Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_20745

Experiment: m.b. Thallium(I) acetate 0.0025 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_20740 and CA264_20745 are separated by 15 nucleotidesCA264_20745 and CA264_20750 are separated by 1 nucleotides CA264_20740: CA264_20740 - hypothetical protein, at 6,667 to 7,920 _20740 CA264_20745: CA264_20745 - metal transporter, at 7,936 to 9,882 _20745 CA264_20750: CA264_20750 - metal transporter, at 9,884 to 11,164 _20750 Position (kb) 7 8 9 10Strain fitness (log2 ratio) -2 -1 0 1 2at 6.982 kb on - strand, within CA264_20740at 7.001 kb on + strand, within CA264_20740at 7.002 kb on - strand, within CA264_20740at 7.277 kb on - strand, within CA264_20740at 7.306 kb on + strand, within CA264_20740at 7.333 kb on + strand, within CA264_20740at 7.333 kb on + strand, within CA264_20740at 7.334 kb on - strand, within CA264_20740at 7.334 kb on - strand, within CA264_20740at 7.334 kb on - strand, within CA264_20740at 7.407 kb on + strand, within CA264_20740at 7.408 kb on - strand, within CA264_20740at 7.415 kb on + strand, within CA264_20740at 7.415 kb on + strand, within CA264_20740at 7.415 kb on + strand, within CA264_20740at 7.415 kb on + strand, within CA264_20740at 7.415 kb on + strand, within CA264_20740at 7.416 kb on - strand, within CA264_20740at 7.416 kb on - strand, within CA264_20740at 7.416 kb on - strand, within CA264_20740at 7.416 kb on - strand, within CA264_20740at 7.416 kb on - strand, within CA264_20740at 7.416 kb on - strand, within CA264_20740at 7.416 kb on - strand, within CA264_20740at 7.435 kb on - strand, within CA264_20740at 7.469 kb on - strand, within CA264_20740at 7.472 kb on - strand, within CA264_20740at 7.472 kb on - strand, within CA264_20740at 7.505 kb on + strand, within CA264_20740at 7.508 kb on + strand, within CA264_20740at 7.526 kb on + strand, within CA264_20740at 7.625 kb on - strand, within CA264_20740at 7.647 kb on + strand, within CA264_20740at 7.647 kb on + strand, within CA264_20740at 7.648 kb on - strand, within CA264_20740at 7.648 kb on - strand, within CA264_20740at 7.648 kb on - strand, within CA264_20740at 7.686 kb on + strand, within CA264_20740at 7.687 kb on - strand, within CA264_20740at 7.790 kb on + strand, within CA264_20740at 7.820 kb on - strandat 7.821 kb on + strandat 7.822 kb on - strandat 7.857 kb on + strandat 7.898 kb on - strandat 7.909 kb on + strandat 7.910 kb on - strandat 7.937 kb on + strandat 7.938 kb on - strandat 8.004 kb on - strandat 8.004 kb on - strandat 8.199 kb on + strand, within CA264_20745at 8.199 kb on + strand, within CA264_20745at 8.200 kb on - strand, within CA264_20745at 8.259 kb on + strand, within CA264_20745at 8.273 kb on + strand, within CA264_20745at 8.274 kb on - strand, within CA264_20745at 8.295 kb on + strand, within CA264_20745at 8.295 kb on + strand, within CA264_20745at 8.299 kb on + strand, within CA264_20745at 8.300 kb on - strand, within CA264_20745at 8.320 