Experiment: m.b. Thallium(I) acetate 0.0025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_08260 and CA264_08265 are separated by 260 nucleotides CA264_08265 and CA264_08270 are separated by 33 nucleotides CA264_08270 and CA264_08275 are separated by 19 nucleotides CA264_08275 and CA264_08280 are separated by 0 nucleotides
CA264_08260: CA264_08260 - pseudouridine synthase, at 1,909,432 to 1,910,028
_08260
CA264_08265: CA264_08265 - iron-sulfur cluster assembly accessory protein, at 1,910,289 to 1,910,615
_08265
CA264_08270: CA264_08270 - Fe-S cluster assembly protein SufB, at 1,910,649 to 1,912,103
_08270
CA264_08275: CA264_08275 - ABC transporter ATP-binding protein, at 1,912,123 to 1,912,893
_08275
CA264_08280: CA264_08280 - Fe-S cluster assembly protein SufD, at 1,912,894 to 1,914,234
_08280
Position (kb)
1910
1911
1912
1913 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 1909.649 kb on - strand, within CA264_08260 at 1909.714 kb on - strand, within CA264_08260 at 1909.714 kb on - strand, within CA264_08260 at 1909.719 kb on - strand, within CA264_08260 at 1909.732 kb on + strand, within CA264_08260 at 1909.733 kb on - strand, within CA264_08260 at 1909.758 kb on + strand, within CA264_08260 at 1909.759 kb on - strand, within CA264_08260 at 1909.759 kb on - strand, within CA264_08260 at 1909.759 kb on - strand, within CA264_08260 at 1909.848 kb on + strand, within CA264_08260 at 1909.848 kb on + strand, within CA264_08260 at 1909.976 kb on + strand at 1910.042 kb on - strand at 1910.074 kb on + strand at 1910.135 kb on + strand at 1910.136 kb on - strand at 1910.136 kb on - strand at 1910.136 kb on - strand at 1910.136 kb on - strand at 1910.195 kb on - strand at 1910.199 kb on + strand at 1910.200 kb on - strand at 1910.204 kb on + strand at 1910.204 kb on + strand at 1910.226 kb on + strand at 1910.236 kb on - strand at 1910.240 kb on - strand at 1910.320 kb on - strand at 1910.320 kb on - strand at 1910.368 kb on + strand, within CA264_08265 at 1910.368 kb on + strand, within CA264_08265 at 1910.369 kb on - strand, within CA264_08265 at 1910.472 kb on - strand, within CA264_08265 at 1910.564 kb on + strand, within CA264_08265 at 1910.666 kb on + strand at 1910.667 kb on - strand at 1910.667 kb on - strand at 1910.667 kb on - strand at 1910.669 kb on + strand at 1910.890 kb on + strand, within CA264_08270 at 1910.890 kb on + strand, within CA264_08270 at 1910.903 kb on + strand, within CA264_08270 at 1910.914 kb on - strand, within CA264_08270 at 1910.959 kb on + strand, within CA264_08270 at 1910.960 kb on - strand, within CA264_08270 at 1911.057 kb on - strand, within CA264_08270 at 1911.075 kb on + strand, within CA264_08270 at 1911.104 kb on + strand, within CA264_08270 at 1911.240 kb on + strand, within CA264_08270 at 1911.240 kb on + strand, within CA264_08270 at 1911.241 kb on - strand, within CA264_08270 at 1911.329 kb on + strand, within CA264_08270 at 1911.357 kb on - strand, within CA264_08270 at 1911.360 kb on + strand, within CA264_08270 at 1911.448 kb on + strand, within CA264_08270 at 1911.453 kb on + strand, within CA264_08270 at 1911.454 kb on - strand, within CA264_08270 at 1911.454 kb on - strand, within CA264_08270 at 1911.508 kb on - strand, within CA264_08270 at 1911.571 kb on + strand, within CA264_08270 at 1911.572 kb on - strand, within CA264_08270 at 1911.699 kb on + strand, within CA264_08270 at 1911.728 kb on + strand, within CA264_08270 at 1911.744 kb on - strand, within CA264_08270 at 1911.744 kb on - strand, within CA264_08270 at 1911.771 kb on + strand, within CA264_08270 at 1911.866 kb on + strand, within CA264_08270 at 1911.866 kb on + strand, within CA264_08270 at 1911.866 kb on + strand, within CA264_08270 at 1911.908 kb on - strand, within CA264_08270 at 1911.908 kb on - strand, within CA264_08270 at 1911.973 kb on + strand at 1911.973 kb on + strand at 1911.974 kb on - strand at 1912.012 kb on - strand at 1912.073 kb on - strand at 1912.096 kb on + strand at 1912.097 kb on - strand at 1912.097 kb on - strand at 1912.097 kb on - strand at 