Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_03325

Experiment: m.b. Thallium(I) acetate 0.0025 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_03320 and CA264_03325 are separated by 248 nucleotidesCA264_03325 and CA264_03330 are separated by 147 nucleotidesCA264_03330 and CA264_03335 are separated by 106 nucleotides CA264_03320: CA264_03320 - hypothetical protein, at 778,991 to 780,139 _03320 CA264_03325: CA264_03325 - hypothetical protein, at 780,388 to 780,597 _03325 CA264_03330: CA264_03330 - peptide-methionine (R)-S-oxide reductase, at 780,745 to 781,200 _03330 CA264_03335: CA264_03335 - glyoxylate/hydroxypyruvate reductase A, at 781,307 to 782,236 _03335 Position (kb) 780 781Strain fitness (log2 ratio) -3 -2 -1 0 1at 779.416 kb on + strand, within CA264_03320at 779.512 kb on + strand, within CA264_03320at 779.540 kb on - strand, within CA264_03320at 779.540 kb on - strand, within CA264_03320at 779.715 kb on - strand, within CA264_03320at 779.860 kb on - strand, within CA264_03320at 780.166 kb on + strandat 780.166 kb on + strandat 780.166 kb on + strandat 780.169 kb on + strandat 780.170 kb on - strandat 780.170 kb on - strandat 780.191 kb on - strandat 780.214 kb on - strandat 780.220 kb on + strandat 780.323 kb on + strandat 780.324 kb on - strandat 780.338 kb on + strandat 780.339 kb on - strandat 780.339 kb on - strandat 780.342 kb on + strandat 780.354 kb on - strandat 780.358 kb on + strandat 780.358 kb on + strandat 780.358 kb on + strandat 780.358 kb on + strandat 780.358 kb on + strandat 780.362 kb on + strandat 780.362 kb on + strandat 780.362 kb on + strandat 780.362 kb on + strandat 780.363 kb on - strandat 780.363 kb on - strandat 780.363 kb on - strandat 780.363 kb on - strandat 780.364 kb on + strandat 780.364 kb on + strandat 780.365 kb on - strandat 780.365 kb on - strandat 780.365 kb on - strandat 780.372 kb on - strandat 780.377 kb on + strandat 780.377 kb on + strandat 780.377 kb on + strandat 780.378 kb on - strandat 780.379 kb on + strandat 780.384 kb on + strandat 780.384 kb on + strandat 780.384 kb on + strandat 780.384 kb on + strandat 780.387 kb on - strandat 780.472 kb on + strand, within CA264_03325at 780.473 kb on - strand, within CA264_03325at 780.566 kb on - strand, within CA264_03325at 780.586 kb on + strandat 780.634 kb on - strandat 780.643 kb on - strandat 780.647 kb on + strandat 780.647 kb on + strandat 780.647 kb on + strandat 780.647 kb on + strandat 780.647 kb on + strandat 780.647 kb on + strandat 780.648 kb on - strandat 780.648 kb on - strandat 780.648 kb on - strandat 780.657 kb on + strandat 780.657 kb on + strandat 780.658 kb on - strandat 780.658 kb on - strandat 780.668 kb on + strandat 780.668 kb on + strandat 780.677 kb on + strandat 780.685 kb on - strandat 780.700 kb on + strandat 780.702 kb on + strandat 780.702 kb on + strandat 780.702 kb on + strandat 780.713 kb on + strandat 780.713 kb on + strandat 780.714 kb on - strandat 780.792 kb on - strand, within CA264_03330at 780.903 kb on - strand, within CA264_03330at 781.040 kb on + strand, within CA264_03330at 781.050 kb on + strand, within CA264_03330at 781.163 kb on + strandat 781.177 kb on + strandat 781.269 kb on + strandat 781.304 kb on + strandat 781.304 kb on + strandat 781.304 kb on + strandat 781.305 kb on - strandat 781.305 kb on - strandat 781.317 kb on + strandat 781.318 kb on - strandat 781.318 kb on - strandat 781.318 kb on - strandat 781.318 kb on - strandat 781.320 kb on + strandat 781.321 kb on - strandat 781.323 kb on + strandat 781.324 kb on - strandat 781.327 kb on + strandat 781.328 kb on - strandat 781.472 kb on + strand, within CA264_03335at 781.570 kb on - strand, within CA264_03335

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.0025 mg/ml
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779,416 + CA264_03320 0.37 +0.3
779,512 + CA264_03320 0.45 +0.1
779,540 - CA264_03320 0.48 +0.8
779,540 - CA264_03320 0.48 +0.9
779,715 - CA264_03320 0.63 -0.3
779,860 - CA264_03320 0.76 -0.2
780,166 + -0.6
780,166 + -0.7
780,166 + +1.0
780,169 + -1.0
780,170 - +0.5
780,170 - -1.7
780,191 - -0.7
780,214 - -0.4
780,220 + -0.8
780,323 + -0.1
780,324 - -0.3
780,338 + -1.1
780,339 - -0.2
780,339 - -0.6
780,342 + -0.5
780,354 - -0.9
780,358 + +0.4
780,358 + -0.9
780,358 + +0.4
780,358 + -0.5
780,358 + -0.8
780,362 + -0.3
780,362 + -0.4
780,362 + +1.1
780,362 + -1.2
780,363 - -1.5
780,363 - -0.9
780,363 - -1.4
780,363 - -1.8
780,364 + +0.7
780,364 + +0.1
780,365 - -1.0
780,365 - -1.1
780,365 - +0.4
780,372 - -0.6
780,377 + +0.1
780,377 + +0.7
780,377 + -2.9
780,378 - -2.5
780,379 + -0.6
780,384 + -1.2
780,384 + -0.6
780,384 + -0.6
780,384 + +1.0
780,387 - +0.4
780,472 + CA264_03325 0.40 -0.3
780,473 - CA264_03325 0.40 -1.0
780,566 - CA264_03325 0.85 -2.5
780,586 + -0.8
780,634 - -0.3
780,643 - -1.0
780,647 + -3.2
780,647 + -0.6
780,647 + -2.4
780,647 + -1.7
780,647 + -0.6
780,647 + -1.8
780,648 - -0.8
780,648 - -1.0
780,648 - -1.3
780,657 + -1.0
780,657 + -1.7
780,658 - -1.1
780,658 - -0.6
780,668 + -1.3
780,668 + -2.7
780,677 + -1.7
780,685 - -0.7
780,700 + -0.6
780,702 + +1.4
780,702 + -0.4
780,702 + -0.9
780,713 + +0.9
780,713 + -1.2
780,714 - -0.6
780,792 - CA264_03330 0.10 -0.9
780,903 - CA264_03330 0.35 +0.1
781,040 + CA264_03330 0.65 +0.9
781,050 + CA264_03330 0.67 -0.4
781,163 + -0.5
781,177 + -0.7
781,269 + -0.1
781,304 + +1.5
781,304 + -1.7
781,304 + -1.6
781,305 - -1.4
781,305 - +0.2
781,317 + +1.4
781,318 - -0.4
781,318 - +1.7
781,318 - -0.2
781,318 - -0.5
781,320 + -1.7
781,321 - -1.2
781,323 + -1.0
781,324 - -0.8
781,327 + -2.8
781,328 - -1.9
781,472 + CA264_03335 0.18 -1.4
781,570 - CA264_03335 0.28 -2.5

Or see this region's nucleotide sequence