kb on + strand, within CA264_20745at 8.323 kb on - strand, within CA264_20745at 8.430 kb on + strand, within CA264_20745at 8.450 kb on + strand, within CA264_20745at 8.450 kb on + strand, within CA264_20745at 8.494 kb on - strand, within CA264_20745at 8.552 kb on + strand, within CA264_20745at 8.571 kb on + strand, within CA264_20745at 8.738 kb on + strand, within CA264_20745at 8.812 kb on + strand, within CA264_20745at 8.842 kb on - strand, within CA264_20745at 8.949 kb on - strand, within CA264_20745at 8.995 kb on + strand, within CA264_20745at 8.996 kb on - strand, within CA264_20745at 8.996 kb on - strand, within CA264_20745at 8.996 kb on - strand, within CA264_20745at 8.996 kb on - strand, within CA264_20745at 9.004 kb on + strand, within CA264_20745at 9.004 kb on + strand, within CA264_20745at 9.005 kb on - strand, within CA264_20745at 9.030 kb on + strand, within CA264_20745at 9.031 kb on - strand, within CA264_20745at 9.035 kb on + strand, within CA264_20745at 9.035 kb on + strand, within CA264_20745at 9.035 kb on + strand, within CA264_20745at 9.035 kb on + strand, within CA264_20745at 9.036 kb on - strand, within CA264_20745at 9.037 kb on + strand, within CA264_20745at 9.037 kb on + strand, within CA264_20745at 9.037 kb on + strand, within CA264_20745at 9.038 kb on - strand, within CA264_20745at 9.038 kb on - strand, within CA264_20745at 9.038 kb on - strand, within CA264_20745at 9.039 kb on + strand, within CA264_20745at 9.039 kb on + strand, within CA264_20745at 9.040 kb on - strand, within CA264_20745at 9.040 kb on - strand, within CA264_20745at 9.040 kb on - strand, within CA264_20745at 9.062 kb on - strand, within CA264_20745at 9.093 kb on + strand, within CA264_20745at 9.136 kb on + strand, within CA264_20745at 9.136 kb on + strand, within CA264_20745at 9.235 kb on - strand, within CA264_20745at 9.279 kb on - strand, within CA264_20745at 9.311 kb on - strand, within CA264_20745at 9.311 kb on - strand, within CA264_20745at 9.451 kb on + strand, within CA264_20745at 9.452 kb on - strand, within CA264_20745at 9.634 kb on - strand, within CA264_20745at 9.643 kb on + strand, within CA264_20745at 9.644 kb on - strand, within CA264_20745at 9.644 kb on - strand, within CA264_20745at 9.644 kb on - strand, within CA264_20745at 9.675 kb on + strand, within CA264_20745at 9.676 kb on - strand, within CA264_20745at 9.725 kb on - strandat 9.741 kb on + strandat 9.779 kb on - strandat 9.801 kb on + strandat 9.805 kb on - strandat 9.882 kb on + strandat 9.883 kb on - strandat 9.905 kb on + strandat 10.040 kb on - strand, within CA264_20750at 10.070 kb on + strand, within CA264_20750at 10.070 kb on + strand, within CA264_20750at 10.071 kb on - strand, within CA264_20750at 10.071 kb on - strand, within CA264_20750at 10.127 kb on + strand, within CA264_20750at 10.127 kb on + strand, within CA264_20750at 10.200 kb on + strand, within CA264_20750at 10.217 kb on + strand, within CA264_20750at 10.241 kb on + strand, within CA264_20750at 10.283 kb on - strand, within CA264_20750at 10.351 kb on + strand, within CA264_20750at 10.417 kb on + strand, within CA264_20750at 10.419 kb on + strand, within CA264_20750at 10.419 kb on + strand, within CA264_20750at 10.419 kb on + strand, within CA264_20750at 10.419 kb on + strand, within CA264_20750at 10.443 kb on - strand, within CA264_20750at 10.443 kb on - strand, within CA264_20750at 10.443 kb on - strand, within CA264_20750at 10.444 kb on + strand, within CA264_20750at 10.485 kb on + strand, within CA264_20750at 10.486 kb on - strand, within CA264_20750at 10.575 kb on + strand, within CA264_20750at 10.575 kb on + strand, within CA264_20750at 10.575 kb on + strand, within CA264_20750at 10.575 kb on + strand, within CA264_20750at 10.576 kb on - strand, within CA264_20750at 10.576 kb on - strand, within CA264_20750at 10.578 kb on + strand, within CA264_20750at 10.612 kb on - strand, within CA264_20750at 10.720 kb on - strand, within CA264_20750at 10.741 kb on - strand, within CA264_20750at 10.779 kb on - strand, within CA264_20750at 10.818 kb on + strand, within CA264_20750at 10.854 kb on + strand, within CA264_20750at 10.854 kb on + strand, within CA264_20750

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.0025 mg/ml
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6,982 - CA264_20740 0.25 -0.1
7,001 + CA264_20740 0.27 -0.0
7,002 - CA264_20740 0.27 -1.3
7,277 - CA264_20740 0.49 -0.9
7,306 + CA264_20740 0.51 -1.2
7,333 + CA264_20740 0.53 +0.4
7,333 + CA264_20740 0.53 +0.6
7,334 - CA264_20740 0.53 +0.7
7,334 - CA264_20740 0.53 -1.0
7,334 - CA264_20740 0.53 +0.8
7,407 + CA264_20740 0.59 +2.0
7,408 - CA264_20740 0.59 -0.7
7,415 + CA264_20740 0.60 -0.2
7,415 + CA264_20740 0.60 +0.6
7,415 + CA264_20740 0.60 -1.7
7,415 + CA264_20740 0.60 +0.2
7,415 + CA264_20740 0.60 +0.4
7,416 - CA264_20740 0.60 -1.5
7,416 - CA264_20740 0.60 -1.8
7,416 - CA264_20740 0.60 +0.3
7,416 - CA264_20740 0.60 -0.6
7,416 - CA264_20740 0.60 -1.2
7,416 - CA264_20740 0.60 -0.5
7,416 - CA264_20740 0.60 +0.7
7,435 - CA264_20740 0.61 -1.5
7,469 - CA264_20740 0.64 -2.4
7,472 - CA264_20740 0.64 -0.2
7,472 - CA264_20740 0.64 -1.1
7,505 + CA264_20740 0.67 -1.6
7,508 + CA264_20740 0.67 -0.9
7,526 + CA264_20740 0.69 -0.0
7,625 - CA264_20740 0.76 -0.5
7,647 + CA264_20740 0.78 -0.4
7,647 + CA264_20740 0.78 -0.3
7,648 - CA264_20740 0.78 -0.3
7,648 - CA264_20740 0.78 +0.3
7,648 - CA264_20740 0.78 -0.6
7,686 + CA264_20740 0.81 -0.0
7,687 - CA264_20740 0.81 -0.1
7,790 + CA264_20740 0.90 -0.5
7,820 - -0.5
7,821 + +0.1
7,822 - -0.6
7,857 + -0.5
7,898 - -0.4
7,909 + -0.1
7,910 - +1.5
7,937 + +0.2
7,938 - -1.1
8,004 - +0.0
8,004 - -0.6
8,199 + CA264_20745 0.14 -2.0
8,199 + CA264_20745 0.14 +0.2
8,200 - CA264_20745 0.14 +0.1
8,259 + CA264_20745 0.17 -0.1
8,273 + CA264_20745 0.17 -0.4
8,274 - CA264_20745 0.17 +0.4
8,295 + CA264_20745 0.18 +0.8
8,295 + CA264_20745 0.18 +0.1
8,299 + CA264_20745 0.19 +0.1
