Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_06535

Experiment: m.b. Thallium(I) acetate 0.0025 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_06525 and CA264_06530 are separated by 180 nucleotidesCA264_06530 and CA264_06535 are separated by 21 nucleotidesCA264_06535 and CA264_06540 are separated by 2 nucleotidesCA264_06540 and CA264_06545 are separated by 68 nucleotides CA264_06525: CA264_06525 - monofunctional biosynthetic peptidoglycan transglycosylase, at 1,506,595 to 1,507,329 _06525 CA264_06530: CA264_06530 - peptidase, at 1,507,510 to 1,508,154 _06530 CA264_06535: CA264_06535 - metallophosphoesterase, at 1,508,176 to 1,509,390 _06535 CA264_06540: CA264_06540 - hypothetical protein, at 1,509,393 to 1,510,298 _06540 CA264_06545: CA264_06545 - peptidase M48 Ste24p, at 1,510,367 to 1,511,176 _06545 Position (kb) 1508 1509 1510Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 1507.270 kb on - strandat 1507.282 kb on + strandat 1507.298 kb on - strandat 1507.298 kb on - strandat 1507.388 kb on + strandat 1507.388 kb on + strandat 1507.388 kb on + strandat 1507.394 kb on + strandat 1507.394 kb on + strandat 1507.394 kb on + strandat 1507.395 kb on - strandat 1507.477 kb on + strandat 1507.478 kb on - strandat 1507.483 kb on + strandat 1507.484 kb on - strandat 1507.493 kb on - strandat 1507.496 kb on + strandat 1507.496 kb on + strandat 1507.496 kb on + strandat 1507.496 kb on + strandat 1507.496 kb on + strandat 1507.496 kb on + strandat 1507.497 kb on - strandat 1507.497 kb on - strandat 1507.497 kb on - strandat 1507.497 kb on - strandat 1507.523 kb on + strandat 1507.523 kb on + strandat 1507.529 kb on - strandat 1507.676 kb on + strand, within CA264_06530at 1507.677 kb on - strand, within CA264_06530at 1507.811 kb on - strand, within CA264_06530at 1507.832 kb on + strand, within CA264_06530at 1507.832 kb on + strand, within CA264_06530at 1507.836 kb on - strand, within CA264_06530at 1507.889 kb on + strand, within CA264_06530at 1508.018 kb on + strand, within CA264_06530at 1508.018 kb on + strand, within CA264_06530at 1508.048 kb on + strand, within CA264_06530at 1508.048 kb on + strand, within CA264_06530at 1508.058 kb on - strand, within CA264_06530at 1508.173 kb on + strandat 1508.174 kb on - strandat 1508.186 kb on - strandat 1508.218 kb on - strandat 1508.218 kb on - strandat 1508.250 kb on + strandat 1508.250 kb on + strandat 1508.250 kb on + strandat 1508.251 kb on - strandat 1508.251 kb on - strandat 1508.251 kb on - strandat 1508.251 kb on - strandat 1508.251 kb on - strandat 1508.251 kb on - strandat 1508.465 kb on - strand, within CA264_06535at 1508.542 kb on - strand, within CA264_06535at 1508.674 kb on + strand, within CA264_06535at 1508.675 kb on - strand, within CA264_06535at 1508.675 kb on - strand, within CA264_06535at 1508.704 kb on - strand, within CA264_06535at 1508.745 kb on + strand, within CA264_06535at 1508.746 kb on - strand, within CA264_06535at 1508.794 kb on + strand, within CA264_06535at 1508.794 kb on + strandat 1508.817 kb on - strand, within CA264_06535at 1508.817 kb on - strand, within CA264_06535at 1508.878 kb on - strand, within CA264_06535at 1508.878 kb on - strand, within CA264_06535at 1508.934 kb on - strand, within CA264_06535at 1508.976 kb