Experiment: m.b. Paraquat dichloride 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0921 and Echvi_0922 overlap by 1 nucleotides Echvi_0922 and Echvi_0923 overlap by 23 nucleotides
Echvi_0921: Echvi_0921 - Dienelactone hydrolase and related enzymes, at 1,054,219 to 1,055,742
_0921
Echvi_0922: Echvi_0922 - Uncharacterized protein conserved in bacteria, at 1,055,742 to 1,056,917
_0922
Echvi_0923: Echvi_0923 - 4-hydroxythreonine-4-phosphate dehydrogenase, at 1,056,895 to 1,057,947
_0923
Position (kb)
1055
1056
1057 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1054.808 kb on + strand, within Echvi_0921 at 1054.858 kb on + strand, within Echvi_0921 at 1055.019 kb on + strand, within Echvi_0921 at 1055.019 kb on + strand, within Echvi_0921 at 1055.019 kb on + strand, within Echvi_0921 at 1055.020 kb on - strand, within Echvi_0921 at 1055.020 kb on - strand, within Echvi_0921 at 1055.112 kb on - strand, within Echvi_0921 at 1055.139 kb on + strand, within Echvi_0921 at 1055.139 kb on + strand, within Echvi_0921 at 1055.140 kb on - strand, within Echvi_0921 at 1055.191 kb on + strand, within Echvi_0921 at 1055.192 kb on - strand, within Echvi_0921 at 1055.261 kb on + strand, within Echvi_0921 at 1055.303 kb on + strand, within Echvi_0921 at 1055.304 kb on - strand, within Echvi_0921 at 1055.324 kb on + strand, within Echvi_0921 at 1055.324 kb on + strand, within Echvi_0921 at 1055.348 kb on + strand, within Echvi_0921 at 1055.348 kb on + strand, within Echvi_0921 at 1055.348 kb on + strand, within Echvi_0921 at 1055.348 kb on + strand, within Echvi_0921 at 1055.348 kb on + strand, within Echvi_0921 at 1055.349 kb on - strand, within Echvi_0921 at 1055.349 kb on - strand, within Echvi_0921 at 1055.349 kb on - strand, within Echvi_0921 at 1055.352 kb on + strand, within Echvi_0921 at 1055.352 kb on + strand, within Echvi_0921 at 1055.352 kb on + strand, within Echvi_0921 at 1055.352 kb on + strand, within Echvi_0921 at 1055.352 kb on + strand, within Echvi_0921 at 1055.353 kb on - strand, within Echvi_0921 at 1055.371 kb on + strand, within Echvi_0921 at 1055.372 kb on - strand, within Echvi_0921 at 1055.437 kb on - strand, within Echvi_0921 at 1055.546 kb on + strand, within Echvi_0921 at 1055.547 kb on - strand, within Echvi_0921 at 1055.547 kb on - strand, within Echvi_0921 at 1055.668 kb on + strand at 1055.770 kb on + strand at 1055.771 kb on - strand at 1055.776 kb on + strand at 1055.798 kb on - strand at 1055.798 kb on - strand at 1055.798 kb on - strand at 1055.821 kb on - strand at 1055.850 kb on + strand at 1055.850 kb on + strand at 1055.851 kb on - strand at 1055.853 kb on + strand at 1055.853 kb