Experiment: m.b. Paraquat dichloride 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0791 and Echvi_0792 are separated by 121 nucleotides Echvi_0792 and Echvi_0793 are separated by 277 nucleotides
Echvi_0791: Echvi_0791 - Zn-dependent dipeptidase, microsomal dipeptidase homolog, at 902,365 to 903,618
_0791
Echvi_0792: Echvi_0792 - Aminopeptidase N, at 903,740 to 905,365
_0792
Echvi_0793: Echvi_0793 - hypothetical protein, at 905,643 to 907,007
_0793
Position (kb) 903
904
905
906 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 902.780 kb on - strand, within Echvi_0791 at 902.874 kb on + strand, within Echvi_0791 at 902.879 kb on + strand, within Echvi_0791 at 902.880 kb on - strand, within Echvi_0791 at 902.880 kb on - strand, within Echvi_0791 at 902.880 kb on - strand, within Echvi_0791 at 902.880 kb on - strand, within Echvi_0791 at 902.884 kb on + strand, within Echvi_0791 at 902.884 kb on + strand, within Echvi_0791 at 902.885 kb on - strand, within Echvi_0791 at 902.908 kb on + strand, within Echvi_0791 at 902.908 kb on + strand, within Echvi_0791 at 902.908 kb on + strand, within Echvi_0791 at 902.911 kb on - strand, within Echvi_0791 at 902.988 kb on + strand, within Echvi_0791 at 902.989 kb on - strand, within Echvi_0791 at 903.071 kb on - strand, within Echvi_0791 at 903.087 kb on + strand, within Echvi_0791 at 903.088 kb on - strand, within Echvi_0791 at 903.131 kb on - strand, within Echvi_0791 at 903.131 kb on - strand, within Echvi_0791 at 903.132 kb on + strand, within Echvi_0791 at 903.133 kb on - strand, within Echvi_0791 at 903.133 kb on - strand, within Echvi_0791 at 903.154 kb on - strand, within Echvi_0791 at 903.219 kb on + strand, within Echvi_0791 at 903.219 kb on + strand, within Echvi_0791 at 903.239 kb on - strand, within Echvi_0791 at 903.239 kb on - strand, within Echvi_0791 at 903.241 kb on - strand, within Echvi_0791 at 903.241 kb on - strand, within Echvi_0791 at 903.241 kb on - strand, within Echvi_0791 at 903.300 kb on - strand, within Echvi_0791 at 903.300 kb on - strand, within Echvi_0791 at 903.300 kb on - strand, within Echvi_0791 at 903.300 kb on - strand, within Echvi_0791 at 903.328 kb on + strand, within Echvi_0791 at 903.329 kb on - strand, within Echvi_0791 at 903.329 kb on - strand, within Echvi_0791 at 903.480 kb on + strand, within Echvi_0791 at 903.496 kb on + strand at 903.496 kb on + strand at 903.501 kb on + strand at 903.502 kb on - strand at 903.502 kb on - strand at 903.533 kb on - strand at 903.565 kb on - strand at 903.665 kb on + strand at 903.689 kb on + strand at 903.701 kb on + strand at 903.701 kb on + strand at 903.741 kb on + strand at 903.756 kb on + strand at 903.773 kb on + strand at 903.773 kb on + strand