Experiment: m.b. Thallium(I) acetate 0.0025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_09215 and CA264_09220 overlap by 4 nucleotides CA264_09220 and CA264_09225 are separated by 201 nucleotides CA264_09225 and CA264_09230 are separated by 3 nucleotides
CA264_09215: CA264_09215 - ferredoxin--NADP(+) reductase, at 2,157,577 to 2,158,593
_09215
CA264_09220: CA264_09220 - ferredoxin, at 2,158,590 to 2,158,913
_09220
CA264_09225: CA264_09225 - Fe-S oxidoreductase, at 2,159,115 to 2,159,855
_09225
CA264_09230: CA264_09230 - hydroxymethylglutaryl-CoA lyase, at 2,159,859 to 2,160,704
_09230
Position (kb)
2158
2159 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2157.597 kb on + strand at 2157.674 kb on + strand at 2157.674 kb on + strand at 2157.736 kb on + strand, within CA264_09215 at 2157.737 kb on - strand, within CA264_09215 at 2157.737 kb on - strand, within CA264_09215 at 2157.839 kb on + strand, within CA264_09215 at 2157.874 kb on - strand, within CA264_09215 at 2157.874 kb on - strand, within CA264_09215 at 2157.982 kb on + strand, within CA264_09215 at 2157.982 kb on + strand, within CA264_09215 at 2157.982 kb on + strand, within CA264_09215 at 2158.003 kb on + strand, within CA264_09215 at 2158.004 kb on - strand, within CA264_09215 at 2158.005 kb on + strand, within CA264_09215 at 2158.005 kb on + strand, within CA264_09215 at 2158.122 kb on - strand, within CA264_09215 at 2158.122 kb on - strand, within CA264_09215 at 2158.173 kb on + strand, within CA264_09215 at 2158.173 kb on + strand, within CA264_09215 at 2158.173 kb on + strand, within CA264_09215 at 2158.173 kb on + strand, within CA264_09215 at 2158.174 kb on - strand, within CA264_09215 at 2158.174 kb on - strand, within CA264_09215 at 2158.174 kb on - strand, within CA264_09215 at 2158.210 kb on - strand, within CA264_09215 at 2158.216 kb on - strand, within CA264_09215 at 2158.216 kb on - strand, within CA264_09215 at 2158.216 kb on - strand, within CA264_09215 at 2158.220 kb on + strand, within CA264_09215 at 2158.220 kb on + strand, within CA264_09215 at 2158.221 kb on - strand, within CA264_09215 at 2158.268 kb on + strand, within CA264_09215 at 2158.402 kb on + strand, within CA264_09215 at 2158.426 kb on + strand, within CA264_09215 at 2158.427 kb on - strand, within CA264_09215 at 2158.427 kb on - strand, within CA264_09215 at 2158.427 kb on - strand, within CA264_09215 at 2158.450 kb on + strand, within CA264_09215 at 2158.451 kb on - strand, within CA264_09215 at 2158.472 kb on + strand, within CA264_09215 at 2158.517 kb on - strand at 2158.521 kb on + strand at 2158.522 kb on - strand at 2158.522 kb on - strand at 2158.528 kb on + strand at 2158.536 kb on + strand at 2158.551 kb on - strand at 2158.584 kb on - strand at 2158.603 kb on + strand at 2158.604 kb on - strand at 2158.609 kb on + strand at 2158.609 kb on + strand at 2158.610 kb on - strand at 2158.610 kb on - strand at 2158.611 kb on + strand at 2158.611 kb on + strand at 2158.611 kb on + strand at 2158.611 kb on + strand at 2158.676 kb on + strand, within CA264_09220 at 2158.754 kb on - strand, within CA264_09220 at 2158.803 kb on + strand, within CA264_09220 at 2158.803 kb on + strand, within CA264_09220 at 2158.803 kb on + strand, within CA264_09220 at 2158.804 kb on - strand, within CA264_09220 at 2158.805 kb on + strand, within CA264_09220 at 2158.806 kb on - strand, within CA264_09220 at 2158.806 kb on - strand, within CA264_09220 at 2158.899 kb on - strand at 2159.020 kb on + strand at 2159.021 kb on - strand at 2159.024 kb on - strand at 2159.060 kb on + strand at 2159.061 kb on - strand at 2159.084 kb on + strand at 2159.084 kb on + strand at 2159.110 kb on + strand at 2159.110 kb on + strand at 2159.111 kb on - strand at 2159.113 kb on - strand at 2159.113 kb on - strand at 2159.113 kb on - strand at 2159.113 kb on - strand at 2159.182 kb on + strand at 2159.228 kb on - strand, within CA264_09225 at 2159.256 kb on + strand, within CA264_09225 at 2159.274 kb on - strand, within CA264_09225 at 2159.285 kb on + strand, within CA264_09225 at 2159.286 kb on - strand, within CA264_09225 at 2159.286 kb on - strand, within CA264_09225 at 2159.286 kb on - strand, within CA264_09225 at 2159.310 kb on - strand, within CA264_09225 at 2159.310 kb on - strand, within CA264_09225 at 2159.376 kb on + strand, within CA264_09225 at 2159.377 kb on - strand, within CA264_09225 at 2159.438 kb on - strand, within CA264_09225 at 2159.444 kb on - strand, within CA264_09225 at 2159.477 kb on + strand, within CA264_09225 at 2159.478 kb on - strand, within CA264_09225 at 2159.578 kb on + strand, within CA264_09225 at 2159.626 kb on + strand, within CA264_09225 at 2159.664 kb on - strand, within CA264_09225 at 2159.739 kb on - strand, within CA264_09225 at 2159.740 kb on + strand, within CA264_09225 at 2159.831 kb on + strand at 2159.839 kb on - strand at 2159.855 kb on + strand at 2159.855 kb on + strand at 2159.856 kb on - strand at 2159.863 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.0025 mg/ml remove 2,157,597 + +0.6 2,157,674 + +1.3 2,157,674 + -1.5 2,157,736 + CA264_09215 0.16 -2.0 2,157,737 - CA264_09215 0.16 +1.5 2,157,737 - CA264_09215 0.16 -1.7 2,157,839 + CA264_09215 0.26 -1.4 2,157,874 - CA264_09215 0.29 +1.3 2,157,874 - CA264_09215 0.29 +0.8 2,157,982 + CA264_09215 0.40 -1.6 2,157,982 + CA264_09215 0.40 -0.4 2,157,982 + CA264_09215 0.40 -1.9 2,158,003 + CA264_09215 0.42 -0.9 2,158,004 - CA264_09215 0.42 +1.4 2,158,005 + CA264_09215 0.42 -0.5 2,158,005 + CA264_09215 0.42 -0.5 2,158,122 - CA264_09215 0.54 +1.9 2,158,122 - CA264_09215 0.54 +1.6 2,158,173 + CA264_09215 0.59 -1.8 2,158,173 + CA264_09215 0.59 -1.3 2,158,173 + CA264_09215 0.59 -0.4 2,158,173 + CA264_09215 0.59 -0.8 2,158,174 - CA264_09215 0.59 +1.0 2,158,174 - CA264_09215 0.59 +1.2 2,158,174 - CA264_09215 0.59 +1.4 2,158,210 - CA264_09215 0.62 +1.9 2,158,216 - CA264_09215 0.63 +1.6 2,158,216 - CA264_09215 0.63 +1.1 2,158,216 - CA264_09215 0.63 +1.3 2,158,220 + CA264_09215 0.63 -0.1 2,158,220 + CA264_09215 0.63 -0.4 2,158,221 - CA264_09215 0.63 -0.0 2,158,268 + CA264_09215 0.68 -0.5 2,158,402 + CA264_09215 0.81 +0.5 2,158,426 + CA264_09215 0.83 -1.2 2,158,427 - CA264_09215 0.84 +2.5 2,158,427 - CA264_09215 0.84 +1.2 2,158,427 - CA264_09215 0.84 +2.3 2,158,450 + CA264_09215 0.86 +1.0 2,158,451 - CA264_09215 0.86 -0.5 2,158,472 + CA264_09215 0.88 -1.0 2,158,517 - +2.0 2,158,521 + -3.0 2,158,522 - +2.0 2,158,522 - +1.7 2,158,528 + -1.5 2,158,536 + -1.0 2,158,551 - +1.7 2,158,584 - +2.0 2,158,603 + -1.2 2,158,604 - +1.5 2,158,609 + -0.7 2,158,609 + -1.4 2,158,610 - +1.4 2,158,610 - +1.6 2,158,611 + -1.6 2,158,611 + -1.7 2,158,611 + -0.5 2,158,611 + -0.2 2,158,676 + CA264_09220 0.27 -1.2 2,158,754 - CA264_09220 0.51 +1.8 2,158,803 + CA264_09220 0.66 -1.6 2,158,803 + CA264_09220 0.66 -0.6 2,158,803 + CA264_09220 0.66 +0.0 2,158,804 - CA264_09220 0.66 +1.5 2,158,805 + CA264_09220 0.66 -1.3 2,158,806 - CA264_09220 0.67 +0.5 2,158,806 - CA264_09220 0.67 +0.5 2,158,899 - +1.0 2,159,020 + -1.2 2,159,021 - -0.2 2,159,024 - +0.4 2,159,060 + +0.6 2,159,061 - -2.0 2,159,084 + +0.5 2,159,084 + +0.2 2,159,110 + +0.2 2,159,110 + -1.0 2,159,111 - -0.4 2,159,113 - -1.1 2,159,113 - +0.7 2,159,113 - -2.2 2,159,113 - -2.1 2,159,182 + -0.4 2,159,228 - CA264_09225 0.15 -1.5 2,159,256 + CA264_09225 0.19 -1.7 2,159,274 - CA264_09225 0.21 -0.2 2,159,285 + CA264_09225 0.23 -0.7 2,159,286 - CA264_09225 0.23 -1.2 2,159,286 - CA264_09225 0.23 -1.6 2,159,286 - CA264_09225 0.23 -2.3 2,159,310 - CA264_09225 0.26 -0.2 2,159,310 - CA264_09225 0.26 -2.6 2,159,376 + CA264_09225 0.35 -1.0 2,159,377 - CA264_09225 0.35 -1.3 2,159,438 - CA264_09225 0.44 -2.3 2,159,444 - CA264_09225 0.44 -1.2 2,159,477 + CA264_09225 0.49 -1.6 2,159,478 - CA264_09225 0.49 -0.7 2,159,578 + CA264_09225 0.62 -1.3 2,159,626 + CA264_09225 0.69 -0.9 2,159,664 - CA264_09225 0.74 -1.8 2,159,739 - CA264_09225 0.84 +0.3 2,159,740 + CA264_09225 0.84 -0.5 2,159,831 + -0.4 2,159,839 - -1.7 2,159,855 + +0.1 2,159,855 + -0.0 2,159,856 - -0.8 2,159,863 - -1.9
Or see this region's nucleotide sequence