on + strand at 1056.046 kb on + strand, within Echvi_0922 at 1056.124 kb on + strand, within Echvi_0922 at 1056.215 kb on + strand, within Echvi_0922 at 1056.215 kb on + strand, within Echvi_0922 at 1056.215 kb on + strand, within Echvi_0922 at 1056.370 kb on + strand, within Echvi_0922 at 1056.371 kb on - strand, within Echvi_0922 at 1056.405 kb on - strand, within Echvi_0922 at 1056.405 kb on - strand, within Echvi_0922 at 1056.445 kb on + strand, within Echvi_0922 at 1056.456 kb on + strand, within Echvi_0922 at 1056.483 kb on + strand, within Echvi_0922 at 1056.509 kb on + strand, within Echvi_0922 at 1056.556 kb on + strand, within Echvi_0922 at 1056.557 kb on - strand, within Echvi_0922 at 1056.557 kb on - strand, within Echvi_0922 at 1056.557 kb on - strand, within Echvi_0922 at 1056.559 kb on + strand, within Echvi_0922 at 1056.559 kb on + strand, within Echvi_0922 at 1056.560 kb on - strand, within Echvi_0922 at 1056.560 kb on - strand, within Echvi_0922 at 1056.589 kb on + strand, within Echvi_0922 at 1056.590 kb on - strand, within Echvi_0922 at 1056.623 kb on + strand, within Echvi_0922 at 1056.649 kb on - strand, within Echvi_0922 at 1056.864 kb on + strand at 1056.865 kb on - strand at 1056.894 kb on - strand at 1056.903 kb on + strand at 1056.951 kb on - strand at 1056.961 kb on + strand at 1056.962 kb on - strand at 1057.032 kb on + strand, within Echvi_0923 at 1057.056 kb on + strand, within Echvi_0923 at 1057.056 kb on + strand, within Echvi_0923 at 1057.057 kb on - strand, within Echvi_0923 at 1057.057 kb on - strand, within Echvi_0923 at 1057.057 kb on - strand, within Echvi_0923 at 1057.057 kb on - strand, within Echvi_0923 at 1057.073 kb on - strand, within Echvi_0923 at 1057.098 kb on + strand, within Echvi_0923 at 1057.098 kb on + strand, within Echvi_0923 at 1057.098 kb on + strand, within Echvi_0923 at 1057.123 kb on - strand, within Echvi_0923 at 1057.131 kb on + strand, within Echvi_0923 at 1057.131 kb on + strand, within Echvi_0923 at 1057.148 kb on + strand, within Echvi_0923 at 1057.148 kb on + strand, within Echvi_0923 at 1057.148 kb on + strand, within Echvi_0923 at 1057.148 kb on + strand, within Echvi_0923 at 1057.148 kb on + strand, within Echvi_0923 at 1057.149 kb on - strand, within Echvi_0923 at 1057.169 kb on + strand, within Echvi_0923 at 1057.169 kb on + strand, within Echvi_0923 at 1057.169 kb on + strand, within Echvi_0923 at 1057.170 kb on - strand at 1057.181 kb on - strand, within Echvi_0923 at 1057.181 kb on - strand, within Echvi_0923 at 1057.210 kb on + strand, within Echvi_0923 at 1057.210 kb on + strand, within Echvi_0923 at 1057.253 kb on - strand, within