Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_04935
Experiment: m.b. Thallium(I) acetate 0.0025 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Thallium(I) acetate 0.0025 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,145,011 | + | -0.2 | |||
1,145,015 | + | -0.5 | |||
1,145,015 | + | -1.4 | |||
1,145,016 | - | -1.0 | |||
1,145,053 | + | -1.5 | |||
1,145,054 | - | -0.0 | |||
1,145,054 | - | -1.0 | |||
1,145,054 | - | -0.5 | |||
1,145,054 | - | -0.0 | |||
1,145,055 | + | -1.5 | |||
1,145,069 | + | -1.8 | |||
1,145,069 | + | -0.4 | |||
1,145,089 | - | +0.9 | |||
1,145,129 | + | -2.4 | |||
1,145,130 | - | +0.4 | |||
1,145,178 | + | -0.7 | |||
1,145,178 | + | -1.8 | |||
1,145,179 | - | +0.0 | |||
1,145,191 | - | -0.2 | |||
1,145,229 | + | -1.4 | |||
1,145,230 | - | +0.6 | |||
1,145,234 | - | -0.5 | |||
1,145,241 | + | -1.6 | |||
1,145,923 | + | CA264_04935 | 0.22 | -1.0 | |
1,146,065 | + | CA264_04935 | 0.26 | +0.3 | |
1,147,692 | - | CA264_04935 | 0.78 | -1.2 | |
1,147,710 | - | CA264_04935 | 0.79 | -2.9 | |
1,147,712 | + | CA264_04935 | 0.79 | -0.1 | |
1,147,712 | + | CA264_04935 | 0.79 | -1.8 | |
1,147,712 | + | CA264_04935 | 0.79 | -0.1 | |
1,148,024 | + | CA264_04935 | 0.89 | -2.1 | |
1,148,026 | + | CA264_04935 | 0.89 | +1.9 | |
1,148,161 | + | -1.2 | |||
1,148,172 | + | +1.3 | |||
1,148,301 | + | -2.1 | |||
1,148,373 | - | -1.1 | |||
1,148,404 | + | -2.3 | |||
1,148,417 | - | +0.1 | |||
1,148,671 | - | CA264_04940 | 0.16 | -1.1 | |
1,148,814 | - | CA264_04940 | 0.24 | -0.4 | |
1,148,860 | + | CA264_04940 | 0.27 | +0.6 |
Or see this region's nucleotide sequence