Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_18700

Experiment: m.b. Thallium(I) acetate 0.0025 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_18695 and CA264_18700 are separated by 70 nucleotidesCA264_18700 and CA264_18705 are separated by 93 nucleotidesCA264_18705 and CA264_18710 are separated by 169 nucleotidesCA264_18710 and CA264_18715 overlap by 8 nucleotides CA264_18695: CA264_18695 - glycogen synthase, at 4,341,194 to 4,342,417 _18695 CA264_18700: CA264_18700 - cytochrome C biogenesis protein, at 4,342,488 to 4,345,085 _18700 CA264_18705: CA264_18705 - cytochrome C biogenesis protein, at 4,345,179 to 4,345,604 _18705 CA264_18710: CA264_18710 - hypothetical protein, at 4,345,774 to 4,346,034 _18710 CA264_18715: CA264_18715 - ABC transporter permease, at 4,346,027 to 4,346,692 _18715 Position (kb) 4342 4343 4344 4345 4346Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 4341.566 kb on + strand, within CA264_18695at 4341.567 kb on - strand, within CA264_18695at 4341.693 kb on + strand, within CA264_18695at 4341.698 kb on + strand, within CA264_18695at 4341.698 kb on + strand, within CA264_18695at 4341.699 kb on - strand, within CA264_18695at 4341.810 kb on + strand, within CA264_18695at 4341.810 kb on + strand, within CA264_18695at 4341.810 kb on + strand, within CA264_18695at 4341.811 kb on - strand, within CA264_18695at 4341.914 kb on + strand, within CA264_18695at 4341.915 kb on - strand, within CA264_18695at 4341.915 kb on - strand, within CA264_18695at 4341.915 kb on - strand, within CA264_18695at 4341.929 kb on + strand, within CA264_18695at 4341.973 kb on + strand, within CA264_18695at 4341.973 kb on + strand, within CA264_18695at 4341.974 kb on - strand, within CA264_18695at 4341.978 kb on + strand, within CA264_18695at 4341.979 kb on - strand, within CA264_18695at 4341.990 kb on + strand, within CA264_18695at 4342.046 kb on + strand, within CA264_18695at 4342.047 kb on - strand, within CA264_18695at 4342.055 kb on + strand, within CA264_18695at 4342.085 kb on + strand, within CA264_18695at 4342.085 kb on + strand, within CA264_18695at 4342.114 kb on + strand, within CA264_18695at 4342.360 kb on + strandat 4342.384 kb on + strandat 4345.180 kb on + strandat 4345.615 kb on + strandat 4345.624 kb on + strandat 4345.631 kb on - strandat 4345.631 kb on - strandat 4345.631 kb on - strandat 4345.643 kb on + strandat 4345.749 kb on + strandat 4345.755 kb on + strandat 4345.755 kb on + strandat 4345.757 kb on + strandat 4346.043 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.0025 mg/ml
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4,341,566 + CA264_18695 0.30 -0.8
4,341,567 - CA264_18695 0.30 +0.4
4,341,693 + CA264_18695 0.41 +1.9
4,341,698 + CA264_18695 0.41 -0.5
4,341,698 + CA264_18695 0.41 -0.6
4,341,699 - CA264_18695 0.41 -0.1
4,341,810 + CA264_18695 0.50 -1.3
4,341,810 + CA264_18695 0.50 -0.4
4,341,810 + CA264_18695 0.50 -2.6
4,341,811 - CA264_18695 0.50 -0.5
4,341,914 + CA264_18695 0.59 -0.2
4,341,915 - CA264_18695 0.59 -0.1
4,341,915 - CA264_18695 0.59 -0.7
4,341,915 - CA264_18695 0.59 -0.9
4,341,929 + CA264_18695 0.60 +0.0
4,341,973 + CA264_18695 0.64 -0.5
4,341,973 + CA264_18695 0.64 -2.6
4,341,974 - CA264_18695 0.64 -1.5
4,341,978 + CA264_18695 0.64 +1.0
4,341,979 - CA264_18695 0.64 -0.6
4,341,990 + CA264_18695 0.65 +0.0
4,342,046 + CA264_18695 0.70 -0.7
4,342,047 - CA264_18695 0.70 -0.8
4,342,055 + CA264_18695 0.70 +0.5
4,342,085 + CA264_18695 0.73 -1.9
4,342,085 + CA264_18695 0.73 -2.1
4,342,114 + CA264_18695 0.75 -2.1
4,342,360 + -0.6
4,342,384 + -3.7
4,345,180 + +0.6
4,345,615 + -0.1
4,345,624 + +0.8
4,345,631 - +0.4
4,345,631 - -0.7
4,345,631 - +0.2
4,345,643 + +1.6
4,345,749 + +4.0
4,345,755 + +4.2
4,345,755 + +3.8
4,345,757 + +3.9
4,346,043 - +0.2

Or see this region's nucleotide sequence