi_4502	0.49	-0.8
5,378,523	+		Echvi_4502	0.49	+0.4
5,378,524	-		Echvi_4502	0.49	-0.8
5,378,524	-		Echvi_4502	0.49	-0.2
5,378,524	-		Echvi_4502	0.49	+1.3
5,378,524	-		Echvi_4502	0.49	+0.3
5,378,534	+		Echvi_4502	0.50	+0.5
5,378,534	+		Echvi_4502	0.50	+0.3
5,378,755	+		Echvi_4502	0.77	+0.2
5,378,756	-		Echvi_4502	0.77	+0.2
5,378,763	-		Echvi_4502	0.78	+0.7
5,378,763	-		Echvi_4502	0.78	-0.2
5,378,782	-		Echvi_4502	0.80	+0.5
5,378,782	-		Echvi_4502	0.80	-0.2
5,378,826	+		Echvi_4502	0.85	+2.6
5,378,901	-				-0.2
5,378,967	+				-0.5
5,378,968	-				-0.4
5,378,971	+				-0.7
5,378,971	+				-1.2
5,378,971	+				+0.0
5,378,971	+				+0.2