at 903.773 kb on + strand at 903.774 kb on - strand at 903.835 kb on + strand at 903.898 kb on - strand at 903.948 kb on + strand, within Echvi_0792 at 903.954 kb on + strand, within Echvi_0792 at 903.954 kb on + strand, within Echvi_0792 at 903.954 kb on + strand, within Echvi_0792 at 903.954 kb on + strand, within Echvi_0792 at 903.954 kb on + strand, within Echvi_0792 at 903.954 kb on + strand, within Echvi_0792 at 903.954 kb on + strand, within Echvi_0792 at 903.954 kb on + strand, within Echvi_0792 at 903.954 kb on + strand, within Echvi_0792 at 903.955 kb on - strand, within Echvi_0792 at 903.955 kb on - strand, within Echvi_0792 at 903.955 kb on - strand, within Echvi_0792 at 903.955 kb on - strand, within Echvi_0792 at 904.038 kb on + strand, within Echvi_0792 at 904.038 kb on + strand, within Echvi_0792 at 904.039 kb on - strand, within Echvi_0792 at 904.042 kb on + strand, within Echvi_0792 at 904.043 kb on - strand, within Echvi_0792 at 904.043 kb on - strand, within Echvi_0792 at 904.043 kb on - strand, within Echvi_0792 at 904.043 kb on - strand, within Echvi_0792 at 904.058 kb on + strand, within Echvi_0792 at 904.058 kb on + strand, within Echvi_0792 at 904.139 kb on - strand, within Echvi_0792 at 904.140 kb on + strand, within Echvi_0792 at 904.155 kb on + strand, within Echvi_0792 at 904.155 kb on + strand, within Echvi_0792 at 904.155 kb on + strand, within Echvi_0792 at 904.156 kb on - strand, within Echvi_0792 at 904.156 kb on - strand, within Echvi_0792 at 904.156 kb on - strand, within Echvi_0792 at 904.269 kb on + strand, within Echvi_0792 at 904.270 kb on - strand, within Echvi_0792 at 904.270 kb on - strand, within Echvi_0792 at 904.272 kb on + strand, within Echvi_0792 at 904.273 kb on - strand, within Echvi_0792 at 904.279 kb on + strand, within Echvi_0792 at 904.279 kb on + strand, within Echvi_0792 at 904.280 kb on - strand, within Echvi_0792 at 904.342 kb on + strand, within Echvi_0792 at 904.343 kb on - strand, within Echvi_0792 at 904.376 kb on + strand, within Echvi_0792 at 904.377 kb on - strand, within Echvi_0792 at 904.403 kb on + strand, within Echvi_0792 at 904.408 kb on + strand, within Echvi_0792 at 904.409 kb on - strand, within Echvi_0792 at 904.413 kb on + strand, within Echvi_0792 at 904.464 kb on + strand, within Echvi_0792 at 904.464 kb on + strand, within Echvi_0792 at 904.464 kb on + strand, within Echvi_0792 at 904.465 kb on - strand, within Echvi_0792 at 904.518 kb on + strand, within Echvi_0792 at 904.518 kb on + strand, within Echvi_0792 at 904.519 kb on - strand, within Echvi_0792 at 904.519 kb on - strand, within Echvi_0792 at 904.519 kb on - strand, within Echvi_0792 at 904.519 kb on - strand, within Echvi_0792 at 904.540 kb