on - strand, within CA264_06535at 1508.977 kb on + strand, within CA264_06535at 1508.977 kb on + strand, within CA264_06535at 1508.977 kb on + strand, within CA264_06535at 1508.977 kb on + strand, within CA264_06535at 1508.978 kb on - strand, within CA264_06535at 1508.978 kb on - strand, within CA264_06535at 1508.978 kb on - strand, within CA264_06535at 1508.978 kb on - strand, within CA264_06535at 1508.978 kb on - strand, within CA264_06535at 1509.061 kb on + strand, within CA264_06535at 1509.105 kb on + strand, within CA264_06535at 1509.105 kb on + strand, within CA264_06535at 1509.105 kb on + strand, within CA264_06535at 1509.106 kb on - strand, within CA264_06535at 1509.106 kb on - strand, within CA264_06535at 1509.118 kb on + strand, within CA264_06535at 1509.118 kb on + strand, within CA264_06535at 1509.172 kb on + strand, within CA264_06535at 1509.172 kb on + strand, within CA264_06535at 1509.172 kb on + strand, within CA264_06535at 1509.180 kb on - strand, within CA264_06535at 1509.180 kb on - strand, within CA264_06535at 1509.180 kb on - strand, within CA264_06535at 1509.269 kb on - strandat 1509.269 kb on - strandat 1509.271 kb on + strandat 1509.271 kb on + strandat 1509.389 kb on - strandat 1509.437 kb on + strandat 1509.518 kb on - strand, within CA264_06540at 1509.540 kb on + strand, within CA264_06540at 1509.541 kb on - strand, within CA264_06540at 1509.541 kb on - strand, within CA264_06540at 1509.553 kb on + strand, within CA264_06540at 1509.587 kb on + strand, within CA264_06540at 1509.589 kb on + strand, within CA264_06540at 1509.590 kb on - strand, within CA264_06540at 1509.594 kb on + strand, within CA264_06540at 1509.595 kb on - strand, within CA264_06540at 1509.723 kb on - strand, within CA264_06540at 1509.782 kb on - strand, within CA264_06540at 1509.790 kb on + strand, within CA264_06540at 1509.790 kb on + strand, within CA264_06540at 1509.791 kb on - strand, within CA264_06540at 1510.111 kb on + strand, within CA264_06540at 1510.111 kb on + strand, within CA264_06540at 1510.185 kb on + strand, within CA264_06540at 1510.187 kb on + strand, within CA264_06540at 1510.187 kb on + strand, within CA264_06540at 1510.188 kb on - strand, within CA264_06540at 1510.254 kb on - strandat 1510.314 kb on + strandat 1510.315 kb on - strandat 1510.317 kb on + strandat 1510.329 kb on + strandat 1510.329 kb on + strandat 1510.329 kb on + strandat 1510.329 kb on + strandat 1510.333 kb on + strandat 1510.334 kb on - strandat 1510.334 kb on - strandat 1510.336 kb on + strandat 1510.336 kb on + strandat 1510.337 kb on - strandat 1510.337 kb on - strandat 1510.342 kb on - strandat 1510.346 kb on + strandat 1510.346 kb on + strandat 1510.347 kb on - strandat 1510.369 kb on - strandat 1510.369 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.0025 mg/ml
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1,507,270 - -1.2
1,507,282 + -1.3
1,507,298 - -1.2
1,507,298 - -0.5
1,507,388 + -0.4
1,507,388 + -1.2
1,507,388 + +1.3
1,507,394 + +0.3
1,507,394 + -2.1
1,507,394 + -0.2
1,507,395 - -1.5
1,507,477 + -1.2
1,507,478 - +0.3
1,507,483 + -0.5
1,507,484 - -1.5
1,507,493 - +0.2
1,507,496 + -1.2
1,507,496 + +0.7
1,507,496 + +0.5
1,507,496 + +0.1
1,507,496 + -0.3
1,507,496 + -0.4
1,507,497 - +0.5
1,507,497 - -0.7
