Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1709

Experiment: m.b. Paraquat dichloride 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Paraquat dichloride 0.25 mg/ml
2,012,479	+				+0.4
2,012,479	+				-1.6
2,012,490	-				-0.5
2,012,490	-				-0.8
2,012,526	-				-0.7
2,012,611	+		Echvi_1708	0.14	-0.6
2,012,627	+		Echvi_1708	0.17	-0.5
2,012,627	+		Echvi_1708	0.17	+0.7
2,012,638	+		Echvi_1708	0.19	-0.0
2,012,704	+		Echvi_1708	0.32	+0.6
2,012,704	+		Echvi_1708	0.32	+0.2
2,012,705	-		Echvi_1708	0.32	-0.3
2,012,792	+		Echvi_1708	0.48	+0.9
2,012,792	+		Echvi_1708	0.48	+0.7
2,012,793	-		Echvi_1708	0.48	+1.2
2,012,793	-		Echvi_1708	0.48	+0.5
2,012,949	+		Echvi_1708	0.76	+0.2
2,012,952	+		Echvi_1708	0.77	-1.1
2,012,977	+		Echvi_1708	0.82	-0.2
2,012,991	+		Echvi_1708	0.84	-0.6
2,012,992	-		Echvi_1708	0.84	+1.4
2,012,992	-		Echvi_1708	0.84	+1.1
2,013,079	+				-0.1
2,013,081	+				+0.3
2,013,113	+				-0.9
2,013,143	+				-0.7
2,013,143	+				+0.3
2,013,190	+				-0.8
2,013,190	+				-0.6
2,013,190	+				+0.3
2,013,191	-				+1.0
2,013,191	-				-0.1
2,013,191	-				-0.4
2,013,191	-				+0.4
2,013,266	-				+0.0
2,013,283	+				-1.1
2,013,325	+				-1.0
2,013,325	+				+0.8
2,013,325	+				-0.9
2,013,326	-				-0.2
2,013,326	-				+0.9
2,013,326	-				+0.2
2,013,335	-				+0.1
2,013,339	+				-1.0
2,013,339	+				-0.8
2,013,339	+				-0.9
2,013,340	-				-0.6
2,013,340	-				-0.5
2,013,340	-				-0.0
2,013,358	-				-0.2
2,013,358	-				+0.2
2,013,432	+				-2.0
2,013,454	+				-1.2
2,013,454	+				+0.5
2,013,455	-				-0.5
2,013,455	-				-0.3
2,013,464	-				-0.3
2,013,632	-		Echvi_1709	0.20	+0.7
2,013,645	-		Echvi_1709	0.21	-1.0
2,013,704	+		Echvi_1709	0.27	-1.9
2,013,705	-		Echvi_1709	0.28	-1.3
2,013,705	-		Echvi_1709	0.28	-2.0
2,013,716	+		Echvi_1709	0.29	-0.8
2,013,716	+		Echvi_1709	0.29	-0.5
2,013,728	+		Echvi_1709	0.30	-0.9
2,013,729	-		Echvi_1709	0.30	-0.8
2,013,730	+		Echvi_1709	0.30	-1.5
2,013,730	+		Echvi_1709	0.30	+0.8
2,013,730	+		Echvi_1709	0.30	-2.0
2,013,731	-		Echvi_1709	0.30	-1.3
2,013,734	-		Echvi_1709	0.31	-1.7
2,013,737	+		Echvi_1709	0.31	+0.1
2,013,738	-		Echvi_1709	0.31	-1.0
2,013,738	-		Echvi_1709	0.31	+2.2
2,013,740	-		Echvi_1709	0.31	+0.1
2,013,740	-		Echvi_1709	0.31	-1.0
2,013,740	-		Echvi_1709	0.31	-0.5
2,013,816	-		Echvi_1709	0.40	-2.0
2,013,842	+		Echvi_1709	0.43	-1.0
2,013,950	-		Echvi_1709	0.54	-0.7
2,013,950	-		Echvi_1709	0.54	+0.6
2,013,950	-		Echvi_1709	0.54	-1.2
2,013,950	-		Echvi_1709	0.54	+1.0
2,013,956	+		Echvi_1709	0.55	-0.6
2,013,957	-		Echvi_1709	0.55	+0.1
2,013,957	-		Echvi_1709	0.55	-0.7
2,013,958	+		Echvi_1709	0.55	-0.7
2,014,000	+		Echvi_1709	0.60	-1.4
2,014,001	-		Echvi_1709	0.60	-0.7
2,014,031	-		Echvi_1709	0.63	-0.2
2,014,119	-		Echvi_1709	0.73	-0.4
2,014,179	-		Echvi_1709	0.79	-1.0
2,014,191	-		Echvi_1709	0.81	+0.1
2,014,249	+		Echvi_1709	0.87	-0.6
2,014,349	+				-0.0