on + strand, within Echvi_0792 at 904.540 kb on + strand, within Echvi_0792 at 904.540 kb on + strand, within Echvi_0792 at 904.618 kb on + strand, within Echvi_0792 at 904.626 kb on - strand, within Echvi_0792 at 904.635 kb on + strand, within Echvi_0792 at 904.636 kb on - strand, within Echvi_0792 at 904.684 kb on - strand, within Echvi_0792 at 904.684 kb on - strand, within Echvi_0792 at 904.688 kb on - strand, within Echvi_0792 at 904.719 kb on + strand, within Echvi_0792 at 904.719 kb on + strand, within Echvi_0792 at 904.719 kb on + strand, within Echvi_0792 at 904.725 kb on + strand, within Echvi_0792 at 904.793 kb on + strand, within Echvi_0792 at 904.793 kb on + strand, within Echvi_0792 at 904.793 kb on + strand, within Echvi_0792 at 904.793 kb on + strand, within Echvi_0792 at 904.793 kb on + strand, within Echvi_0792 at 904.794 kb on - strand, within Echvi_0792 at 904.794 kb on - strand, within Echvi_0792 at 904.794 kb on - strand, within Echvi_0792 at 904.794 kb on - strand, within Echvi_0792 at 904.794 kb on - strand, within Echvi_0792 at 904.794 kb on - strand, within Echvi_0792 at 904.794 kb on - strand, within Echvi_0792 at 904.795 kb on + strand, within Echvi_0792 at 904.798 kb on - strand, within Echvi_0792 at 904.849 kb on + strand, within Echvi_0792 at 904.969 kb on + strand, within Echvi_0792 at 904.970 kb on - strand, within Echvi_0792 at 904.971 kb on + strand at 904.971 kb on + strand, within Echvi_0792 at 904.974 kb on + strand, within Echvi_0792 at 904.975 kb on - strand, within Echvi_0792 at 905.007 kb on + strand, within Echvi_0792 at 905.007 kb on + strand, within Echvi_0792 at 905.194 kb on - strand, within Echvi_0792 at 905.194 kb on - strand, within Echvi_0792 at 905.293 kb on + strand at 905.316 kb on + strand at 905.338 kb on + strand at 905.338 kb on + strand at 905.401 kb on - strand at 905.408 kb on + strand at 905.413 kb on - strand at 905.420 kb on - strand at 905.427 kb on + strand at 905.428 kb on - strand at 905.429 kb on + strand at 905.430 kb on - strand at 905.678 kb on - strand at 905.682 kb on + strand at 905.683 kb on - strand at 905.810 kb on + strand, within Echvi_0793 at 905.812 kb on + strand, within Echvi_0793 at 905.812 kb on + strand, within Echvi_0793 at 905.812 kb on + strand, within Echvi_0793 at 905.812 kb on + strand, within Echvi_0793 at 905.813 kb on - strand, within Echvi_0793 at 905.852 kb on + strand, within Echvi_0793 at 905.853 kb on - strand, within Echvi_0793 at 905.864 kb on - strand, within Echvi_0793 at 905.899 kb on - strand, within Echvi_0793 at 905.899 kb on - strand, within Echvi_0793 at 905.899 kb on - strand, within Echvi_0793 at 905.907 kb on + strand, within Echvi_0793 at 905.907 kb on + strand, within