Experiment: M9 with casaminos and trichloroethylene 76.3 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0769 and EX28DRAFT_0770 are separated by 107 nucleotides EX28DRAFT_0770 and EX28DRAFT_0771 are separated by 37 nucleotides EX28DRAFT_0771 and EX28DRAFT_0772 are separated by 208 nucleotides
EX28DRAFT_0769: EX28DRAFT_0769 - Uncharacterized proteins, homologs of microcin C7 resistance protein MccF, at 766,896 to 767,810
_0769
EX28DRAFT_0770: EX28DRAFT_0770 - Transglycosylase SLT domain, at 767,918 to 768,529
_0770
EX28DRAFT_0771: EX28DRAFT_0771 - Predicted glycosyltransferase, at 768,567 to 769,298
_0771
EX28DRAFT_0772: EX28DRAFT_0772 - Predicted membrane protein, at 769,507 to 769,761
_0772
Position (kb) 767
768
769 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 767.172 kb on + strand, within EX28DRAFT_0769 at 767.173 kb on - strand, within EX28DRAFT_0769 at 767.836 kb on + strand at 767.837 kb on - strand at 767.844 kb on + strand at 767.844 kb on + strand at 767.844 kb on + strand at 767.844 kb on + strand at 767.845 kb on - strand at 767.858 kb on + strand at 767.860 kb on + strand at 767.861 kb on - strand at 767.861 kb on - strand at 767.861 kb on - strand at 767.904 kb on + strand at 767.910 kb on + strand at 767.910 kb on + strand at 767.911 kb on - strand at 767.911 kb on - strand at 768.200 kb on + strand, within EX28DRAFT_0770 at 768.200 kb on + strand, within EX28DRAFT_0770 at 768.286 kb on + strand, within EX28DRAFT_0770 at 768.336 kb on - strand, within EX28DRAFT_0770 at 768.491 kb on + strand at 768.493 kb on + strand at 768.494 kb on - strand at 768.528 kb on - strand at 768.528 kb on - strand at 768.528 kb on - strand at 768.528 kb on - strand at 768.614 kb on - strand at 768.618 kb on - strand at 768.751 kb on + strand, within EX28DRAFT_0771 at 768.952 kb on + strand, within EX28DRAFT_0771 at 768.953 kb on - strand, within EX28DRAFT_0771 at 769.053 kb on + strand, within EX28DRAFT_0771 at 769.120 kb on + strand, within EX28DRAFT_0771 at 769.248 kb on + strand at 769.248 kb on + strand at 769.248 kb on + strand at 769.249 kb on - strand at 769.251 kb on + strand at 769.251 kb on + strand at 769.316 kb on + strand at 769.316 kb on + strand at 769.316 kb on + strand at 769.317 kb on - strand at 769.394 kb on + strand at 769.448 kb on + strand at 769.448 kb on + strand at 769.448 kb on + strand at 769.449 kb on - strand at 769.513 kb on - strand at 769.527 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with casaminos and trichloroethylene 76.3 uM remove 767,172 + EX28DRAFT_0769 0.30 -3.6 767,173 - EX28DRAFT_0769 0.30 -2.6 767,836 + +0.0 767,837 - +0.2 767,844 + -0.4 767,844 + -0.0 767,844 + +0.6 767,844 + -0.2 767,845 - +0.7 767,858 + -0.3 767,860 + +1.8 767,861 - +0.1 767,861 - +1.4 767,861 - -0.1 767,904 + -0.5 767,910 + -0.5 767,910 + -0.3 767,911 - -0.1 767,911 - +0.9 768,200 + EX28DRAFT_0770 0.46 -2.6 768,200 + EX28DRAFT_0770 0.46 -1.1 768,286 + EX28DRAFT_0770 0.60 +0.2 768,336 - EX28DRAFT_0770 0.68 -2.2 768,491 + -1.0 768,493 + +0.2 768,494 - +0.3 768,528 - -0.3 768,528 - +0.0 768,528 - +0.2 768,528 - +0.0 768,614 - +0.5 768,618 - -2.3 768,751 + EX28DRAFT_0771 0.25 -0.6 768,952 + EX28DRAFT_0771 0.53 +0.2 768,953 - EX28DRAFT_0771 0.53 +1.4 769,053 + EX28DRAFT_0771 0.66 -0.4 769,120 + EX28DRAFT_0771 0.76 -0.3 769,248 + +0.6 769,248 + -0.4 769,248 + +0.0 769,249 - +0.7 769,251 + -0.6 769,251 + -0.2 769,316 + +0.4 769,316 + -0.3 769,316 + +0.4 769,317 - -0.2 769,394 + -0.1 769,448 + +0.0 769,448 + -0.0 769,448 + +0.3 769,449 - +0.4 769,513 - +0.0 769,527 + -0.6
Or see this region's nucleotide sequence