Strain Fitness in Rhizobium sp. OAE497 around ABIE40_RS13725

Experiment: L-Threonine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Threonine (C)
2,675,553	-		ABIE40_RS13715	0.69	-0.4
2,675,553	-		ABIE40_RS13715	0.69	+0.4
2,675,553	-		ABIE40_RS13715	0.69	-1.6
2,675,572	+		ABIE40_RS13715	0.72	-1.4
2,675,572	+		ABIE40_RS13715	0.72	-0.6
2,675,573	-		ABIE40_RS13715	0.72	-0.2
2,675,573	-		ABIE40_RS13715	0.72	+0.3
2,675,573	-		ABIE40_RS13715	0.72	-1.6
2,675,858	+		ABIE40_RS13720	0.11	-0.0
2,675,858	+		ABIE40_RS13720	0.11	-0.3
2,675,858	+		ABIE40_RS13720	0.11	-0.6
2,675,858	+		ABIE40_RS13720	0.11	-0.8
2,675,858	+		ABIE40_RS13720	0.11	+1.1
2,675,858	+		ABIE40_RS13720	0.11	+0.6
2,675,858	+		ABIE40_RS13720	0.11	+0.3
2,675,858	+		ABIE40_RS13720	0.11	+0.3
2,675,858	+		ABIE40_RS13720	0.11	-0.9
2,675,858	+		ABIE40_RS13720	0.11	-1.5
2,675,859	-		ABIE40_RS13720	0.12	-1.0
2,675,859	-		ABIE40_RS13720	0.12	-0.2
2,675,926	+		ABIE40_RS13720	0.20	-1.6
2,675,954	-		ABIE40_RS13720	0.24	-0.1
2,675,954	-		ABIE40_RS13720	0.24	+2.2
2,676,209	+		ABIE40_RS13720	0.56	-1.1
2,676,210	-		ABIE40_RS13720	0.56	-0.1
2,676,210	-		ABIE40_RS13720	0.56	-0.6
2,676,308	+		ABIE40_RS13720	0.68	-0.9
2,676,309	-		ABIE40_RS13720	0.69	-1.0
2,676,341	+		ABIE40_RS13720	0.73	-1.7
2,676,341	+		ABIE40_RS13720	0.73	-0.3
2,676,341	+		ABIE40_RS13720	0.73	+0.1
2,676,341	+		ABIE40_RS13720	0.73	+1.7
2,676,341	+		ABIE40_RS13720	0.73	+2.0
2,676,341	+		ABIE40_RS13720	0.73	+0.0
2,676,341	+		ABIE40_RS13720	0.73	-0.3
2,676,341	+		ABIE40_RS13720	0.73	-0.5
2,676,342	-		ABIE40_RS13720	0.73	-0.3
2,676,342	-		ABIE40_RS13720	0.73	+0.1
2,676,342	-		ABIE40_RS13720	0.73	-0.3
2,676,342	-		ABIE40_RS13720	0.73	-0.3
2,676,342	-		ABIE40_RS13720	0.73	-1.4
2,676,342	-		ABIE40_RS13720	0.73	-0.1
2,676,371	+		ABIE40_RS13720	0.76	-0.3
2,676,372	-		ABIE40_RS13720	0.77	-0.2
2,676,401	+		ABIE40_RS13720	0.80	+0.4
2,676,401	+		ABIE40_RS13720	0.80	-0.1
2,676,401	+		ABIE40_RS13720	0.80	+0.3
2,676,401	+		ABIE40_RS13720	0.80	-0.6
2,676,401	+		ABIE40_RS13720	0.80	-1.1
2,676,401	+		ABIE40_RS13720	0.80	+1.1
2,676,401	+		ABIE40_RS13720	0.80	-0.3
2,676,401	+		ABIE40_RS13720	0.80	-1.3
2,676,401	+		ABIE40_RS13720	0.80	-1.0
2,676,401	+		ABIE40_RS13720	0.80	+0.5
2,676,401	+		ABIE40_RS13720	0.80	-0.1
2,676,401	+		ABIE40_RS13720	0.80	-2.3
2,676,401	+		ABIE40_RS13720	0.80	+0.1
2,676,402	-		ABIE40_RS13720	0.80	+0.2
2,676,402	-		ABIE40_RS13720	0.80	-0.3
2,676,402	-		ABIE40_RS13720	0.80	-1.7
2,676,402	-		ABIE40_RS13720	0.80	+0.2
2,676,402	-		ABIE40_RS13720	0.80	+0.9
2,676,402	-		ABIE40_RS13720	0.80	+2.8
2,676,402	-		ABIE40_RS13720	0.80	-1.9
2,676,402	-		ABIE40_RS13720	0.80	-2.2
2,676,402	-		ABIE40_RS13720	0.80	-0.9
2,676,402	-		ABIE40_RS13720	0.80	-0.9
2,676,402	-		ABIE40_RS13720	0.80	-0.2
2,676,402	-		ABIE40_RS13720	0.80	-1.3
2,676,402	-		ABIE40_RS13720	0.80	+1.5
2,676,403	+		ABIE40_RS13720	0.80	+0.7
2,676,403	+		ABIE40_RS13720	0.80	-0.5
