Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_19155

Experiment: m.b. Thallium(I) acetate 0.0025 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_19150 and CA264_19155 are separated by 475 nucleotidesCA264_19155 and CA264_19160 are separated by 56 nucleotidesCA264_19160 and CA264_19165 are separated by 453 nucleotides CA264_19150: CA264_19150 - TonB dependent receptor, at 4,449,080 to 4,450,996 _19150 CA264_19155: CA264_19155 - DNA-3-methyladenine glycosylase, at 4,451,472 to 4,452,071 _19155 CA264_19160: CA264_19160 - GNAT family N-acetyltransferase, at 4,452,128 to 4,452,613 _19160 CA264_19165: CA264_19165 - hypothetical protein, at 4,453,067 to 4,453,330 _19165 Position (kb) 4451 4452 4453Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 4450.524 kb on + strand, within CA264_19150at 4450.573 kb on - strand, within CA264_19150at 4450.573 kb on - strand, within CA264_19150at 4450.748 kb on + strand, within CA264_19150at 4450.749 kb on + strand, within CA264_19150at 4450.750 kb on - strand, within CA264_19150at 4450.750 kb on - strand, within CA264_19150at 4450.756 kb on + strand, within CA264_19150at 4450.757 kb on - strand, within CA264_19150at 4450.757 kb on - strand, within CA264_19150at 4450.761 kb on + strand, within CA264_19150at 4450.809 kb on + strandat 4450.809 kb on + strandat 4450.832 kb on + strandat 4450.833 kb on - strandat 4450.939 kb on + strandat 4450.999 kb on + strandat 4450.999 kb on + strandat 4450.999 kb on + strandat 4451.000 kb on - strandat 4451.010 kb on + strandat 4451.010 kb on + strandat 4451.010 kb on + strandat 4451.011 kb on - strandat 4451.011 kb on - strandat 4451.011 kb on - strandat 4451.011 kb on - strandat 4451.262 kb on - strandat 4451.270 kb on - strandat 4451.282 kb on - strandat 4451.282 kb on - strandat 4451.331 kb on + strandat 4451.410 kb on + strandat 4451.411 kb on - strandat 4451.464 kb on + strandat 4451.541 kb on + strand, within CA264_19155at 4451.542 kb on - strand, within CA264_19155at 4451.542 kb on - strand, within CA264_19155at 4451.547 kb on + strand, within CA264_19155at 4451.547 kb on + strand, within CA264_19155at 4451.547 kb on + strand, within CA264_19155at 4451.548 kb on - strand, within CA264_19155at 4451.548 kb on - strand, within CA264_19155at 4451.671 kb on - strand, within CA264_19155at 4451.671 kb on - strand, within CA264_19155at 4451.671 kb on - strand, within CA264_19155at 4451.691 kb on + strand, within CA264_19155at 4451.691 kb on + strand, within CA264_19155at 4451.692 kb on - strand, within CA264_19155at 4451.692 kb on - strand, within CA264_19155at 4451.692 kb on - strand, within CA264_19155at 4451.695 kb on + strand, within CA264_19155at 4451.695 kb on + strand, within CA264_19155at 4451.695 kb on + strand, within CA264_19155at 4451.696 kb on - strand, within CA264_19155at 4451.697 kb on + strand, within CA264_19155at 