Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2212

Experiment: m.b. Paraquat dichloride 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Paraquat dichloride 0.25 mg/ml
2,638,979	+				+0.0
2,638,980	-				+1.0
2,638,983	-				-0.3
2,639,047	-				-1.0
2,639,059	+				+0.7
2,639,060	-				-0.5
2,639,066	-				-0.0
2,639,076	-				+0.5
2,639,093	+				+0.7
2,639,097	+				-0.8
2,639,102	+				+0.5
2,639,103	-				+0.6
2,639,103	-				-0.0
2,639,143	+		Echvi_2211	0.24	+0.1
2,639,144	-		Echvi_2211	0.24	+1.5
2,639,144	-		Echvi_2211	0.24	+1.0
2,639,174	-		Echvi_2211	0.47	-0.4
2,639,174	-		Echvi_2211	0.47	+0.2
2,639,174	-		Echvi_2211	0.47	+1.3
2,639,180	-		Echvi_2211	0.51	+0.3
2,639,180	-		Echvi_2211	0.51	-0.5
2,639,182	-		Echvi_2211	0.53	-1.7
2,639,210	+		Echvi_2211	0.73	+0.2
2,639,217	+		Echvi_2211	0.79	-1.1
2,639,217	+		Echvi_2211	0.79	-1.0
2,639,217	+		Echvi_2211	0.79	+0.6
2,639,217	+		Echvi_2211	0.79	+0.0
2,639,218	-		Echvi_2211	0.79	-0.2
2,639,218	-		Echvi_2211	0.79	+0.4
2,639,218	-		Echvi_2211	0.79	+0.9
2,639,218	-		Echvi_2211	0.79	+0.0
2,639,219	+		Echvi_2211	0.80	+0.5
2,639,249	+				-0.9
2,639,249	+				-0.7
2,639,271	-				+1.0
2,639,271	-				+0.6
2,639,333	+				-0.6
2,639,333	+				-0.1
2,639,333	+				-0.8
2,639,405	-				-0.3
2,639,408	+				+0.6
2,639,408	+				+0.4
2,639,540	-				-0.2
2,639,742	+				-0.3
2,639,743	-				-2.7
2,639,743	-				+0.6
2,639,745	+				-2.5
2,639,746	-				-0.2
2,639,746	-				-0.9
2,639,746	-				-0.0
2,639,747	-				-0.6
2,639,749	-				-1.3
2,639,848	-				-0.6
2,639,848	-				-1.2
2,639,848	-				-1.7
2,639,872	-				-0.6
2,639,918	+				+0.4
2,639,919	-				-1.7
2,639,971	+				-0.7
2,639,971	+				-2.7
2,639,972	-				+0.7
2,640,027	-		Echvi_2212	0.14	-3.1
2,640,027	-		Echvi_2212	0.14	-2.4
2,640,027	-		Echvi_2212	0.14	-0.4
2,640,027	-		Echvi_2212	0.14	-1.6
2,640,027	-		Echvi_2212	0.14	-0.4
2,640,028	+		Echvi_2212	0.14	-0.6
2,640,029	-		Echvi_2212	0.14	-1.7
2,640,062	+		Echvi_2212	0.20	-1.5
2,640,062	+		Echvi_2212	0.20	-3.4
2,640,063	-		Echvi_2212	0.20	-1.8
2,640,063	-		Echvi_2212	0.20	-3.7
2,640,166	+		Echvi_2212	0.39	+0.6
2,640,166	+		Echvi_2212	0.39	-1.6
2,640,166	+		Echvi_2212	0.39	-1.7
2,640,166	+		Echvi_2212	0.39	+0.1
2,640,303	+		Echvi_2212	0.63	-2.9
2,640,303	+		Echvi_2212	0.63	-1.7
2,640,454	-				-1.6
2,640,502	+				-0.0
2,640,582	+		Echvi_2213	0.10	+0.2
2,640,583	-		Echvi_2213	0.10	-0.2
2,640,670	+		Echvi_2213	0.22	+0.6
2,640,670	+		Echvi_2213	0.22	+0.2
2,640,683	-		Echvi_2213	0.23	+0.0
2,640,683	-		Echvi_2213	0.23	-0.2
2,640,750	+		Echvi_2213	0.32	-0.3
2,640,750	+		Echvi_2213	0.32	-0.2
2,640,750	+		Echvi_2213	0.32	+0.6
2,640,751	-		Echvi_2213	0.32	-0.4
2,640,751	-		Echvi_2213	0.32	-1.5
2,640,796	+		Echvi_2213	0.38	+1.2
2,640,796	+		Echvi_2213	0.38	-0.4
2,640,797	-		Echvi_2213	0.38	+1.3
2,640,802	-		Echvi_2213	0.39	+0.8
2,640,808	+		Echvi_2213	0.40	+0.5
2,640,809	-		Echvi_2213	0.40	-1.4
2,640,831	-		Echvi_2213	0.43	+1.4
2,640,862	+		Echvi_2213	0.47	-0.3
2,640,863	-		Echvi_2213	0.47	-0.2
2,640,885	+		Echvi_2213	0.50	-0.5
2,640,885	+		Echvi_2213	0.50	+0.5
2,640,885	+		Echvi_2213	0.50	+1.6
2,640,886	-		Echvi_2213	0.50	+0.9
2,640,886	-		Echvi_2213	0.50	-0.8
2,640,886	-		Echvi_2213	0.50	+1.6
2,641,075	-		Echvi_2213	0.74	+1.3
2,641,114	-		Echvi_2213	0.80	+0.5
2,641,212	+				-1.2
2,641,213	-				-0.2
2,641,351	+				+0.7