1,507,497 - -0.3
1,507,497 - -2.2
1,507,523 + -0.8
1,507,523 + -1.5
1,507,529 - -0.3
1,507,676 + CA264_06530 0.26 -0.3
1,507,677 - CA264_06530 0.26 +0.3
1,507,811 - CA264_06530 0.47 -0.1
1,507,832 + CA264_06530 0.50 -0.4
1,507,832 + CA264_06530 0.50 -1.6
1,507,836 - CA264_06530 0.51 -0.7
1,507,889 + CA264_06530 0.59 -0.2
1,508,018 + CA264_06530 0.79 -1.4
1,508,018 + CA264_06530 0.79 -1.2
1,508,048 + CA264_06530 0.83 +0.3
1,508,048 + CA264_06530 0.83 -1.0
1,508,058 - CA264_06530 0.85 -0.4
1,508,173 + -0.6
1,508,174 - -1.0
1,508,186 - +0.9
1,508,218 - -0.2
1,508,218 - -2.1
1,508,250 + -0.9
1,508,250 + -0.6
1,508,250 + +0.2
1,508,251 - -0.1
1,508,251 - -0.6
1,508,251 - -0.2
1,508,251 - -0.2
1,508,251 - -1.1
1,508,251 - -0.4
1,508,465 - CA264_06535 0.24 -0.8
1,508,542 - CA264_06535 0.30 +0.3
1,508,674 + CA264_06535 0.41 -0.9
1,508,675 - CA264_06535 0.41 +0.1
1,508,675 - CA264_06535 0.41 +0.2
1,508,704 - CA264_06535 0.43 +2.3
1,508,745 + CA264_06535 0.47 -0.4
1,508,746 - CA264_06535 0.47 +0.0
1,508,794 + CA264_06535 0.51 -0.7
1,508,794 + +1.0
1,508,817 - CA264_06535 0.53 +0.8
1,508,817 - CA264_06535 0.53 -0.0
1,508,878 - CA264_06535 0.58 -2.4
1,508,878 - CA264_06535 0.58 -0.2
1,508,934 - CA264_06535 0.62 -0.2
1,508,976 - CA264_06535 0.66 -2.1
1,508,977 + CA264_06535 0.66 +0.7
1,508,977 + CA264_06535 0.66 -1.9
1,508,977 + CA264_06535 0.66 +0.7
1,508,977 + CA264_06535 0.66 +0.7
1,508,978 - CA264_06535 0.66 -1.6
1,508,978 - CA264_06535 0.66 -1.5
1,508,978 - CA264_06535 0.66 -0.4
1,508,978 - CA264_06535 0.66 -1.1
1,508,978 - CA264_06535 0.66 -1.2
1,509,061 + CA264_06535 0.73 -0.5
1,509,105 + CA264_06535 0.76 -0.7
1,509,105 + CA264_06535 0.76 -0.3
1,509,105 + CA264_06535 0.76 -0.2
1,509,106 - CA264_06535 0.77 +0.7
1,509,106 - CA264_06535 0.77 -2.1
1,509,118 + CA264_06535 0.78 -0.2
1,509,118 + CA264_06535 0.78 -0.7
1,509,172 + CA264_06535 0.82 -1.0
1,509,172 + CA264_06535 0.82 -1.7
1,509,172 + CA264_06535 0.82 -1.3
1,509,180 - CA264_06535 0.83 -0.9
1,509,180 - CA264_06535 0.83 -0.0
1,509,180 - CA264_06535 0.83 +0.5
1,509,269 - -0.4
1,509,269 - -1.0
1,509,271 + -1.5
1,509,271 + -0.7
1,509,389 - -0.4
1,509,437 + -0.7
1,509,518 - CA264_06540 0.14 -1.8
1,509,540 + CA264_06540 0.16 -2.0
1,509,541 - CA264_06540 0.16 +0.1
1,509,541 - CA264_06540 0.16 -1.4
1,509,553 + CA264_06540 0.18 -3.0
1,509,587 + CA264_06540 0.21 +0.5
1,509,589 + CA264_06540 0.22 -2.3
1,509,590 - CA264_06540 0.22 -1.7
1,509,594 + CA264_06540 0.22 -1.4
1,509,595 - CA264_06540 0.22 -2.2
1,509,723 - CA264_06540 0.36 -2.2
1,509,782 - CA264_06540 0.43 -2.7
1,509,790 + CA264_06540 0.44 -2.5
1,509,790 + CA264_06540 0.44 -1.7
1,509,791 - CA264_06540 0.44 -3.7
1,510,111 + CA264_06540 0.79 -4.2
1,510,111 + CA264_06540 0.79 -2.6
1,510,185 + CA264_06540 0.87 -0.4
1,510,187 + CA264_06540 0.88 -2.3
1,510,187 + CA264_06540 0.88 -1.4
1,510,188 - CA264_06540 0.88 -0.8
1,510,254 - -1.2
1,510,314 + +1.2
1,510,315 - +0.8
1,510,317 + -0.0
1,510,329 + +2.3
1,510,329 + +0.9
1,510,329 + +0.6
1,510,329 + -0.0
1,510,333 + +0.4
1,510,334 - +3.2
1,510,334 - +1.3
1,510,336 + +0.8
1,510,336 + -0.1
1,510,337 - +1.9
1,510,337 - +1.2
1,510,342 - -0.7
1,510,346 + +1.2
1,510,346 + +0.5
1,510,347 - +1.5
1,510,369 - +2.6
1,510,369 - +0.9

Or see this region's nucleotide sequence