Echvi_0793 at 905.908 kb on - strand, within Echvi_0793 at 905.930 kb on - strand, within Echvi_0793 at 905.930 kb on - strand, within Echvi_0793 at 906.057 kb on + strand, within Echvi_0793 at 906.058 kb on - strand, within Echvi_0793 at 906.067 kb on + strand, within Echvi_0793 at 906.068 kb on - strand, within Echvi_0793 at 906.080 kb on + strand, within Echvi_0793 at 906.090 kb on + strand, within Echvi_0793 at 906.090 kb on + strand, within Echvi_0793 at 906.090 kb on + strand, within Echvi_0793 at 906.090 kb on + strand, within Echvi_0793 at 906.090 kb on + strand, within Echvi_0793 at 906.091 kb on - strand, within Echvi_0793 at 906.091 kb on - strand, within Echvi_0793 at 906.092 kb on + strand, within Echvi_0793 at 906.092 kb on + strand, within Echvi_0793 at 906.092 kb on + strand, within Echvi_0793 at 906.138 kb on + strand, within Echvi_0793 at 906.139 kb on - strand, within Echvi_0793 at 906.171 kb on + strand, within Echvi_0793 at 906.172 kb on - strand, within Echvi_0793 at 906.172 kb on - strand, within Echvi_0793 at 906.174 kb on + strand, within Echvi_0793 at 906.175 kb on - strand, within Echvi_0793 at 906.175 kb on - strand, within Echvi_0793 at 906.178 kb on + strand, within Echvi_0793 at 906.303 kb on + strand, within Echvi_0793 at 906.304 kb on - strand, within Echvi_0793 at 906.308 kb on + strand, within Echvi_0793 at 906.324 kb on + strand, within Echvi_0793 at 906.324 kb on + strand, within Echvi_0793 at 906.325 kb on - strand, within Echvi_0793 at 906.339 kb on - strand, within Echvi_0793 at 906.339 kb on - strand, within Echvi_0793 at 906.350 kb on + strand, within Echvi_0793 at 906.351 kb on - strand, within Echvi_0793 at 906.351 kb on - strand, within Echvi_0793
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.25 mg/ml remove 902,780 - Echvi_0791 0.33 +0.5 902,874 + Echvi_0791 0.41 -0.9 902,879 + Echvi_0791 0.41 +0.6 902,880 - Echvi_0791 0.41 +0.1 902,880 - Echvi_0791 0.41 -0.3 902,880 - Echvi_0791 0.41 +0.0 902,880 - Echvi_0791 0.41 +0.0 902,884 + Echvi_0791 0.41 -1.3 902,884 + Echvi_0791 0.41 -2.4 902,885 - Echvi_0791 0.41 +0.5 902,908 + Echvi_0791 0.43 +0.8 902,908 + Echvi_0791 0.43 +1.4 902,908 + Echvi_0791 0.43 +0.8 902,911 - Echvi_0791 0.44 +1.4 902,988 + Echvi_0791 0.50 +1.3 902,989 - Echvi_0791 0.50 +1.1 903,071 - Echvi_0791 0.56 -0.2 903,087 + Echvi_0791 0.58 -1.3 903,088 - Echvi_0791 0.58 +0.3 903,131 - Echvi_0791 0.61 -0.4 903,131 - Echvi_0791 0.61 -0.6 903,132 + Echvi_0791 0.61 +0.2 903,133 - Echvi_0791 0.61 -0.3 903,133 - Echvi_0791 0.61 +0.0 903,154 - Echvi_0791 0.63 -0.7 903,219 + Echvi_0791 0.68 +0.5 903,219 + Echvi_0791 0.68 -0.4 903,239 - Echvi_0791 0.70 +0.4 903,239 - Echvi_0791 0.70 +0.4 903,241 - Echvi_0791 0.70 +0.1 903,241 - Echvi_0791 0.70 +0.3 903,241 - Echvi_0791 0.70 -0.4 903,300 - Echvi_0791 0.75 +0.6 903,300 - Echvi_0791 0.75 +0.6 903,300 - Echvi_0791 0.75 +0.3 903,300 - Echvi_0791 0.75 +0.1 903,328 + Echvi_0791 0.77 -0.1 903,329 - Echvi_0791 0.77 +1.1 903,329 - Echvi_0791 0.77 +0.2 903,480 + Echvi_0791 0.89 +0.2 903,496 + +0.3 903,496 + +0.4 903,501 + -0.9 903,502 - +0.7 903,502 - +0.2 903,533 - -3.0 903,565 - -0.4 903,665 + +0.6 903,689 + +0.6 903,701 + -0.6 903,701 + +1.2 903,741 + -1.5 903,756 + +0.1 903,773 + -1.0 903,773 + -1.5 903,773 + +0.8 903,774 - -0.3 903,835 + -0.7 903,898 - -0.0 903,948 + Echvi_0792 0.13 -0.9 903,954 + Echvi_0792 0.13 +0.9 903,954 + Echvi_0792 0.13 +0.0 903,954 + Echvi_0792 0.13 +0.3 903,954 + Echvi_0792 0.13 -0.8 903,954 + Echvi_0792 0.13 -0.4 903,954 + Echvi_0792 0.13 -1.0 903,954 + Echvi_0792 0.13 -0.2 903,954 + Echvi_0792 0.13 -0.2 903,954 + Echvi_0792 0.13 -0.3 903,955 - Echvi_0792 0.13 -0.8 903,955 - Echvi_0792 0.13 -0.0 903,955 - Echvi_0792 0.13 -1.0 903,955 - Echvi_0792 0.13 +0.2 904,038 + Echvi_0792 0.18 -1.8 904,038 + Echvi_0792 0.18 +0.7 904,039 - Echvi_0792 0.18 -0.4 904,042 + Echvi_0792 0.19 -2.1 904,043 - Echvi_0792 0.19 -0.9 904,043 - Echvi_0792 0.19 +0.0 904,043 - Echvi_0792 0.19 +0.3 904,043 - Echvi_0792 0.19 +0.4 904,058 + Echvi_0792 0.20 -0.6 904,058 + Echvi_0792 0.20 +0.3 904,139 - Echvi_0792 0.25 -0.1 904,140 + Echvi_0792 0.25 +0.3 904,155 + Echvi_0792 0.26 -1.3 904,155 + Echvi_0792 0.26 +0.1 904,155 + Echvi_0792 0.26 +0.1 904,156 - Echvi_0792 0.26 -0.6 904,156 - Echvi_0792 0.26 +0.3 904,156 - Echvi_0792 0.26 -0.0 904,269 + Echvi_0792 0.33 -1.1 904,270 - Echvi_0792 0.33 +1.2 904,270 - Echvi_0792 0.33 +1.3 904,272 + Echvi_0792 0.33 -1.6 904,273 - Echvi_0792 0.33 +0.4 904,279 + Echvi_0792 0.33 -0.2 904,279 + Echvi_0792 0.33 +3.2 904,280 - Echvi_0792 0.33 -0.8 904,342 + Echvi_0792 0.37 -0.7 904,343 - Echvi_0792 0.37 -0.7 904,376 + Echvi_0792 0.39 +0.9 904,377 - Echvi_0792 0.39 +0.5 904,403 + Echvi_0792 0.41 -0.7 904,408 + Echvi_0792 0.41 -0.9 904,409 - Echvi_0792 0.41 -0.4 904,413 + Echvi_0792 0.41 +0.1 904,464 + Echvi_0792 0.45 +0.1 904,464 + Echvi_0792 0.45 -1.0 904,464 + Echvi_0792 0.45 -2.0 904,465 - Echvi_0792 0.45 -0.1 904,518 + Echvi_0792 0.48 -0.6 904,518 + Echvi_0792 0.48 +0.3 904,519 - Echvi_0792 0.48 -0.4 904,519 - Echvi_0792 0.48 -1.4 904,519 - Echvi_0792 0.48 +0.7 904,519 - Echvi_0792 0.48 +0.7 904,540 + Echvi_0792 0.49 +0.2 904,540 + Echvi_0792 0.49 -1.7 904,540 + Echvi_0792 0.49 -0.0 904,618 + Echvi_0792 0.54 -0.7 904,626 - Echvi_0792 0.54 -0.5 904,635 + Echvi_0792 0.55 -1.8 904,636 - Echvi_0792 0.55 -0.1 904,684 - Echvi_0792 0.58 -0.3 904,684 - Echvi_0792 0.58 -0.3 904,688 - Echvi_0792 0.58 +0.7 904,719 + Echvi_0792 0.60 -2.2 