2,676,403	+		ABIE40_RS13720	0.80	+0.6
2,676,404	-		ABIE40_RS13720	0.81	-2.0
2,676,572	+				+0.2
2,676,607	-				+0.7
2,676,607	-				+1.0
2,676,609	-				+1.1
2,676,882	+		ABIE40_RS13725	0.43	+1.7
2,676,882	+		ABIE40_RS13725	0.43	-2.8
2,677,165	+		ABIE40_RS13725	0.80	-2.9
2,677,165	+		ABIE40_RS13725	0.80	-0.9
2,677,165	+		ABIE40_RS13725	0.80	-2.6
2,677,166	-		ABIE40_RS13725	0.80	-1.7
2,677,166	-		ABIE40_RS13725	0.80	+2.0
2,677,455	+		ABIE40_RS13730	0.13	-2.5
2,677,455	+		ABIE40_RS13730	0.13	+1.1
2,677,456	-		ABIE40_RS13730	0.13	-0.5
2,677,456	-		ABIE40_RS13730	0.13	+0.0
2,677,456	-		ABIE40_RS13730	0.13	+0.7
2,677,517	+		ABIE40_RS13730	0.19	+0.6
2,677,719	+		ABIE40_RS13730	0.39	-0.2
2,677,719	+		ABIE40_RS13730	0.39	-0.4
2,677,719	+		ABIE40_RS13730	0.39	+0.8
2,677,720	-		ABIE40_RS13730	0.40	+0.4
2,677,720	-		ABIE40_RS13730	0.40	-2.6
2,677,720	-		ABIE40_RS13730	0.40	-1.7
2,677,720	-		ABIE40_RS13730	0.40	-0.9
2,677,720	-		ABIE40_RS13730	0.40	-3.0
2,677,720	-		ABIE40_RS13730	0.40	+0.3
2,677,720	-		ABIE40_RS13730	0.40	+1.7
2,677,720	-		ABIE40_RS13730	0.40	+0.3
2,677,720	-		ABIE40_RS13730	0.40	+0.4
2,677,825	-		ABIE40_RS13730	0.50	-0.2
2,677,869	+		ABIE40_RS13730	0.54	-1.9
2,677,869	+		ABIE40_RS13730	0.54	-0.7
2,677,869	+		ABIE40_RS13730	0.54	-2.7
2,677,870	-		ABIE40_RS13730	0.54	+0.2
2,677,870	-		ABIE40_RS13730	0.54	+0.9
2,677,870	-		ABIE40_RS13730	0.54	+0.9
2,677,870	-		ABIE40_RS13730	0.54	+0.5
2,677,870	-		ABIE40_RS13730	0.54	+0.1
2,677,870	-		ABIE40_RS13730	0.54	+1.0
2,677,871	+		ABIE40_RS13730	0.55	-0.8
2,677,871	+		ABIE40_RS13730	0.55	+1.1
2,677,872	-		ABIE40_RS13730	0.55	-1.9
2,677,872	-		ABIE40_RS13730	0.55	+2.1
2,677,872	-		ABIE40_RS13730	0.55	-0.9
2,677,872	-		ABIE40_RS13730	0.55	+0.3
2,677,872	-		ABIE40_RS13730	0.55	-1.4
2,677,872	-		ABIE40_RS13730	0.55	-0.6
2,677,926	+		ABIE40_RS13730	0.60	+0.0
2,677,927	-		ABIE40_RS13730	0.60	+1.5
2,677,935	+		ABIE40_RS13730	0.61	+0.3
2,677,983	+		ABIE40_RS13730	0.66	+1.5
2,677,984	-		ABIE40_RS13730	0.66	+2.1
2,677,984	-		ABIE40_RS13730	0.66	+0.5
2,677,984	-		ABIE40_RS13730	0.66	+2.5
2,677,984	-		ABIE40_RS13730	0.66	+1.1
2,677,984	-		ABIE40_RS13730	0.66	+0.2
2,678,040	+		ABIE40_RS13730	0.71	-0.8
2,678,040	+		ABIE40_RS13730	0.71	-1.7
2,678,040	+		ABIE40_RS13730	0.71	-0.1
2,678,160	+		ABIE40_RS13730	0.83	-1.0
2,678,160	+		ABIE40_RS13730	0.83	+0.9
2,678,161	-		ABIE40_RS13730	0.83	-1.0
2,678,161	-		ABIE40_RS13730	0.83	-0.7
2,678,161	-		ABIE40_RS13730	0.83	+0.3
2,678,164	+		ABIE40_RS13730	0.83	+0.6
2,678,164	+		ABIE40_RS13730	0.83	+0.7
2,678,164	+		ABIE40_RS13730	0.83	-0.6
2,678,164	+		ABIE40_RS13730	0.83	-1.1
2,678,164	+		ABIE40_RS13730	0.83	-0.4
2,678,164	+		ABIE40_RS13730	0.83	-0.4
2,678,164	+		ABIE40_RS13730	0.83	+0.4
2,678,165	-		ABIE40_RS13730	0.84	-0.5
2,678,226	+		ABIE40_RS13730	0.90	+0.1
2,678,226	+		ABIE40_RS13730	0.90	-1.2
2,678,226	+		ABIE40_RS13730	0.90	-0.5
2,678,227	-		ABIE40_RS13730	0.90	-1.7