1912.097 kb on - strand at 1912.104 kb on + strand at 1912.127 kb on + strand at 1912.154 kb on + strand at 1912.181 kb on + strand at 1912.181 kb on + strand at 1912.181 kb on + strand at 1912.208 kb on + strand, within CA264_08275 at 1912.280 kb on - strand, within CA264_08275 at 1912.280 kb on - strand, within CA264_08275 at 1912.281 kb on + strand, within CA264_08275 at 1912.281 kb on + strand, within CA264_08275 at 1912.286 kb on + strand, within CA264_08275 at 1912.286 kb on + strand, within CA264_08275 at 1912.343 kb on + strand, within CA264_08275 at 1912.406 kb on - strand, within CA264_08275 at 1912.440 kb on - strand, within CA264_08275 at 1912.891 kb on + strand at 1912.891 kb on + strand at 1912.892 kb on - strand at 1912.892 kb on - strand at 1912.911 kb on + strand at 1912.914 kb on - strand at 1912.914 kb on - strand at 1912.989 kb on - strand at 1912.997 kb on + strand at 1913.066 kb on - strand, within CA264_08280 at 1913.067 kb on + strand, within CA264_08280 at 1913.068 kb on - strand, within CA264_08280
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.0025 mg/ml remove 1,909,649 - CA264_08260 0.36 -1.8 1,909,714 - CA264_08260 0.47 -0.6 1,909,714 - CA264_08260 0.47 +0.7 1,909,719 - CA264_08260 0.48 -0.4 1,909,732 + CA264_08260 0.50 -2.7 1,909,733 - CA264_08260 0.50 -1.0 1,909,758 + CA264_08260 0.55 +0.3 1,909,759 - CA264_08260 0.55 -0.2 1,909,759 - CA264_08260 0.55 -1.2 1,909,759 - CA264_08260 0.55 -1.0 1,909,848 + CA264_08260 0.70 -0.9 1,909,848 + CA264_08260 0.70 -2.0 1,909,976 + -2.5 1,910,042 - -0.9 1,910,074 + +0.1 1,910,135 + -0.2 1,910,136 - -1.4 1,910,136 - -1.3 1,910,136 - -1.7 1,910,136 - +0.1 1,910,195 - -2.6 1,910,199 + -0.3 1,910,200 - -1.8 1,910,204 + -2.1 1,910,204 + -0.1 1,910,226 + -1.3 1,910,236 - -1.4 1,910,240 - -1.7 1,910,320 - -1.9 1,910,320 - -0.7 1,910,368 + CA264_08265 0.24 +1.1 1,910,368 + CA264_08265 0.24 +0.9 1,910,369 - CA264_08265 0.24 -2.2 1,910,472 - CA264_08265 0.56 -2.5 1,910,564 + CA264_08265 0.84 +1.7 1,910,666 + +0.3 1,910,667 - +1.6 1,910,667 - +1.2 1,910,667 - +1.0 1,910,669 + +0.7 1,910,890 + CA264_08270 0.17 -0.9 1,910,890 + CA264_08270 0.17 -1.8 1,910,903 + CA264_08270 0.17 +0.2 1,910,914 - CA264_08270 0.18 +0.8 1,910,959 + CA264_08270 0.21 -0.7 1,910,960 - CA264_08270 0.21 +0.7 1,911,057 - CA264_08270 0.28 +0.6 1,911,075 + CA264_08270 0.29 +0.1 1,911,104 + CA264_08270 0.31 +0.1 1,911,240 + CA264_08270 0.41 -1.8 1,911,240 + CA264_08270 0.41 -1.5 1,911,241 - CA264_08270 0.41 +0.0 1,911,329 + CA264_08270 0.47 +0.6 1,911,357 - CA264_08270 0.49 +0.9 1,911,360 + CA264_08270 0.49 -0.2 1,911,448 + CA264_08270 0.55 +0.3 1,911,453 + CA264_08270 0.55 +0.1 1,911,454 - CA264_08270 0.55 +2.2 1,911,454 - CA264_08270 0.55 +1.2 1,911,508 - CA264_08270 0.59 +1.0 1,911,571 + CA264_08270 0.63 +0.5 1,911,572 - CA264_08270 0.63 +0.8 1,911,699 + CA264_08270 0.72 +0.1 1,911,728 + CA264_08270 0.74 +1.1 1,911,744 - CA264_08270 0.75 +0.4 1,911,744 - CA264_08270 0.75 +0.3 1,911,771 + CA264_08270 0.77 -0.5 1,911,866 + CA264_08270 0.84 +0.3 1,911,866 + CA264_08270 0.84 +0.3 1,911,866 + CA264_08270 0.84 +1.1 1,911,908 - CA264_08270 0.87 -0.9 1,911,908 - CA264_08270 0.87 -1.2 1,911,973 + -0.3 1,911,973 + +0.7 1,911,974 - +0.6 1,912,012 - +1.3 1,912,073 - +0.6 1,912,096 + -0.8 1,912,097 - +0.3 1,912,097 - +0.8 1,912,097 - +2.3 1,912,097 - +1.3 1,912,104 + -0.8 1,912,127 + -0.6 1,912,154 + -0.2 1,912,181 + +0.7 1,912,181 + +1.2 1,912,181 + +0.2 1,912,208 + CA264_08275 0.11 +0.8 1,912,280 - CA264_08275 0.20 -0.2 1,912,280 - CA264_08275 0.20 +3.9 1,912,281 + CA264_08275 0.20 +0.9 1,912,281 + CA264_08275 0.20 -2.6 1,912,286 + CA264_08275 0.21 +0.9 1,912,286 + CA264_08275 0.21 +0.0 1,912,343 + CA264_08275 0.29 +0.5 1,912,406 - CA264_08275 0.37 +1.8 1,912,440 - CA264_08275 0.41 +2.1 1,912,891 + +0.0 1,912,891 + -0.0 1,912,892 - +0.2 1,912,892 - +0.1 1,912,911 + +0.3 1,912,914 - +0.7 1,912,914 - +0.6 1,912,989 - +0.1 1,912,997 + +0.3 1,913,066 - CA264_08280 0.13 +0.7 1,913,067 + CA264_08280 0.13 -0.1 1,913,068 - CA264_08280 0.13 +1.0
Or see this region's nucleotide sequence