Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_20660

Experiment: m.b. Thallium(I) acetate 0.0025 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_20650 and CA264_20655 are separated by 6 nucleotidesCA264_20655 and CA264_20660 are separated by 166 nucleotidesCA264_20660 and CA264_20665 are separated by 270 nucleotides CA264_20650: CA264_20650 - diviva domain containing protein, at 4,753,664 to 4,754,653 _20650 CA264_20655: CA264_20655 - dihydroneopterin aldolase, at 4,754,660 to 4,755,016 _20655 CA264_20660: CA264_20660 - methylmalonyl Co-A mutase-associated GTPase MeaB, at 4,755,183 to 4,756,163 _20660 CA264_20665: CA264_20665 - hypothetical protein, at 4,756,434 to 4,757,828 _20665 Position (kb) 4755 4756 4757Strain fitness (log2 ratio) -1 0 1 2at 4754.197 kb on + strand, within CA264_20650at 4754.197 kb on + strand, within CA264_20650at 4754.197 kb on + strand, within CA264_20650at 4754.260 kb on + strand, within CA264_20650at 4754.292 kb on - strand, within CA264_20650at 4754.647 kb on - strandat 4755.023 kb on + strandat 4755.027 kb on + strandat 4755.028 kb on - strandat 4755.028 kb on - strandat 4755.092 kb on - strandat 4755.092 kb on - strandat 4755.092 kb on - strandat 4755.127 kb on - strandat 4755.185 kb on - strandat 4755.185 kb on - strandat 4755.185 kb on - strandat 4755.253 kb on - strandat 4755.255 kb on - strandat 4755.289 kb on + strand, within CA264_20660at 4755.325 kb on + strand, within CA264_20660at 4755.326 kb on - strand, within CA264_20660at 4755.326 kb on - strand, within CA264_20660at 4755.326 kb on - strand, within CA264_20660at 4755.326 kb on - strand, within CA264_20660at 4755.326 kb on - strand, within CA264_20660at 4755.742 kb on - strand, within CA264_20660at 4755.743 kb on + strand, within CA264_20660at 4755.743 kb on + strand, within CA264_20660at 4755.743 kb on + strand, within CA264_20660at 4755.743 kb on + strand, within CA264_20660at 4755.744 kb on - strand, within CA264_20660at 4755.822 kb on - strand, within CA264_20660at 4755.935 kb on - strand, within CA264_20660at 4756.036 kb on - strand, within CA264_20660at 4756.131 kb on + strandat 4756.131 kb on + strandat 4756.131 kb on + strandat 4756.132 kb on - strandat 4756.132 kb on - strandat 4756.132 kb on - strandat 4756.135 kb on + strandat 4756.178 kb on - strandat 4756.183 kb on + strandat 4756.184 kb on - strandat 4756.219 kb on - strandat 4756.219 kb on - strandat 4756.255 kb on + strandat 4756.256 kb on - strandat 4756.308 kb on - strandat 4756.316 kb on - strandat 4756.328 kb on - strandat 4756.335 kb on + strandat 4756.336 kb on - strandat 4756.336 kb on - strandat 4756.350 kb on + strandat 4756.429 kb on - strandat 4756.505 kb on - strandat 4756.571 kb on - strandat 4756.608 kb on - strand, within CA264_20665at 4756.734 kb on + strand, within CA264_20665at 4756.735 kb on - strand, within CA264_20665at 4756.748 kb on + strand, within CA264_20665at 4756.835 kb on + strand, within CA264_20665at 4757.105 kb on + strand, within CA264_20665at 4757.105 kb on + strand, within CA264_20665at 4757.126 kb on - strand, within CA264_20665at 4757.126 kb on - strand, within CA264_20665at 4757.133 kb on + strand, within CA264_20665

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.0025 mg/ml
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4,754,197 + CA264_20650 0.54 +0.8
4,754,197 + CA264_20650 0.54 +1.6
4,754,197 + CA264_20650 0.54 -0.5
4,754,260 + CA264_20650 0.60 +0.0
4,754,292 - CA264_20650 0.63 +1.9
4,754,647 - -1.2
4,755,023 + +2.0
4,755,027 + +0.0
4,755,028 - +0.4
4,755,028 - -1.0
4,755,092 - -0.1
4,755,092 - +1.1
4,755,092 - +0.0
4,755,127 - +1.4
4,755,185 - +1.1
4,755,185 - -0.2
4,755,185 - +1.1
4,755,253 - +1.1
4,755,255 - -0.4
4,755,289 + CA264_20660 0.11 +0.7
4,755,325 + CA264_20660 0.14 +0.5
4,755,326 - CA264_20660 0.15 +0.4
4,755,326 - CA264_20660 0.15 +1.3
4,755,326 - CA264_20660 0.15 +0.7
4,755,326 - CA264_20660 0.15 +0.5
4,755,326 - CA264_20660 0.15 +1.0
4,755,742 - CA264_20660 0.57 +1.0
4,755,743 + CA264_20660 0.57 +1.5
4,755,743 + CA264_20660 0.57 +1.0
4,755,743 + CA264_20660 0.57 +2.4
4,755,743 + CA264_20660 0.57 -0.5
4,755,744 - CA264_20660 0.57 +0.6
4,755,822 - CA264_20660 0.65 +1.4
4,755,935 - CA264_20660 0.77 +2.4
4,756,036 - CA264_20660 0.87 +0.0
4,756,131 + +0.9
4,756,131 + +2.6
4,756,131 + +1.2
4,756,132 - +0.4
4,756,132 - +0.4
4,756,132 - +1.4
4,756,135 + +1.1
4,756,178 - -0.1
4,756,183 + +0.7
4,756,184 - +0.2
4,756,219 - +0.3
4,756,219 - +0.5
4,756,255 + +1.6
4,756,256 - +0.5
4,756,308 - +0.5
4,756,316 - +0.9
4,756,328 - +1.3
4,756,335 + +0.6
4,756,336 - +1.0
4,756,336 - +0.6
4,756,350 + +0.4
4,756,429 - +0.6
4,756,505 - +0.7
4,756,571 - -0.8
4,756,608 - CA264_20665 0.12 +1.0
4,756,734 + CA264_20665 0.22 +1.2
4,756,735 - CA264_20665 0.22 +0.8
4,756,748 + CA264_20665 0.23 -0.6
4,756,835 + CA264_20665 0.29 +2.0
4,757,105 + CA264_20665 0.48 -0.9
4,757,105 + CA264_20665 0.48 -0.9
4,757,126 - CA264_20665 0.50 +1.0
4,757,126 - CA264_20665 0.50 +0.8
4,757,133 + CA264_20665 0.50 -1.4

Or see this region's nucleotide sequence