Strain Fitness in Escherichia coli BW25113 around b1706

Experiment: casaminos (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	casaminos (C)
1,786,897	-	aroH	b1704	0.42	-2.3
1,787,055	-	aroH	b1704	0.57	-2.0
1,787,210	-	aroH	b1704	0.72	-2.3
1,787,217	-	aroH	b1704	0.72	-3.3
1,787,434	-				-3.2
1,788,003	+	ydiU	b1706	0.12	+0.8
1,788,003	+	ydiU	b1706	0.12	-0.1
1,788,058	-	ydiU	b1706	0.16	+1.0
1,788,058	-	ydiU	b1706	0.16	-0.8
1,788,158	-	ydiU	b1706	0.23	-0.3
1,788,163	-	ydiU	b1706	0.23	+0.2
1,788,163	-	ydiU	b1706	0.23	-0.1
1,788,521	-	ydiU	b1706	0.48	+0.7
1,788,521	-	ydiU	b1706	0.48	+0.4
1,788,760	+	ydiU	b1706	0.65	+0.3
1,788,775	-	ydiU	b1706	0.66	+0.2
1,788,775	-	ydiU	b1706	0.66	+0.1
1,788,841	+	ydiU	b1706	0.70	-0.1
1,788,938	+	ydiU	b1706	0.77	-0.7
1,788,961	-	ydiU	b1706	0.79	-0.1
1,789,181	+				+1.1
1,789,313	-				-0.0
1,789,313	-				-0.4
1,789,329	+				+0.9
1,789,329	+				+0.2
1,789,382	-				-0.4
1,789,385	+				-0.2
1,789,385	+				-1.2
1,789,393	-				-1.2
1,789,393	-				-1.3
1,789,395	-				+0.1
1,789,410	+	ydiV	b1707	0.11	+0.3
1,789,515	-	ydiV	b1707	0.26	+0.5
1,789,515	-	ydiV	b1707	0.26	-0.2
1,789,554	+	ydiV	b1707	0.31	+1.1
1,789,562	-	ydiV	b1707	0.32	+0.7
1,789,591	+	ydiV	b1707	0.36	+0.7
1,789,596	+	ydiV	b1707	0.37	+0.3
1,789,596	+	ydiV	b1707	0.37	-0.5
1,789,604	-	ydiV	b1707	0.38	-0.8
1,789,624	+	ydiV	b1707	0.41	+0.4
1,789,624	+	ydiV	b1707	0.41	-0.3
1,789,631	+	ydiV	b1707	0.42	+0.1
1,789,632	+	ydiV	b1707	0.42	-0.2
1,789,632	-	ydiV	b1707	0.42	-0.6
1,789,632	-	ydiV	b1707	0.42	-0.6
1,789,649	+	ydiV	b1707	0.45	-0.3
1,789,701	+	ydiV	b1707	0.52	-0.5
1,789,890	-	ydiV	b1707	0.78	+0.2
1,789,892	-	ydiV	b1707	0.79	-0.9
1,789,902	-	ydiV	b1707	0.80	-1.1
1,789,934	-	ydiV	b1707	0.84	+0.1
1,789,970	-	ydiV	b1707	0.89	-0.5
1,789,970	-	ydiV	b1707	0.89	+0.4
1,790,042	+				+0.3
1,790,105	-				+0.2
1,790,113	-				-0.6
1,790,113	-				-0.2
1,790,120	-				-0.5
1,790,130	+				-0.2