Experiment: m.b. Thallium(I) acetate 0.0025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_20550 and CA264_20555 overlap by 8 nucleotides CA264_20555 and CA264_20560 are separated by 211 nucleotides CA264_20560 and CA264_20565 are separated by 69 nucleotides
CA264_20550: CA264_20550 - GTP cyclohydrolase I FolE, at 4,734,890 to 4,735,558
_20550
CA264_20555: CA264_20555 - 6-pyruvoyl tetrahydrobiopterin synthase, at 4,735,551 to 4,735,958
_20555
CA264_20560: CA264_20560 - DNA repair ATPase, at 4,736,170 to 4,736,868
_20560
CA264_20565: CA264_20565 - hypothetical protein, at 4,736,938 to 4,737,888
_20565
Position (kb) 4736
4737 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 4735.182 kb on + strand, within CA264_20550 at 4735.561 kb on + strand at 4735.562 kb on - strand at 4735.562 kb on - strand at 4735.588 kb on + strand at 4735.589 kb on - strand at 4735.595 kb on + strand, within CA264_20555 at 4735.595 kb on + strand, within CA264_20555 at 4735.828 kb on + strand, within CA264_20555 at 4735.905 kb on - strand, within CA264_20555 at 4735.908 kb on + strand, within CA264_20555 at 4735.958 kb on + strand at 4735.963 kb on + strand at 4735.963 kb on + strand at 4735.963 kb on + strand at 4736.028 kb on - strand at 4736.267 kb on + strand, within CA264_20560 at 4736.300 kb on + strand, within CA264_20560 at 4736.300 kb on + strand, within CA264_20560 at 4736.468 kb on - strand at 4736.468 kb on - strand, within CA264_20560 at 4736.500 kb on + strand, within CA264_20560 at 4736.530 kb on + strand, within CA264_20560 at 4736.575 kb on + strand, within CA264_20560 at 4736.600 kb on + strand, within CA264_20560 at 4736.672 kb on + strand, within CA264_20560 at 4736.685 kb on - strand, within CA264_20560 at 4736.905 kb on + strand at 4736.905 kb on + strand at 4736.935 kb on + strand at 4736.936 kb on - strand at 4736.939 kb on + strand at 4736.940 kb on - strand at 4736.967 kb on + strand at 4736.983 kb on + strand at 4737.108 kb on + strand, within CA264_20565 at 4737.108 kb on + strand, within CA264_20565 at 4737.109 kb on - strand, within CA264_20565 at 4737.109 kb on - strand, within CA264_20565 at 4737.128 kb on + strand, within CA264_20565 at 4737.179 kb on + strand, within CA264_20565 at 4737.180 kb on - strand, within CA264_20565 at 4737.180 kb on - strand, within CA264_20565 at 4737.197 kb on - strand, within CA264_20565 at 4737.199 kb on + strand, within CA264_20565 at 4737.218 kb on - strand, within CA264_20565 at 4737.265 kb on + strand, within CA264_20565 at 4737.265 kb on + strand, within CA264_20565 at 4737.265 kb on + strand, within CA264_20565 at 4737.289 kb on - strand, within CA264_20565 at 4737.296 kb on - strand, within CA264_20565 at 4737.409 kb on - strand, within CA264_20565 at 4737.409 kb on - strand, within CA264_20565 at 4737.440 kb on - strand, within CA264_20565 at 4737.440 kb on - strand, within CA264_20565 at 4737.467 kb on - strand, within CA264_20565 at 4737.480 kb on - strand, within CA264_20565 at 4737.511 kb on + strand, within CA264_20565 at 4737.548 kb on + strand, within CA264_20565 at 4737.574 kb on - strand, within CA264_20565 at 4737.588 kb on - strand, within CA264_20565 at 4737.631 kb on - strand, within CA264_20565 at 4737.631 kb on - strand, within CA264_20565 at 4737.637 kb on - strand, within CA264_20565 at 4737.654 kb on - strand, within CA264_20565 at 4737.833 kb on - strand at 4737.866 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.0025 mg/ml remove 4,735,182 + CA264_20550 0.44 +3.0 4,735,561 + -0.4 4,735,562 - +1.6 4,735,562 - -1.2 4,735,588 + -0.4 4,735,589 - +0.8 4,735,595 + CA264_20555 0.11 -1.5 4,735,595 + CA264_20555 0.11 -0.7 4,735,828 + CA264_20555 0.68 +1.4 4,735,905 - CA264_20555 0.87 -0.8 4,735,908 + CA264_20555 0.88 -1.7 4,735,958 + -1.2 4,735,963 + +0.3 4,735,963 + -1.6 4,735,963 + -1.2 4,736,028 - +0.0 4,736,267 + CA264_20560 0.14 -1.8 4,736,300 + CA264_20560 0.19 -0.2 4,736,300 + CA264_20560 0.19 -0.9 4,736,468 - +1.8 4,736,468 - CA264_20560 0.43 +1.5 4,736,500 + CA264_20560 0.47 -2.0 4,736,530 + CA264_20560 0.52 -1.3 4,736,575 + CA264_20560 0.58 -3.0 4,736,600 + CA264_20560 0.62 -0.4 4,736,672 + CA264_20560 0.72 -0.1 4,736,685 - CA264_20560 0.74 +0.2 4,736,905 + +0.5 4,736,905 + +0.4 4,736,935 + +0.4 4,736,936 - +0.6 4,736,939 + +0.4 4,736,940 - +1.0 4,736,967 + -0.1 4,736,983 + +1.4 4,737,108 + CA264_20565 0.18 -0.1 4,737,108 + CA264_20565 0.18 +0.0 4,737,109 - CA264_20565 0.18 -1.2 4,737,109 - CA264_20565 0.18 +0.0 4,737,128 + CA264_20565 0.20 +1.6 4,737,179 + CA264_20565 0.25 +0.6 4,737,180 - CA264_20565 0.25 -0.6 4,737,180 - CA264_20565 0.25 +0.7 4,737,197 - CA264_20565 0.27 +0.1 4,737,199 + CA264_20565 0.27 +0.3 4,737,218 - CA264_20565 0.29 -0.6 4,737,265 + CA264_20565 0.34 -2.1 4,737,265 + CA264_20565 0.34 +1.0 4,737,265 + CA264_20565 0.34 -0.1 4,737,289 - CA264_20565 0.37 +1.6 4,737,296 - CA264_20565 0.38 -1.2 4,737,409 - CA264_20565 0.50 -0.6 4,737,409 - CA264_20565 0.50 -2.0 4,737,440 - CA264_20565 0.53 +0.7 4,737,440 - CA264_20565 0.53 +0.0 4,737,467 - CA264_20565 0.56 -1.9 4,737,480 - CA264_20565 0.57 -1.3 4,737,511 + CA264_20565 0.60 -1.2 4,737,548 + CA264_20565 0.64 -0.2 4,737,574 - CA264_20565 0.67 +0.0 4,737,588 - CA264_20565 0.68 +0.8 4,737,631 - CA264_20565 0.73 +0.0 4,737,631 - CA264_20565 0.73 +1.5 4,737,637 - CA264_20565 0.74 +1.6 4,737,654 - CA264_20565 0.75 -0.7 4,737,833 - +2.9 4,737,866 - +0.5
Or see this region's nucleotide sequence