4451.715 kb on + strand, within CA264_19155at 4451.715 kb on + strand, within CA264_19155at 4451.717 kb on - strand, within CA264_19155at 4451.751 kb on - strand, within CA264_19155at 4451.791 kb on + strand, within CA264_19155at 4451.792 kb on - strand, within CA264_19155at 4451.832 kb on - strand, within CA264_19155at 4451.832 kb on - strand, within CA264_19155at 4451.833 kb on + strand, within CA264_19155at 4451.921 kb on + strand, within CA264_19155at 4451.948 kb on - strand, within CA264_19155at 4451.992 kb on + strand, within CA264_19155at 4451.993 kb on - strand, within CA264_19155at 4452.095 kb on + strandat 4452.095 kb on + strandat 4452.095 kb on + strandat 4452.113 kb on + strandat 4452.114 kb on - strandat 4452.243 kb on + strand, within CA264_19160at 4452.244 kb on - strand, within CA264_19160at 4452.244 kb on - strand, within CA264_19160at 4452.246 kb on - strand, within CA264_19160at 4452.246 kb on - strand, within CA264_19160at 4452.290 kb on + strand, within CA264_19160at 4452.337 kb on - strand, within CA264_19160at 4452.337 kb on - strand, within CA264_19160at 4452.338 kb on + strand, within CA264_19160at 4452.338 kb on + strand, within CA264_19160at 4452.369 kb on - strand, within CA264_19160at 4452.411 kb on - strand, within CA264_19160at 4452.434 kb on + strand, within CA264_19160at 4452.531 kb on + strand, within CA264_19160at 4452.532 kb on - strand, within CA264_19160at 4452.584 kb on - strandat 4452.590 kb on + strandat 4452.590 kb on + strandat 4452.599 kb on + strandat 4452.600 kb on - strandat 4452.600 kb on - strandat 4452.657 kb on - strandat 4452.660 kb on + strandat 4452.660 kb on + strandat 4452.660 kb on + strandat 4452.661 kb on - strandat 4452.661 kb on - strandat 4452.661 kb on - strandat 4452.661 kb on - strandat 4452.661 kb on - strandat 4452.665 kb on + strandat 4452.666 kb on - strandat 4452.666 kb on - strandat 4452.666 kb on - strandat 4452.666 kb on - strandat 4452.728 kb on + strandat 4452.728 kb on + strandat 4452.729 kb on - strandat 4452.729 kb on - strandat 4452.765 kb on - strandat 4452.770 kb on + strandat 4452.775 kb on + strandat 4452.775 kb on + strandat 4452.775 kb on + strandat 4452.776 kb on - strandat 4452.793 kb on + strandat 4452.793 kb on + strandat 4452.842 kb on + strandat 4453.058 kb on - strandat 4453.068 kb on + strandat 4453.069 kb on - strandat 4453.069 kb on - strandat 4453.069 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.0025 mg/ml
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4,450,524 + CA264_19150 0.75 +0.7
4,450,573 - CA264_19150 0.78 +0.5
4,450,573 - CA264_19150 0.78 -0.9
4,450,748 + CA264_19150 0.87 +0.3
4,450,749 + CA264_19150 0.87 +0.2
4,450,750 - CA264_19150 0.87 +0.3
4,450,750 - CA264_19150 0.87 +0.0
4,450,756 + CA264_19150 0.87 +0.7
4,450,757 - CA264_19150 0.87 +0.6
4,450,757 - CA264_19150 0.87 +1.5
