Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_01605

Experiment: m.b. Thallium(I) acetate 0.0025 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_01600 and CA264_01605 are separated by 78 nucleotidesCA264_01605 and CA264_01610 are separated by 0 nucleotides CA264_01600: CA264_01600 - arginine decarboxylase, at 374,946 to 376,340 _01600 CA264_01605: CA264_01605 - arginase, at 376,419 to 377,390 _01605 CA264_01610: CA264_01610 - arginine--tRNA ligase, at 377,391 to 379,181 _01610 Position (kb) 376 377 378Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 375.677 kb on - strand, within CA264_01600at 376.114 kb on + strand, within CA264_01600at 376.373 kb on + strandat 376.373 kb on + strandat 376.374 kb on - strandat 376.499 kb on - strandat 376.505 kb on - strandat 376.567 kb on + strand, within CA264_01605at 376.568 kb on - strand, within CA264_01605at 376.572 kb on + strand, within CA264_01605at 376.574 kb on + strand, within CA264_01605at 376.575 kb on - strand, within CA264_01605at 376.619 kb on + strand, within CA264_01605at 376.622 kb on + strand, within CA264_01605at 376.622 kb on + strand, within CA264_01605at 376.622 kb on + strand, within CA264_01605at 376.622 kb on + strand, within CA264_01605at 376.658 kb on - strand, within CA264_01605at 376.679 kb on + strand, within CA264_01605at 376.679 kb on + strand, within CA264_01605at 376.680 kb on - strand, within CA264_01605at 376.680 kb on - strand, within CA264_01605at 376.809 kb on + strand, within CA264_01605at 376.809 kb on + strand, within CA264_01605at 376.864 kb on + strand, within CA264_01605at 376.941 kb on + strand, within CA264_01605at 376.977 kb on + strand, within CA264_01605at 376.977 kb on + strand, within CA264_01605at 377.018 kb on + strand, within CA264_01605at 377.018 kb on + strand, within CA264_01605at 377.049 kb on + strand, within CA264_01605at 377.059 kb on + strand, within CA264_01605at 377.123 kb on + strand, within CA264_01605at 377.123 kb on + strand, within CA264_01605at 377.124 kb on - strand, within CA264_01605at 377.124 kb on - strand, within CA264_01605at 377.127 kb on + strand, within CA264_01605at 377.127 kb on + strand, within CA264_01605at 377.128 kb on - strand, within CA264_01605at 377.263 kb on - strand, within CA264_01605at 377.263 kb on - strand, within CA264_01605at 377.328 kb on - strandat 377.370 kb on - strandat 377.388 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.0025 mg/ml
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375,677 - CA264_01600 0.52 +2.9
376,114 + CA264_01600 0.84 +3.3
376,373 + -1.3
376,373 + -0.8
376,374 - -0.4
376,499 - -1.7
376,505 - -1.5
376,567 + CA264_01605 0.15 -1.2
376,568 - CA264_01605 0.15 -1.5
376,572 + CA264_01605 0.16 -0.8
376,574 + CA264_01605 0.16 -0.9
376,575 - CA264_01605 0.16 -0.4
376,619 + CA264_01605 0.21 -1.5
376,622 + CA264_01605 0.21 -0.1
376,622 + CA264_01605 0.21 -2.7
376,622 + CA264_01605 0.21 -2.6
376,622 + CA264_01605 0.21 -0.8
376,658 - CA264_01605 0.25 -0.2
376,679 + CA264_01605 0.27 -0.3
376,679 + CA264_01605 0.27 +0.1
376,680 - CA264_01605 0.27 -1.8
376,680 - CA264_01605 0.27 -0.8
376,809 + CA264_01605 0.40 -1.7
376,809 + CA264_01605 0.40 -1.6
376,864 + CA264_01605 0.46 -0.6
376,941 + CA264_01605 0.54 -0.1
376,977 + CA264_01605 0.57 +1.1
376,977 + CA264_01605 0.57 -2.4
377,018 + CA264_01605 0.62 -0.4
377,018 + CA264_01605 0.62 +0.2
377,049 + CA264_01605 0.65 -2.5
377,059 + CA264_01605 0.66 +0.7
377,123 + CA264_01605 0.72 -1.6
377,123 + CA264_01605 0.72 -1.3
377,124 - CA264_01605 0.73 -3.7
377,124 - CA264_01605 0.73 -1.5
377,127 + CA264_01605 0.73 -1.1
377,127 + CA264_01605 0.73 -2.1
377,128 - CA264_01605 0.73 +0.0
377,263 - CA264_01605 0.87 +0.0
377,263 - CA264_01605 0.87 -1.7
377,328 - -1.3
377,370 - -0.1
377,388 + -0.7

Or see this region's nucleotide sequence