Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_07625

Experiment: m.b. Thallium(I) acetate 0.0025 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_07620 and CA264_07625 are separated by 101 nucleotidesCA264_07625 and CA264_07630 are separated by 165 nucleotides CA264_07620: CA264_07620 - hypothetical protein, at 1,768,638 to 1,769,384 _07620 CA264_07625: CA264_07625 - phosphohistidine phosphatase, at 1,769,486 to 1,769,983 _07625 CA264_07630: CA264_07630 - DNA topoisomerase I, at 1,770,149 to 1,772,596 _07630 Position (kb) 1769 1770Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 1768.560 kb on - strandat 1768.560 kb on - strandat 1768.595 kb on - strandat 1768.603 kb on - strandat 1768.625 kb on + strandat 1768.626 kb on - strandat 1768.702 kb on + strandat 1768.703 kb on - strandat 1768.746 kb on + strand, within CA264_07620at 1768.747 kb on - strand, within CA264_07620at 1768.747 kb on - strand, within CA264_07620at 1768.821 kb on + strand, within CA264_07620at 1768.851 kb on + strand, within CA264_07620at 1769.026 kb on - strand, within CA264_07620at 1769.063 kb on + strand, within CA264_07620at 1769.225 kb on + strand, within CA264_07620at 1769.319 kb on + strandat 1769.328 kb on - strandat 1769.371 kb on - strandat 1769.371 kb on - strandat 1769.385 kb on - strandat 1769.385 kb on - strandat 1769.419 kb on + strandat 1769.447 kb on + strandat 1769.453 kb on - strandat 1769.468 kb on + strandat 1769.514 kb on - strandat 1769.618 kb on + strand, within CA264_07625at 1769.619 kb on - strand, within CA264_07625at 1769.752 kb on + strand, within CA264_07625at 1769.769 kb on + strand, within CA264_07625at 1769.927 kb on + strand, within CA264_07625at 1769.969 kb on + strandat 1769.984 kb on - strandat 1770.005 kb on - strandat 1770.012 kb on - strandat 1770.012 kb on - strandat 1770.015 kb on - strandat 1770.028 kb on - strandat 1770.061 kb on + strandat 1770.062 kb on - strandat 1770.067 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.0025 mg/ml
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1,768,560 - -2.2
1,768,560 - -0.3
1,768,595 - -2.0
1,768,603 - +0.4
1,768,625 + -0.4
1,768,626 - -0.6
1,768,702 + -0.6
1,768,703 - -0.8
1,768,746 + CA264_07620 0.14 -0.0
1,768,747 - CA264_07620 0.15 +0.8
1,768,747 - CA264_07620 0.15 +0.2
1,768,821 + CA264_07620 0.24 -2.3
1,768,851 + CA264_07620 0.29 -0.9
1,769,026 - CA264_07620 0.52 -2.2
1,769,063 + CA264_07620 0.57 -3.1
1,769,225 + CA264_07620 0.79 +0.4
1,769,319 + -1.8
1,769,328 - -1.3
1,769,371 - -1.6
1,769,371 - +0.0
1,769,385 - -2.6
1,769,385 - -0.6
1,769,419 + -1.6
1,769,447 + -2.5
1,769,453 - -1.8
1,769,468 + -2.8
1,769,514 - +0.7
1,769,618 + CA264_07625 0.27 -0.5
1,769,619 - CA264_07625 0.27 -0.7
1,769,752 + CA264_07625 0.53 -3.1
1,769,769 + CA264_07625 0.57 -2.0
1,769,927 + CA264_07625 0.89 -2.8
1,769,969 + -1.5
1,769,984 - +0.1
1,770,005 - -0.4
1,770,012 - -0.4
1,770,012 - -0.1
1,770,015 - -0.2
1,770,028 - -0.8
1,770,061 + -2.1
1,770,062 - +2.0
1,770,067 - +0.8

Or see this region's nucleotide sequence