Echvi_0923 at 1057.262 kb on - strand, within Echvi_0923 at 1057.318 kb on - strand, within Echvi_0923 at 1057.520 kb on + strand, within Echvi_0923 at 1057.520 kb on + strand, within Echvi_0923 at 1057.521 kb on - strand, within Echvi_0923 at 1057.522 kb on + strand, within Echvi_0923 at 1057.541 kb on + strand, within Echvi_0923 at 1057.542 kb on - strand, within Echvi_0923 at 1057.542 kb on - strand, within Echvi_0923 at 1057.600 kb on + strand, within Echvi_0923 at 1057.600 kb on + strand, within Echvi_0923 at 1057.600 kb on + strand, within Echvi_0923 at 1057.600 kb on + strand, within Echvi_0923 at 1057.601 kb on - strand, within Echvi_0923 at 1057.626 kb on + strand, within Echvi_0923 at 1057.627 kb on - strand, within Echvi_0923 at 1057.720 kb on + strand, within Echvi_0923 at 1057.720 kb on + strand, within Echvi_0923 at 1057.720 kb on + strand, within Echvi_0923 at 1057.720 kb on + strand, within Echvi_0923 at 1057.726 kb on + strand, within Echvi_0923 at 1057.814 kb on - strand, within Echvi_0923 at 1057.835 kb on - strand, within Echvi_0923 at 1057.888 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.25 mg/ml remove 1,054,808 + Echvi_0921 0.39 -0.3 1,054,858 + Echvi_0921 0.42 -0.4 1,055,019 + Echvi_0921 0.52 -0.1 1,055,019 + Echvi_0921 0.52 -0.3 1,055,019 + Echvi_0921 0.52 -0.2 1,055,020 - Echvi_0921 0.53 -0.5 1,055,020 - Echvi_0921 0.53 +0.4 1,055,112 - Echvi_0921 0.59 -0.0 1,055,139 + Echvi_0921 0.60 +0.4 1,055,139 + Echvi_0921 0.60 -0.2 1,055,140 - Echvi_0921 0.60 -0.7 1,055,191 + Echvi_0921 0.64 +0.4 1,055,192 - Echvi_0921 0.64 -1.2 1,055,261 + Echvi_0921 0.68 -0.0 1,055,303 + Echvi_0921 0.71 +0.6 1,055,304 - Echvi_0921 0.71 -0.1 1,055,324 + Echvi_0921 0.73 +0.2 1,055,324 + Echvi_0921 0.73 -0.3 1,055,348 + Echvi_0921 0.74 -0.0 1,055,348 + Echvi_0921 0.74 +0.3 1,055,348 + Echvi_0921 0.74 -0.0 1,055,348 + Echvi_0921 0.74 +0.6 1,055,348 + Echvi_0921 0.74 -0.1 1,055,349 - Echvi_0921 0.74 -0.2 1,055,349 - Echvi_0921 0.74 +0.1 1,055,349 - Echvi_0921 0.74 -0.2 1,055,352 + Echvi_0921 0.74 +0.6 1,055,352 + Echvi_0921 0.74 +0.1 1,055,352 + Echvi_0921 0.74 +0.0 1,055,352 + Echvi_0921 0.74 +0.5 1,055,352 + Echvi_0921 0.74 +0.1 1,055,353 - Echvi_0921 0.74 -1.7 1,055,371 + Echvi_0921 0.76 +0.3 1,055,372 - Echvi_0921 0.76 -0.2 1,055,437 - Echvi_0921 0.80 +0.6 1,055,546 + Echvi_0921 0.87 -2.6 1,055,547 - Echvi_0921 0.87 -0.3 1,055,547 - Echvi_0921 0.87 +0.1 1,055,668 + +0.4 1,055,770 + +0.2 1,055,771 - -1.2 1,055,776 + -0.4 1,055,798 - -0.3 1,055,798 - -0.7 1,055,798 - -0.3 1,055,821 - +0.6 1,055,850 + +0.2 1,055,850 + -0.0 1,055,851 - +0.0 1,055,853 + +2.2 1,055,853 + +0.1 1,056,046 + Echvi_0922 0.26 +1.4 1,056,124 + Echvi_0922 0.32 +0.8 1,056,215 + Echvi_0922 0.40 +0.5 1,056,215 + Echvi_0922 0.40 +1.0 1,056,215 + Echvi_0922 0.40 -0.3 1,056,370 + Echvi_0922 0.53 +0.8 1,056,371 - Echvi_0922 0.53 +0.6 1,056,405 - Echvi_0922 0.56 -0.9 1,056,405 - Echvi_0922 0.56 +0.3 1,056,445 + Echvi_0922 0.60 +1.3 1,056,456 + Echvi_0922 0.61 -0.6 1,056,483 + Echvi_0922 0.63 +0.2 1,056,509 + Echvi_0922 0.65 +1.0 1,056,556 + Echvi_0922 0.69 -0.5 1,056,557 - Echvi_0922 0.69 +0.2 1,056,557 - Echvi_0922 0.69 +0.2 1,056,557 - Echvi_0922 0.69 +0.5 1,056,559 + Echvi_0922 0.69 +0.7 1,056,559 + Echvi_0922 0.69 +0.0 1,056,560 - Echvi_0922 0.70 +1.3 1,056,560 - Echvi_0922 0.70 +1.6 1,056,589 + Echvi_0922 0.72 -0.7 1,056,590 - Echvi_0922 0.72 -1.3 1,056,623 + Echvi_0922 0.75 +0.5 1,056,649 - Echvi_0922 0.77 +0.8 1,056,864 + -1.8 1,056,865 - -0.1 1,056,894 - -0.4 1,056,903 + +1.5 1,056,951 - -0.8 1,056,961 + +0.6 1,056,962 - +0.4 1,057,032 + Echvi_0923 0.13 +0.1 1,057,056 + Echvi_0923 0.15 -1.2 1,057,056 + Echvi_0923 0.15 +0.4 1,057,057 - Echvi_0923 0.15 -0.7 1,057,057 - Echvi_0923 0.15 +0.5 1,057,057 - Echvi_0923 0.15 -0.2 1,057,057 - Echvi_0923 0.15 +0.4 1,057,073 - Echvi_0923 0.17 -0.4 1,057,098 + Echvi_0923 0.19 +0.4 1,057,098 + Echvi_0923 0.19 -0.5 1,057,098 + Echvi_0923 0.19 -1.9 1,057,123 - Echvi_0923 0.22 -0.6 1,057,131 + Echvi_0923 0.22 +2.0 1,057,131 + Echvi_0923 0.22 +1.2 1,057,148 + Echvi_0923 0.24 -0.8 1,057,148 + Echvi_0923 0.24 +0.6 1,057,148 + Echvi_0923 0.24 -0.7 1,057,148 + Echvi_0923 0.24 +0.6 1,057,148 + Echvi_0923 0.24 -0.3 1,057,149 - Echvi_0923 0.24 -1.0 1,057,169 + Echvi_0923 0.26 -0.5 1,057,169 + Echvi_0923 0.26 +0.8 1,057,169 + Echvi_0923 0.26 +0.8 1,057,170 - +1.0 1,057,181 - Echvi_0923 0.27 -1.7 1,057,181 - Echvi_0923 0.27 -1.7 1,057,210 + Echvi_0923 0.30 +1.6 1,057,210 + Echvi_0923 0.30 +0.4 1,057,253 - Echvi_0923 0.34 -0.4 1,057,262 - Echvi_0923 0.35 +0.0 1,057,318 - Echvi_0923 0.40 +1.2 1,057,520 + Echvi_0923 0.59 +0.0 1,057,520 + Echvi_0923 0.59 +0.6 1,057,521 - Echvi_0923 0.59 +0.9 1,057,522 + Echvi_0923 0.60 -0.4 1,057,541 + Echvi_0923 0.61 +0.0 1,057,542 - Echvi_0923 0.61 -0.1 1,057,542 - Echvi_0923 0.61 -0.0 1,057,600 + Echvi_0923 0.67 -2.4 1,057,600 + Echvi_0923 0.67 -0.5 1,057,600 + Echvi_0923 0.67 +0.5 1,057,600 + Echvi_0923 0.67 +0.4 1,057,601 - Echvi_0923 0.67 -0.4 1,057,626 + Echvi_0923 0.69 +0.7 1,057,627 - Echvi_0923 0.70 -0.1 1,057,720 + Echvi_0923 0.78 +0.2 1,057,720 + Echvi_0923 0.78 +0.4 1,057,720 + Echvi_0923 0.78 +0.3 1,057,720 + Echvi_0923 0.78 -1.0 1,057,726 + Echvi_0923 0.79 +0.7 1,057,814 - Echvi_0923 0.87 -2.1 1,057,835 - Echvi_0923 0.89 +0.7 1,057,888 - +0.6
Or see this region's nucleotide sequence