904,719 + Echvi_0792 0.60 -0.2 904,719 + Echvi_0792 0.60 +1.2 904,725 + Echvi_0792 0.61 -1.3 904,793 + Echvi_0792 0.65 -1.2 904,793 + Echvi_0792 0.65 +1.6 904,793 + Echvi_0792 0.65 +1.1 904,793 + Echvi_0792 0.65 +0.1 904,793 + Echvi_0792 0.65 -0.1 904,794 - Echvi_0792 0.65 +0.1 904,794 - Echvi_0792 0.65 -0.4 904,794 - Echvi_0792 0.65 -0.3 904,794 - Echvi_0792 0.65 +2.3 904,794 - Echvi_0792 0.65 +0.2 904,794 - Echvi_0792 0.65 +1.0 904,794 - Echvi_0792 0.65 +0.1 904,795 + Echvi_0792 0.65 -0.8 904,798 - Echvi_0792 0.65 -1.7 904,849 + Echvi_0792 0.68 -1.5 904,969 + Echvi_0792 0.76 -2.1 904,970 - Echvi_0792 0.76 +0.7 904,971 + +1.6 904,971 + Echvi_0792 0.76 +0.0 904,974 + Echvi_0792 0.76 -2.2 904,975 - Echvi_0792 0.76 +1.2 905,007 + Echvi_0792 0.78 -2.3 905,007 + Echvi_0792 0.78 -0.0 905,194 - Echvi_0792 0.89 -0.6 905,194 - Echvi_0792 0.89 +0.1 905,293 + -1.5 905,316 + -0.8 905,338 + -1.6 905,338 + -1.1 905,401 - -1.5 905,408 + -0.8 905,413 - -0.0 905,420 - -0.6 905,427 + -1.2 905,428 - +0.7 905,429 + -2.7 905,430 - -0.3 905,678 - -0.4 905,682 + -0.8 905,683 - +0.6 905,810 + Echvi_0793 0.12 -0.3 905,812 + Echvi_0793 0.12 -1.5 905,812 + Echvi_0793 0.12 -1.1 905,812 + Echvi_0793 0.12 -1.5 905,812 + Echvi_0793 0.12 -1.4 905,813 - Echvi_0793 0.12 -0.4 905,852 + Echvi_0793 0.15 -0.9 905,853 - Echvi_0793 0.15 +0.7 905,864 - Echvi_0793 0.16 +0.2 905,899 - Echvi_0793 0.19 -0.4 905,899 - Echvi_0793 0.19 +0.4 905,899 - Echvi_0793 0.19 -0.2 905,907 + Echvi_0793 0.19 +0.2 905,907 + Echvi_0793 0.19 -0.5 905,908 - Echvi_0793 0.19 +1.0 905,930 - Echvi_0793 0.21 -0.5 905,930 - Echvi_0793 0.21 -0.6 906,057 + Echvi_0793 0.30 -0.9 906,058 - Echvi_0793 0.30 +1.1 906,067 + Echvi_0793 0.31 -1.2 906,068 - Echvi_0793 0.31 +1.4 906,080 + Echvi_0793 0.32 -2.7 906,090 + Echvi_0793 0.33 -0.3 906,090 + Echvi_0793 0.33 -1.6 906,090 + Echvi_0793 0.33 -1.5 906,090 + Echvi_0793 0.33 -0.0 906,090 + Echvi_0793 0.33 -0.5 906,091 - Echvi_0793 0.33 +0.7 906,091 - Echvi_0793 0.33 +0.6 906,092 + Echvi_0793 0.33 -1.4 906,092 + Echvi_0793 0.33 -2.1 906,092 + Echvi_0793 0.33 -0.5 906,138 + Echvi_0793 0.36 -1.4 906,139 - Echvi_0793 0.36 -0.8 906,171 + Echvi_0793 0.39 -1.0 906,172 - Echvi_0793 0.39 +0.8 906,172 - Echvi_0793 0.39 +0.4 906,174 + Echvi_0793 0.39 -1.0 906,175 - Echvi_0793 0.39 +2.9 906,175 - Echvi_0793 0.39 -0.6 906,178 + Echvi_0793 0.39 +1.6 906,303 + Echvi_0793 0.48 -0.9 906,304 - Echvi_0793 0.48 -0.9 906,308 + Echvi_0793 0.49 -0.8 906,324 + Echvi_0793 0.50 -0.2 906,324 + Echvi_0793 0.50 -2.6 906,325 - Echvi_0793 0.50 +0.6 906,339 - Echvi_0793 0.51 +1.6 906,339 - Echvi_0793 0.51 +0.2 906,350 + Echvi_0793 0.52 +0.3 906,351 - Echvi_0793 0.52 +1.2 906,351 - Echvi_0793 0.52 +0.6
Or see this region's nucleotide sequence