8,300 - CA264_20745 0.19 -0.6
8,320 + CA264_20745 0.20 +0.2
8,323 - CA264_20745 0.20 -0.2
8,430 + CA264_20745 0.25 -0.2
8,450 + CA264_20745 0.26 +0.5
8,450 + CA264_20745 0.26 -0.2
8,494 - CA264_20745 0.29 -0.2
8,552 + CA264_20745 0.32 -0.6
8,571 + CA264_20745 0.33 +1.9
8,738 + CA264_20745 0.41 -0.2
8,812 + CA264_20745 0.45 -1.2
8,842 - CA264_20745 0.47 -1.1
8,949 - CA264_20745 0.52 -0.5
8,995 + CA264_20745 0.54 -0.0
8,996 - CA264_20745 0.54 -0.1
8,996 - CA264_20745 0.54 +0.0
8,996 - CA264_20745 0.54 +0.5
8,996 - CA264_20745 0.54 -1.9
9,004 + CA264_20745 0.55 +0.1
9,004 + CA264_20745 0.55 -0.2
9,005 - CA264_20745 0.55 +0.3
9,030 + CA264_20745 0.56 +0.4
9,031 - CA264_20745 0.56 -0.6
9,035 + CA264_20745 0.56 +0.4
9,035 + CA264_20745 0.56 +0.8
9,035 + CA264_20745 0.56 -0.6
9,035 + CA264_20745 0.56 +0.1
9,036 - CA264_20745 0.56 +0.3
9,037 + CA264_20745 0.57 -1.5
9,037 + CA264_20745 0.57 -0.5
9,037 + CA264_20745 0.57 +0.1
9,038 - CA264_20745 0.57 +0.5
9,038 - CA264_20745 0.57 +0.5
9,038 - CA264_20745 0.57 -1.7
9,039 + CA264_20745 0.57 +0.9
9,039 + CA264_20745 0.57 +1.4
9,040 - CA264_20745 0.57 -1.6
9,040 - CA264_20745 0.57 -1.3
9,040 - CA264_20745 0.57 -0.0
9,062 - CA264_20745 0.58 -0.2
9,093 + CA264_20745 0.59 +0.5
9,136 + CA264_20745 0.62 +1.3
9,136 + CA264_20745 0.62 -0.7
9,235 - CA264_20745 0.67 -1.2
9,279 - CA264_20745 0.69 -0.6
9,311 - CA264_20745 0.71 -1.1
9,311 - CA264_20745 0.71 +0.0
9,451 + CA264_20745 0.78 +0.5
9,452 - CA264_20745 0.78 -0.9
9,634 - CA264_20745 0.87 -1.0
9,643 + CA264_20745 0.88 +0.6
9,644 - CA264_20745 0.88 -0.9
9,644 - CA264_20745 0.88 +0.5
9,644 - CA264_20745 0.88 -0.4
9,675 + CA264_20745 0.89 +1.3
9,676 - CA264_20745 0.89 -0.1
9,725 - -0.4
9,741 + +0.8
9,779 - -2.0
9,801 + +0.3
9,805 - -0.6
9,882 + -0.2
9,883 - -0.9
9,905 + -0.0
10,040 - CA264_20750 0.12 -2.7
10,070 + CA264_20750 0.15 +0.5
10,070 + CA264_20750 0.15 +0.9
10,071 - CA264_20750 0.15 -0.9
10,071 - CA264_20750 0.15 -0.8
10,127 + CA264_20750 0.19 +2.7
10,127 + CA264_20750 0.19 +0.3
10,200 + CA264_20750 0.25 +0.3
10,217 + CA264_20750 0.26 +0.4
10,241 + CA264_20750 0.28 +1.2
10,283 - CA264_20750 0.31 +0.2
10,351 + CA264_20750 0.36 -0.7
10,417 + CA264_20750 0.42 +1.3
10,419 + CA264_20750 0.42 -1.4
10,419 + CA264_20750 0.42 +0.6
10,419 + CA264_20750 0.42 +0.7
10,419 + CA264_20750 0.42 -1.2
10,443 - CA264_20750 0.44 -0.8
10,443 - CA264_20750 0.44 -0.7
10,443 - CA264_20750 0.44 +1.2
10,444 + CA264_20750 0.44 -0.7
10,485 + CA264_20750 0.47 +1.2
10,486 - CA264_20750 0.47 +0.4
10,575 + CA264_20750 0.54 -1.0
10,575 + CA264_20750 0.54 -0.7
10,575 + CA264_20750 0.54 +0.1
10,575 + CA264_20750 0.54 +0.5
10,576 - CA264_20750 0.54 -2.1
10,576 - CA264_20750 0.54 -0.7
10,578 + CA264_20750 0.54 +0.5
10,612 - CA264_20750 0.57 +1.9
10,720 - CA264_20750 0.65 -1.4
10,741 - CA264_20750 0.67 -0.4
10,779 - CA264_20750 0.70 -1.2
10,818 + CA264_20750 0.73 -0.6
10,854 + CA264_20750 0.76 -0.4
10,854 + CA264_20750 0.76 +0.3

Or see this region's nucleotide sequence