4,450,761 + CA264_19150 0.88 -1.1
4,450,809 + +2.5
4,450,809 + +0.7
4,450,832 + +2.0
4,450,833 - -0.8
4,450,939 + +0.9
4,450,999 + +0.5
4,450,999 + +1.0
4,450,999 + +2.4
4,451,000 - -0.0
4,451,010 + +0.1
4,451,010 + -0.3
4,451,010 + -2.0
4,451,011 - -0.3
4,451,011 - +1.5
4,451,011 - -0.8
4,451,011 - -1.4
4,451,262 - -0.3
4,451,270 - +0.5
4,451,282 - -0.0
4,451,282 - -0.5
4,451,331 + -1.0
4,451,410 + -1.4
4,451,411 - -0.6
4,451,464 + +1.1
4,451,541 + CA264_19155 0.12 +0.5
4,451,542 - CA264_19155 0.12 +0.2
4,451,542 - CA264_19155 0.12 +0.4
4,451,547 + CA264_19155 0.12 -1.0
4,451,547 + CA264_19155 0.12 +0.5
4,451,547 + CA264_19155 0.12 -1.8
4,451,548 - CA264_19155 0.13 -0.0
4,451,548 - CA264_19155 0.13 -0.9
4,451,671 - CA264_19155 0.33 -0.3
4,451,671 - CA264_19155 0.33 +1.0
4,451,671 - CA264_19155 0.33 +0.3
4,451,691 + CA264_19155 0.36 -0.4
4,451,691 + CA264_19155 0.36 -0.1
4,451,692 - CA264_19155 0.37 +0.3
4,451,692 - CA264_19155 0.37 +0.6
4,451,692 - CA264_19155 0.37 -1.4
4,451,695 + CA264_19155 0.37 -1.1
4,451,695 + CA264_19155 0.37 +1.2
4,451,695 + CA264_19155 0.37 -1.6
4,451,696 - CA264_19155 0.37 +1.0
4,451,697 + CA264_19155 0.38 +0.3
4,451,715 + CA264_19155 0.41 -0.3
4,451,715 + CA264_19155 0.41 -0.6
4,451,717 - CA264_19155 0.41 -0.9
4,451,751 - CA264_19155 0.47 +0.9
4,451,791 + CA264_19155 0.53 -0.2
4,451,792 - CA264_19155 0.53 +1.4
4,451,832 - CA264_19155 0.60 +1.5
4,451,832 - CA264_19155 0.60 +0.1
4,451,833 + CA264_19155 0.60 -0.1
4,451,921 + CA264_19155 0.75 -1.2
4,451,948 - CA264_19155 0.79 +1.4
4,451,992 + CA264_19155 0.87 -1.3
4,451,993 - CA264_19155 0.87 +0.3
4,452,095 + -2.3
4,452,095 + -0.3
4,452,095 + -0.3
4,452,113 + -1.9
4,452,114 - -0.1
4,452,243 + CA264_19160 0.24 -0.4
4,452,244 - CA264_19160 0.24 +1.1
4,452,244 - CA264_19160 0.24 +0.6
4,452,246 - CA264_19160 0.24 +0.6
4,452,246 - CA264_19160 0.24 -0.8
4,452,290 + CA264_19160 0.33 +2.2
4,452,337 - CA264_19160 0.43 -0.2
4,452,337 - CA264_19160 0.43 +0.0
4,452,338 + CA264_19160 0.43 -0.2
4,452,338 + CA264_19160 0.43 -2.3
4,452,369 - CA264_19160 0.50 +0.1
4,452,411 - CA264_19160 0.58 +0.7
4,452,434 + CA264_19160 0.63 -1.5
4,452,531 + CA264_19160 0.83 -1.3
4,452,532 - CA264_19160 0.83 +0.1
4,452,584 - +1.8
4,452,590 + +0.4
4,452,590 + +0.2
4,452,599 + -3.1
4,452,600 - +0.1
4,452,600 - -0.8
4,452,657 - -0.7
4,452,660 + -2.7
4,452,660 + -1.0
4,452,660 + +0.5
4,452,661 - +0.7
4,452,661 - +1.6
4,452,661 - +0.1
4,452,661 - +0.2
4,452,661 - -0.4
4,452,665 + -1.7
4,452,666 - +0.7
4,452,666 - -0.2
4,452,666 - -0.1
4,452,666 - +1.5
4,452,728 + +1.9
4,452,728 + -0.1
4,452,729 - -0.8
4,452,729 - -0.0
4,452,765 - -0.1
4,452,770 + -1.8
4,452,775 + +0.9
4,452,775 + +0.5
4,452,775 + -2.6
4,452,776 - +2.8
4,452,793 + +0.5
4,452,793 + -2.0
4,452,842 + +0.2
4,453,058 - -1.1
4,453,068 + -0.2
4,453,069 - -1.3
4,453,069 - -0.8
4,453,069 - -2.0

Or see this region's nucleotide sequence