Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_03255

Experiment: m.b. Thallium(I) acetate 0.0025 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_03250 and CA264_03255 are separated by 161 nucleotidesCA264_03255 and CA264_03260 are separated by 192 nucleotides CA264_03250: CA264_03250 - metal transporter, at 765,131 to 766,405 _03250 CA264_03255: CA264_03255 - hypothetical protein, at 766,567 to 767,004 _03255 CA264_03260: CA264_03260 - MBL fold hydrolase, at 767,197 to 768,039 _03260 Position (kb) 766 767 768Strain fitness (log2 ratio) -2 -1 0 1 2at 765.726 kb on + strand, within CA264_03250at 765.727 kb on - strand, within CA264_03250at 765.727 kb on - strand, within CA264_03250at 765.772 kb on + strand, within CA264_03250at 765.772 kb on + strand, within CA264_03250at 765.816 kb on + strand, within CA264_03250at 765.816 kb on + strand, within CA264_03250at 765.816 kb on + strand, within CA264_03250at 765.817 kb on - strand, within CA264_03250at 765.817 kb on - strand, within CA264_03250at 765.817 kb on - strand, within CA264_03250at 765.819 kb on + strand, within CA264_03250at 765.820 kb on - strand, within CA264_03250at 765.824 kb on - strand, within CA264_03250at 765.830 kb on - strand, within CA264_03250at 765.924 kb on + strand, within CA264_03250at 765.924 kb on + strand, within CA264_03250at 765.979 kb on + strand, within CA264_03250at 765.980 kb on - strand, within CA264_03250at 765.998 kb on + strand, within CA264_03250at 766.095 kb on + strand, within CA264_03250at 766.095 kb on + strand, within CA264_03250at 766.095 kb on + strand, within CA264_03250at 766.125 kb on + strand, within CA264_03250at 766.129 kb on + strand, within CA264_03250at 766.129 kb on + strand, within CA264_03250at 766.130 kb on - strand, within CA264_03250at 766.130 kb on - strand, within CA264_03250at 766.164 kb on + strand, within CA264_03250at 766.165 kb on - strand, within CA264_03250at 766.165 kb on - strand, within CA264_03250at 766.225 kb on + strand, within CA264_03250at 766.299 kb on - strandat 766.304 kb on - strandat 766.340 kb on + strandat 766.389 kb on - strandat 766.392 kb on - strandat 766.635 kb on - strand, within CA264_03255at 766.879 kb on - strand, within CA264_03255at 766.920 kb on + strand, within CA264_03255at 766.920 kb on + strand, within CA264_03255at 766.920 kb on + strand, within CA264_03255at 766.920 kb on + strand, within CA264_03255at 766.921 kb on - strand, within CA264_03255at 766.921 kb on - strand, within CA264_03255at 766.921 kb on - strand, within CA264_03255at 766.921 kb on - strand, within CA264_03255at 766.981 kb on + strandat 767.012 kb on - strandat 767.012 kb on - strandat 767.032 kb on + strandat 767.032 kb on + strandat 767.032 kb on + strandat 767.033 kb on - strandat 767.033 kb on - strandat 767.085 kb on - strandat 767.132 kb on + strandat 767.140 kb on + strandat 767.141 kb on - strandat 767.167 kb on + strandat 767.167 kb on + strandat 767.167 kb on + strandat 767.206 kb on + strandat 767.207 kb on - strandat 767.221 kb on - strandat 767.232 kb on + strandat 767.249 kb on - strandat 767.249 kb on - strandat 767.249 kb on - strandat 767.362 kb on - strand, within CA264_03260at 767.424 kb on - strand, within CA264_03260at 767.431 kb on + strand, within CA264_03260at 