Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_21470

Experiment: m.b. Thallium(I) acetate 0.0025 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_21460 and CA264_21465 are separated by 148 nucleotidesCA264_21465 and CA264_21470 are separated by 110 nucleotidesCA264_21470 and CA264_21475 are separated by 910 nucleotides CA264_21460: CA264_21460 - hypothetical protein, at 158,939 to 160,138 _21460 CA264_21465: CA264_21465 - hypothetical protein, at 160,287 to 160,754 _21465 CA264_21470: CA264_21470 - hypothetical protein, at 160,865 to 161,497 _21470 CA264_21475: CA264_21475 - hypothetical protein, at 162,408 to 162,995 _21475 Position (kb) 160 161 162Strain fitness (log2 ratio) -2 -1 0 1 2at 160.021 kb on - strandat 160.021 kb on - strandat 160.063 kb on - strandat 160.273 kb on - strandat 160.273 kb on - strandat 160.306 kb on - strandat 160.308 kb on - strandat 160.367 kb on - strand, within CA264_21465at 160.503 kb on - strand, within CA264_21465at 160.619 kb on - strand, within CA264_21465at 160.709 kb on - strandat 160.908 kb on + strandat 160.965 kb on + strand, within CA264_21470at 160.966 kb on - strand, within CA264_21470at 161.085 kb on + strand, within CA264_21470at 161.086 kb on - strand, within CA264_21470at 161.086 kb on - strand, within CA264_21470at 161.086 kb on - strand, within CA264_21470at 161.093 kb on + strand, within CA264_21470at 161.093 kb on + strand, within CA264_21470at 161.176 kb on + strand, within CA264_21470at 161.182 kb on - strand, within CA264_21470at 161.187 kb on + strand, within CA264_21470at 161.188 kb on - strand, within CA264_21470at 161.188 kb on - strand, within CA264_21470at 161.188 kb on - strand, within CA264_21470at 161.272 kb on + strand, within CA264_21470at 161.366 kb on + strand, within CA264_21470at 161.367 kb on - strand, within CA264_21470at 161.367 kb on - strand, within CA264_21470at 161.367 kb on - strand, within CA264_21470at 161.367 kb on - strand, within CA264_21470at 161.367 kb on - strand, within CA264_21470at 161.367 kb on - strand, within CA264_21470at 161.367 kb on - strand, within CA264_21470at 161.408 kb on + strand, within CA264_21470at 161.408 kb on + strand, within CA264_21470at 161.444 kb on + strandat 161.445 kb on - strandat 161.491 kb on + strandat 161.496 kb on - strandat 161.503 kb on - strandat 161.518 kb on + strandat 161.518 kb on + strandat 161.519 kb on - strandat 161.519 kb on - strandat 161.519 kb on - strandat 161.522 kb on + strandat 161.538 kb on - strandat 161.538 kb on - strandat 161.570 kb on - strandat 161.576 kb on + strandat 161.583 kb on - strandat 161.656 kb on - strandat 161.658 kb on + strandat 161.658 kb on + strandat 161.680 kb on + strandat 161.684 kb on + strandat 161.684 kb on + strandat 161.721 kb on + strandat 161.746 kb on - strandat 161.757 kb on + strandat 161.778 kb on - strandat 161.801 kb on - strandat 161.801 kb on - strandat 161.820 kb on + strandat 161.908 kb on - strandat 161.908 kb on - strandat 161.908 kb on - strandat 162.005 kb on + strandat 162.005 kb on + strandat 162.010 kb on + strandat 162.011 kb on - strandat 162.011 kb on - strandat 162.021 kb on - strandat 162.091 kb on + strandat 162.101 kb on + strandat 162.102 kb on - strandat 162.104 kb on + strandat 162.283 kb on - strandat 162.283 kb on - strandat 162.323 kb on - strandat 162.364 kb on - strandat 162.474 kb on - strand, within CA264_21475at 162.474 kb on - strand, within CA264_21475

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.0025 mg/ml
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160,021 - +1.3
160,021 - +0.5
160,063 - -0.2
160,273 - +0.6
160,273 - -0.2
160,306 - +0.7
160,308 - +1.3
160,367 - CA264_21465 0.17 +1.5
160,503 - CA264_21465 0.46 +1.1
160,619 - CA264_21465 0.71 -0.4
160,709 - +1.3
160,908 + -2.1
160,965 + CA264_21470 0.16 +0.2
160,966 - CA264_21470 0.16 +0.0
161,085 + CA264_21470 0.35 +0.4
161,086 - CA264_21470 0.35 -0.6
161,086 - CA264_21470 0.35 -0.6
161,086 - CA264_21470 0.35 -0.9
161,093 + CA264_21470 0.36 -1.2
161,093 + CA264_21470 0.36 -0.6
161,176 + CA264_21470 0.49 +0.1
161,182 - CA264_21470 0.50 +0.1
161,187 + CA264_21470 0.51 -1.6
161,188 - CA264_21470 0.51 +1.6
161,188 - CA264_21470 0.51 +0.1
161,188 - CA264_21470 0.51 -0.9
161,272 + CA264_21470 0.64 -0.2
161,366 + CA264_21470 0.79 -1.3
161,367 - CA264_21470 0.79 +0.4
161,367 - CA264_21470 0.79 +0.3
161,367 - CA264_21470 0.79 -1.3
161,367 - CA264_21470 0.79 -0.4
161,367 - CA264_21470 0.79 +0.2
161,367 - CA264_21470 0.79 -0.3
161,367 - CA264_21470 0.79 +0.6
161,408 + CA264_21470 0.86 -0.2
161,408 + CA264_21470 0.86 -0.4
161,444 + -0.8
161,445 - -0.5
161,491 + -1.5
161,496 - +0.2
161,503 - -0.7
161,518 + -0.1
161,518 + -2.3
161,519 - -1.7
161,519 - +0.3
161,519 - +2.2
161,522 + -1.3
161,538 - -1.9
161,538 - -0.9
161,570 - -0.7
161,576 + +1.9
161,583 - -0.8
161,656 - -0.6
161,658 + +0.4
161,658 + +1.3
161,680 + -0.9
161,684 + -0.8
161,684 + -1.0
161,721 + -0.7
161,746 - -1.2
161,757 + -1.5
161,778 - -1.0
161,801 - -0.5
161,801 - -2.2
161,820 + -1.0
161,908 - -1.9
161,908 - +0.0
161,908 - +0.4
162,005 + -0.5
162,005 + -1.1
162,010 + -0.8
162,011 - -0.2
162,011 - -0.8
162,021 - -1.8
162,091 + +0.8
162,101 + +1.9
162,102 - -0.5
162,104 + -1.6
162,283 - -0.5
162,283 - +0.5
162,323 - -1.0
162,364 - -1.8
162,474 - CA264_21475 0.11 -0.6
162,474 - CA264_21475 0.11 -0.0

Or see this region's nucleotide sequence