Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_11035

Experiment: m.b. Thallium(I) acetate 0.0025 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_11030 and CA264_11035 are separated by 38 nucleotidesCA264_11035 and CA264_11040 are separated by 185 nucleotides CA264_11030: CA264_11030 - hypothetical protein, at 2,547,258 to 2,548,163 _11030 CA264_11035: CA264_11035 - hypothetical protein, at 2,548,202 to 2,549,320 _11035 CA264_11040: CA264_11040 - tRNA nucleotidyltransferase, at 2,549,506 to 2,550,939 _11040 Position (kb) 2548 2549 2550Strain fitness (log2 ratio) -2 -1 0 1 2at 2547.269 kb on + strandat 2547.380 kb on - strand, within CA264_11030at 2547.380 kb on - strand, within CA264_11030at 2547.499 kb on - strand, within CA264_11030at 2547.499 kb on - strand, within CA264_11030at 2547.549 kb on + strand, within CA264_11030at 2547.549 kb on + strand, within CA264_11030at 2547.549 kb on + strand, within CA264_11030at 2547.550 kb on - strand, within CA264_11030at 2547.586 kb on + strand, within CA264_11030at 2547.587 kb on - strand, within CA264_11030at 2547.622 kb on + strand, within CA264_11030at 2547.623 kb on - strand, within CA264_11030at 2547.638 kb on + strand, within CA264_11030at 2547.639 kb on - strand, within CA264_11030at 2547.730 kb on + strand, within CA264_11030at 2547.731 kb on - strand, within CA264_11030at 2547.756 kb on - strand, within CA264_11030at 2547.806 kb on + strand, within CA264_11030at 2547.806 kb on + strand, within CA264_11030at 2547.807 kb on - strand, within CA264_11030at 2547.807 kb on - strand, within CA264_11030at 2547.807 kb on - strand, within CA264_11030at 2547.891 kb on + strand, within CA264_11030at 2547.892 kb on - strand, within CA264_11030at 2547.895 kb on + strand, within CA264_11030at 2547.998 kb on - strand, within CA264_11030at 2547.998 kb on - strand, within CA264_11030at 2548.030 kb on + strand, within CA264_11030at 2548.031 kb on - strand, within CA264_11030at 2548.058 kb on + strand, within CA264_11030at 2548.199 kb on + strandat 2548.199 kb on + strandat 2548.200 kb on - strandat 2548.208 kb on + strandat 2548.210 kb on + strandat 2548.211 kb on - strandat 2548.211 kb on - strandat 2548.285 kb on + strandat 2548.286 kb on - strandat 2548.306 kb on + strandat 2548.311 kb on + strandat 2548.381 kb on - strand, within CA264_11035at 2548.381 kb on - strand, within CA264_11035at 2548.439 kb on + strand, within CA264_11035at 2548.440 kb on - strand, within CA264_11035at 2548.707 kb on + strand, within CA264_11035at 2548.708 kb on - strand, within CA264_11035at 2548.728 kb on + strand, within CA264_11035at 2548.746 kb on + strand, within CA264_11035at 2548.746 kb on + strand, within CA264_11035at 2548.785 kb on - strand, within CA264_11035at 2548.793 kb on + strand, within CA264_11035at 2548.793 kb on + strand, within CA264_11035at 2548.794 kb on - strand, within CA264_11035at 2548.809 kb on + strand, within CA264_11035at 2548.816 kb on + strand, within CA264_11035at 2548.817 kb on - strand, within CA264_11035at 2548.817 kb on - strand, within CA264_11035at 2548.821 kb on + strand, within CA264_11035at 2548.821 kb on + strand, within CA264_11035at 2548.821 kb on + strand, within CA264_11035at 2548.869 kb on + strand, within CA264_11035at 2548.870 kb on - strand, within CA264_11035at 2548.870 kb on - strand, within CA264_11035at 2548.870 kb on - strand, within CA264_11035at 2548.870 kb on - strand, within CA264_11035at 2548.870 kb on - strand, within CA264_11035at 2548.913 kb on + strand, within CA264_11035at 2548.914 kb on - strand, within CA264_11035at 2549.021 kb on + strand, within CA264_11035at 2549.021 kb on + strand, within CA264_11035at 2549.021 kb on + strand, within CA264_11035at 2549.022 kb on - strand, within CA264_11035at 2549.022 kb on - strand, within CA264_11035at 2549.022 kb on - strand, within CA264_11035at 2549.023 kb on + strand, within CA264_11035at 2549.023 kb on + strand, within CA264_11035at 2549.024 kb on - strand, within CA264_11035at 2549.033 kb on - strand, within CA264_11035at 2549.160 kb on + strand, within CA264_11035at 2549.160 kb on + strand, within CA264_11035at 2549.210 kb on + strandat 2549.211 kb on - strandat 2549.211 kb on - strandat 2549.229 kb on + strandat 2549.229 kb on + strandat 2549.230 kb on - strandat 2549.282 kb on - strandat 2549.288 kb on + strandat 2549.288 kb on + strandat 2549.289 kb on - strandat 2549.319 kb on - strandat 2549.372 kb on + strandat 2549.377 kb on + strandat 2549.377 kb on + strandat 2549.378 kb on - strandat 2549.386 kb on + strandat 2549.386 kb on + strandat 2549.420 kb on + strandat 2549.420 kb on + strandat 2549.421 kb on - strandat 2549.421 kb on - strandat 2549.421 kb on - strandat 2549.424 kb on + strandat 2549.425 kb on - strandat 2549.425 kb on - strandat 2549.425 kb on - strandat 2549.425 kb on - strandat 2549.440 kb on + strandat 2549.441 kb on - strandat 2549.455 kb on + strandat 2549.459 kb on - strandat 2549.483 kb on + strandat 2549.483 kb on + strandat 2549.484 kb on - strandat 2549.484 kb on - strandat 2549.487 kb on + strandat 2549.487 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.0025 mg/ml
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2,547,269 + +0.3
2,547,380 - CA264_11030 0.13 +0.0
2,547,380 - CA264_11030 0.13 +0.6
2,547,499 - CA264_11030 0.27 +1.0
2,547,499 - CA264_11030 0.27 +0.4
2,547,549 + CA264_11030 0.32 -0.1
2,547,549 + CA264_11030 0.32 -0.0
2,547,549 + CA264_11030 0.32 +0.9
2,547,550 - CA264_11030 0.32 +0.5
2,547,586 + CA264_11030 0.36 +0.9
2,547,587 - CA264_11030 0.36 -0.4
2,547,622 + CA264_11030 0.40 -0.8
2,547,623 - CA264_11030 0.40 -0.5
2,547,638 + CA264_11030 0.42 -0.1
2,547,639 - CA264_11030 0.42 +0.5
2,547,730 + CA264_11030 0.52 +0.9
2,547,731 - CA264_11030 0.52 +0.2
2,547,756 - CA264_11030 0.55 -0.7
2,547,806 + CA264_11030 0.60 -0.2
2,547,806 + CA264_11030 0.60 +1.1
2,547,807 - CA264_11030 0.61 +0.4
2,547,807 - CA264_11030 0.61 +1.1
2,547,807 - CA264_11030 0.61 +1.9
2,547,891 + CA264_11030 0.70 -0.2
2,547,892 - CA264_11030 0.70 +0.1
2,547,895 + CA264_11030 0.70 -0.3
2,547,998 - CA264_11030 0.82 +0.4
2,547,998 - CA264_11030 0.82 +0.4
2,548,030 + CA264_11030 0.85 -0.8
2,548,031 - CA264_11030 0.85 +0.1
2,548,058 + CA264_11030 0.88 -0.6
2,548,199 + +0.9
2,548,199 + -0.6
2,548,200 - -0.0
2,548,208 + +0.1
2,548,210 + +0.9
2,548,211 - +0.3
2,548,211 - +0.8
2,548,285 + +0.3
2,548,286 - +0.9
2,548,306 + -0.9
2,548,311 + -0.8
2,548,381 - CA264_11035 0.16 +1.0
2,548,381 - CA264_11035 0.16 +0.7
2,548,439 + CA264_11035 0.21 +0.4
2,548,440 - CA264_11035 0.21 +0.3
2,548,707 + CA264_11035 0.45 -0.0
2,548,708 - CA264_11035 0.45 -0.1
2,548,728 + CA264_11035 0.47 +0.2
2,548,746 + CA264_11035 0.49 -0.7
2,548,746 + CA264_11035 0.49 +0.3
2,548,785 - CA264_11035 0.52 +0.5
2,548,793 + CA264_11035 0.53 -0.7
2,548,793 + CA264_11035 0.53 -1.1
2,548,794 - CA264_11035 0.53 +2.5
2,548,809 + CA264_11035 0.54 +0.3
2,548,816 + CA264_11035 0.55 -1.2
2,548,817 - CA264_11035 0.55 +1.2
2,548,817 - CA264_11035 0.55 +0.7
2,548,821 + CA264_11035 0.55 -0.1
2,548,821 + CA264_11035 0.55 -1.0
2,548,821 + CA264_11035 0.55 +0.6
2,548,869 + CA264_11035 0.60 -0.5
2,548,870 - CA264_11035 0.60 +0.7
2,548,870 - CA264_11035 0.60 +0.5
2,548,870 - CA264_11035 0.60 +0.6
2,548,870 - CA264_11035 0.60 -0.1
2,548,870 - CA264_11035 0.60 +2.6
2,548,913 + CA264_11035 0.64 -1.1
2,548,914 - CA264_11035 0.64 +1.7
2,549,021 + CA264_11035 0.73 -0.2
2,549,021 + CA264_11035 0.73 -0.6
2,549,021 + CA264_11035 0.73 +0.5
2,549,022 - CA264_11035 0.73 +1.3
2,549,022 - CA264_11035 0.73 -1.2
2,549,022 - CA264_11035 0.73 +0.8
2,549,023 + CA264_11035 0.73 +0.7
2,549,023 + CA264_11035 0.73 -0.9
2,549,024 - CA264_11035 0.73 +0.8
2,549,033 - CA264_11035 0.74 +0.6
2,549,160 + CA264_11035 0.86 -1.6
2,549,160 + CA264_11035 0.86 -0.8
2,549,210 + -0.9
2,549,211 - +1.2
2,549,211 - -0.1
2,549,229 + -0.3
2,549,229 + -0.9
2,549,230 - +0.5
2,549,282 - +0.7
2,549,288 + -2.0
2,549,288 + -0.9
2,549,289 - +2.1
2,549,319 - +0.3
2,549,372 + -0.6
2,549,377 + -0.6
2,549,377 + +1.2
2,549,378 - +1.7
2,549,386 + +0.3
2,549,386 + -0.1
2,549,420 + +1.9
2,549,420 + +0.3
2,549,421 - -1.3
2,549,421 - +0.5
2,549,421 - +0.7
2,549,424 + +1.9
2,549,425 - +0.9
2,549,425 - -0.1
2,549,425 - +0.8
2,549,425 - +1.7
2,549,440 + -0.9
2,549,441 - +0.8
2,549,455 + -0.8
2,549,459 - +0.9
2,549,483 + -0.0
2,549,483 + -1.6
2,549,484 - +0.6
2,549,484 - +1.7
2,549,487 + -1.1
2,549,487 + -0.7

Or see this region's nucleotide sequence