2,014,359	-				-1.1
2,014,359	-				-0.7
2,014,359	-				-0.6
2,014,387	-				-0.2
2,014,392	-				+0.2
2,014,443	-				+1.2
2,014,443	-				+2.1
2,014,465	-				+1.0
2,014,465	-				-0.2
2,014,496	+				+0.1
2,014,497	-				-0.0
2,014,499	-				+1.1
2,014,499	-				+1.0
2,014,518	+				-0.1
2,014,526	+				+0.0
2,014,527	-				+1.2
2,014,535	+				-1.6
2,014,548	+				-0.3
2,014,610	+		Echvi_1710	0.14	+0.8
2,014,694	+		Echvi_1710	0.54	+0.2
2,014,694	+		Echvi_1710	0.54	-0.6
2,014,694	+		Echvi_1710	0.54	+1.9
2,014,695	-		Echvi_1710	0.55	+0.9
2,014,695	-		Echvi_1710	0.55	-1.0
2,014,695	-		Echvi_1710	0.55	+0.8
2,014,714	-		Echvi_1710	0.64	+0.7
2,014,714	-		Echvi_1710	0.64	-0.2
2,014,724	-		Echvi_1710	0.69	-0.3
2,014,724	-		Echvi_1710	0.69	+1.2
2,014,737	+		Echvi_1710	0.75	-1.0
2,014,738	-		Echvi_1710	0.75	+0.7
2,014,738	-		Echvi_1710	0.75	+0.3
2,014,739	+		Echvi_1710	0.76	-0.0
2,014,740	-		Echvi_1710	0.76	+0.3
2,014,741	+		Echvi_1710	0.77	+0.1
2,014,741	+		Echvi_1710	0.77	+0.1
2,014,741	+		Echvi_1710	0.77	+0.1
2,014,741	+		Echvi_1710	0.77	+0.0
2,014,742	-		Echvi_1710	0.77	+1.0
2,014,742	-		Echvi_1710	0.77	+0.8
2,014,783	-				+0.7
2,014,783	-				-0.4
2,014,919	+				-1.0
2,014,930	+				-0.4
2,014,930	+				-0.5
2,014,931	-				-0.6
2,014,959	+				+0.3
2,014,969	-				+0.5
2,015,028	+		Echvi_1711	0.15	+1.0
2,015,028	+		Echvi_1711	0.15	-0.6
2,015,029	-		Echvi_1711	0.15	+0.2
2,015,033	+		Echvi_1711	0.15	+0.7
2,015,034	-		Echvi_1711	0.15	-0.8
2,015,044	+		Echvi_1711	0.16	-0.9
2,015,044	+		Echvi_1711	0.16	-0.6
2,015,044	+		Echvi_1711	0.16	+0.3
2,015,044	+		Echvi_1711	0.16	+0.8
2,015,044	+		Echvi_1711	0.16	+0.4
2,015,046	+		Echvi_1711	0.17	+0.0
2,015,046	+		Echvi_1711	0.17	-0.5
2,015,046	+		Echvi_1711	0.17	+0.5
2,015,046	+		Echvi_1711	0.17	-0.4
2,015,047	-		Echvi_1711	0.17	+2.0
2,015,052	-		Echvi_1711	0.17	+0.1
2,015,052	-		Echvi_1711	0.17	+0.7
2,015,052	-		Echvi_1711	0.17	+0.0
2,015,083	+		Echvi_1711	0.20	-0.6
2,015,084	-		Echvi_1711	0.20	+0.5
2,015,087	+		Echvi_1711	0.21	+1.0
2,015,087	+		Echvi_1711	0.21	-0.6
2,015,088	-		Echvi_1711	0.21	+0.7
2,015,088	-		Echvi_1711	0.21	+0.2
2,015,088	-		Echvi_1711	0.21	-0.6
2,015,089	+		Echvi_1711	0.21	-0.2
2,015,089	+		Echvi_1711	0.21	-0.1
2,015,090	-		Echvi_1711	0.21	+1.1
2,015,090	-		Echvi_1711	0.21	+0.1
2,015,106	-		Echvi_1711	0.22	+1.4
2,015,110	+		Echvi_1711	0.23	-0.8
2,015,110	+		Echvi_1711	0.23	+1.8
2,015,110	+		Echvi_1711	0.23	-0.5
2,015,111	-		Echvi_1711	0.23	-1.8
2,015,153	+		Echvi_1711	0.27	+0.3
2,015,206	+		Echvi_1711	0.32	-0.7
2,015,207	-		Echvi_1711	0.32	+0.1
2,015,207	-		Echvi_1711	0.32	-1.8
2,015,207	-		Echvi_1711	0.32	+0.4
2,015,211	+		Echvi_1711	0.32	+0.1
2,015,233	-		Echvi_1711	0.35	-0.4
2,015,256	+		Echvi_1711	0.37	+0.7
2,015,257	-		Echvi_1711	0.37	-1.0
2,015,259	+		Echvi_1711	0.37	-1.2
2,015,259	+		Echvi_1711	0.37	+0.8
2,015,279	+		Echvi_1711	0.39	+0.2