767.436 kb on - strand, within CA264_03260at 767.436 kb on - strand, within CA264_03260at 767.436 kb on - strand, within CA264_03260at 767.592 kb on + strand, within CA264_03260at 767.623 kb on - strand, within CA264_03260at 767.729 kb on - strand, within CA264_03260at 767.729 kb on - strand, within CA264_03260at 767.731 kb on + strand, within CA264_03260at 767.732 kb on - strand, within CA264_03260at 767.803 kb on + strand, within CA264_03260at 767.803 kb on + strand, within CA264_03260at 767.804 kb on - strand, within CA264_03260at 767.804 kb on - strand, within CA264_03260at 767.856 kb on + strand, within CA264_03260at 767.857 kb on - strand, within CA264_03260at 767.857 kb on - strand, within CA264_03260at 767.991 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.0025 mg/ml
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765,726 + CA264_03250 0.47 -0.4
765,727 - CA264_03250 0.47 +0.2
765,727 - CA264_03250 0.47 +0.2
765,772 + CA264_03250 0.50 +2.5
765,772 + CA264_03250 0.50 +1.2
765,816 + CA264_03250 0.54 -0.2
765,816 + CA264_03250 0.54 +0.3
765,816 + CA264_03250 0.54 -0.6
765,817 - CA264_03250 0.54 +0.3
765,817 - CA264_03250 0.54 +0.0
765,817 - CA264_03250 0.54 +0.2
765,819 + CA264_03250 0.54 +1.7
765,820 - CA264_03250 0.54 +0.0
765,824 - CA264_03250 0.54 +0.1
765,830 - CA264_03250 0.55 +0.1
765,924 + CA264_03250 0.62 +0.4
765,924 + CA264_03250 0.62 +0.5
765,979 + CA264_03250 0.67 +1.2
765,980 - CA264_03250 0.67 +0.9
765,998 + CA264_03250 0.68 +0.9
766,095 + CA264_03250 0.76 +0.2
766,095 + CA264_03250 0.76 +0.1
766,095 + CA264_03250 0.76 +0.0
766,125 + CA264_03250 0.78 +1.2
766,129 + CA264_03250 0.78 -0.2
766,129 + CA264_03250 0.78 +0.4
766,130 - CA264_03250 0.78 -0.5
766,130 - CA264_03250 0.78 +1.7
766,164 + CA264_03250 0.81 -0.9
766,165 - CA264_03250 0.81 +0.3
766,165 - CA264_03250 0.81 +2.4
766,225 + CA264_03250 0.86 +0.6
766,299 - +0.8
766,304 - -1.3
766,340 + +1.8
766,389 - -1.1
766,392 - +0.0
766,635 - CA264_03255 0.16 +0.7
766,879 - CA264_03255 0.71 +1.2
766,920 + CA264_03255 0.81 +0.5
766,920 + CA264_03255 0.81 -1.3
766,920 + CA264_03255 0.81 -1.5
766,920 + CA264_03255 0.81 -0.0
766,921 - CA264_03255 0.81 +1.8
766,921 - CA264_03255 0.81 +0.3
766,921 - CA264_03255 0.81 +1.0
766,921 - CA264_03255 0.81 +0.9
766,981 + +0.9
767,012 - +1.3
767,012 - -2.1
767,032 + +0.2
767,032 + +0.3
767,032 + -0.2
767,033 - +1.0
767,033 - +1.4
767,085 - +1.0
767,132 + +0.6
767,140 + -0.8
767,141 - +0.6
767,167 + +0.6
767,167 + +2.6
767,167 + +0.0
767,206 + +0.5
767,207 - +1.0
767,221 - -0.5
767,232 + +0.4
767,249 - +0.1
767,249 - +0.0
767,249 - +1.2
767,362 - CA264_03260 0.20 +0.5
767,424 - CA264_03260 0.27 +0.7
767,431 + CA264_03260 0.28 -1.7
767,436 - CA264_03260 0.28 +0.3
767,436 - CA264_03260 0.28 +0.1
767,436 - CA264_03260 0.28 +0.4
767,592 + CA264_03260 0.47 +1.9
767,623 - CA264_03260 0.51 +0.3
767,729 - CA264_03260 0.63 +1.4
767,729 - CA264_03260 0.63 -0.3
767,731 + CA264_03260 0.63 +0.3
767,732 - CA264_03260 0.63 -1.6
767,803 + CA264_03260 0.72 +0.5
767,803 + CA264_03260 0.72 -0.2
767,804 - CA264_03260 0.72 -1.2
767,804 - CA264_03260 0.72 +0.6
767,856 + CA264_03260 0.78 +0.6
767,857 - CA264_03260 0.78 +0.7
767,857 - CA264_03260 0.78 +0.4
767,991 - +0.9

Or see this region's nucleotide sequence