Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_12310
Experiment: m.b. Thallium(I) acetate 0.0025 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Thallium(I) acetate 0.0025 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,868,579 | + | +0.6 | |||
2,868,592 | - | +0.5 | |||
2,868,704 | - | CA264_12310 | 0.41 | +1.8 | |
2,868,704 | - | CA264_12310 | 0.41 | +2.3 | |
2,868,878 | + | -0.2 | |||
2,868,879 | - | +1.3 | |||
2,868,883 | + | -0.6 | |||
2,868,884 | - | +2.2 | |||
2,868,884 | - | +1.4 | |||
2,868,899 | + | -1.1 | |||
2,868,928 | + | -1.1 | |||
2,869,012 | - | -1.2 | |||
2,869,041 | + | -1.1 | |||
2,869,042 | - | +0.3 | |||
2,869,072 | + | +0.3 | |||
2,869,072 | + | -0.2 | |||
2,869,111 | + | -0.2 | |||
2,869,111 | + | -0.2 | |||
2,869,111 | + | -0.1 | |||
2,869,206 | + | CA264_12315 | 0.11 | +0.7 | |
2,869,207 | - | CA264_12315 | 0.11 | -0.3 | |
2,869,207 | - | CA264_12315 | 0.11 | -1.1 | |
2,869,255 | + | CA264_12315 | 0.15 | -0.3 | |
2,869,448 | - | CA264_12315 | 0.30 | -0.2 | |
2,869,524 | - | CA264_12315 | 0.36 | +0.8 | |
2,869,567 | - | CA264_12315 | 0.39 | +0.8 | |
2,869,609 | + | CA264_12315 | 0.43 | -0.0 | |
2,869,610 | - | CA264_12315 | 0.43 | -0.9 | |
2,869,763 | + | CA264_12315 | 0.55 | -0.4 | |
2,869,822 | - | CA264_12315 | 0.59 | -0.7 |
Or see this region's nucleotide sequence