Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_19970

Experiment: m.b. Thallium(I) acetate 0.0025 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_19965 and CA264_19970 are separated by 203 nucleotidesCA264_19970 and CA264_19975 are separated by 14 nucleotides CA264_19965: CA264_19965 - dipeptidyl aminopeptidase, at 4,601,686 to 4,602,768 _19965 CA264_19970: CA264_19970 - hypothetical protein, at 4,602,972 to 4,603,226 _19970 CA264_19975: CA264_19975 - hypothetical protein, at 4,603,241 to 4,607,191 _19975 Position (kb) 4602 4603 4604Strain fitness (log2 ratio) -2 -1 0 1 2at 4601.996 kb on - strand, within CA264_19965at 4601.997 kb on + strand, within CA264_19965at 4602.042 kb on - strand, within CA264_19965at 4602.119 kb on - strand, within CA264_19965at 4602.119 kb on - strand, within CA264_19965at 4602.129 kb on + strand, within CA264_19965at 4602.130 kb on - strand, within CA264_19965at 4602.130 kb on - strand, within CA264_19965at 4602.132 kb on - strand, within CA264_19965at 4602.150 kb on - strand, within CA264_19965at 4602.279 kb on - strand, within CA264_19965at 4602.322 kb on + strand, within CA264_19965at 4602.419 kb on + strand, within CA264_19965at 4602.419 kb on + strand, within CA264_19965at 4602.545 kb on - strand, within CA264_19965at 4602.545 kb on - strand, within CA264_19965at 4602.568 kb on - strand, within CA264_19965at 4602.568 kb on - strand, within CA264_19965at 4602.574 kb on + strand, within CA264_19965at 4602.574 kb on + strand, within CA264_19965at 4602.584 kb on - strand, within CA264_19965at 4602.744 kb on + strandat 4602.771 kb on - strandat 4602.771 kb on - strandat 4602.772 kb on + strandat 4602.815 kb on + strandat 4602.830 kb on - strandat 4603.012 kb on + strand, within CA264_19970at 4603.063 kb on - strand, within CA264_19970at 4603.235 kb on + strandat 4603.249 kb on + strandat 4603.262 kb on + strandat 4603.279 kb on + strandat 4603.280 kb on - strandat 4603.345 kb on - strandat 4603.382 kb on - strandat 4603.433 kb on + strandat 4603.433 kb on + strandat 4603.486 kb on + strandat 4603.489 kb on - strandat 4603.528 kb on + strandat 4603.538 kb on + strandat 4603.539 kb on - strandat 4603.712 kb on + strand, within CA264_19975at 4603.713 kb on - strand, within CA264_19975at 4603.713 kb on - strand, within CA264_19975at 4603.824 kb on + strand, within CA264_19975at 4603.824 kb on + strand, within CA264_19975at 4603.829 kb on - strand, within CA264_19975at 4603.831 kb on - strand, within CA264_19975at 4603.863 kb on + strand, within CA264_19975at 4603.895 kb on + strand, within CA264_19975at 4603.895 kb on + strand, within CA264_19975at 4603.953 kb on + strand, within CA264_19975at 4603.977 kb on + strand, within CA264_19975at 4604.056 kb on + strand, within CA264_19975at 4604.056 kb on + strand, within CA264_19975

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.0025 mg/ml
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4,601,996 - CA264_19965 0.29 -1.4
4,601,997 + CA264_19965 0.29 -0.5
4,602,042 - CA264_19965 0.33 +0.8
4,602,119 - CA264_19965 0.40 -0.2
4,602,119 - CA264_19965 0.40 +0.0
4,602,129 + CA264_19965 0.41 -1.2
4,602,130 - CA264_19965 0.41 +0.4
4,602,130 - CA264_19965 0.41 -0.9
4,602,132 - CA264_19965 0.41 +1.0
4,602,150 - CA264_19965 0.43 +0.1
4,602,279 - CA264_19965 0.55 -0.8
4,602,322 + CA264_19965 0.59 -0.8
4,602,419 + CA264_19965 0.68 +0.0
4,602,419 + CA264_19965 0.68 -0.5
4,602,545 - CA264_19965 0.79 -0.7
4,602,545 - CA264_19965 0.79 -1.0
4,602,568 - CA264_19965 0.81 -0.5
4,602,568 - CA264_19965 0.81 -0.6
4,602,574 + CA264_19965 0.82 -0.6
4,602,574 + CA264_19965 0.82 -0.2
4,602,584 - CA264_19965 0.83 -0.1
4,602,744 + +0.3
4,602,771 - -0.0
4,602,771 - +0.9
4,602,772 + -0.5
4,602,815 + +0.4
4,602,830 - -0.2
4,603,012 + CA264_19970 0.16 -1.4
4,603,063 - CA264_19970 0.36 +1.4
4,603,235 + +1.8
4,603,249 + -0.9
4,603,262 + +0.4
4,603,279 + -0.1
4,603,280 - -1.4
4,603,345 - -1.2
4,603,382 - -1.8
4,603,433 + -0.4
4,603,433 + -1.5
4,603,486 + +0.3
4,603,489 - -0.7
4,603,528 + -0.2
4,603,538 + -0.7
4,603,539 - +0.4
4,603,712 + CA264_19975 0.12 -1.2
4,603,713 - CA264_19975 0.12 +0.4
4,603,713 - CA264_19975 0.12 +0.2
4,603,824 + CA264_19975 0.15 +0.2
4,603,824 + CA264_19975 0.15 -1.7
4,603,829 - CA264_19975 0.15 -0.5
4,603,831 - CA264_19975 0.15 +0.4
4,603,863 + CA264_19975 0.16 -1.0
4,603,895 + CA264_19975 0.17 -0.3
4,603,895 + CA264_19975 0.17 -0.8
4,603,953 + CA264_19975 0.18 -0.2
4,603,977 + CA264_19975 0.19 -2.2
4,604,056 + CA264_19975 0.21 -0.4
4,604,056 + CA264_19975 0.21 +0.6

Or see this region's nucleotide sequence