Strain Fitness in Escherichia coli BW25113 around b0755

Experiment: casaminos (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntaroG and gpmA are separated by 157 nucleotidesgpmA and galM are separated by 201 nucleotides b0754: aroG - 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, phenylalanine repressible (NCBI), at 784,856 to 785,908 aroG b0755: gpmA - phosphoglyceromutase (NCBI), at 786,066 to 786,818 gpmA b0756: galM - galactose-1-epimerase (mutarotase) (NCBI), at 787,020 to 788,060 galM Position (kb) 786 787Strain fitness (log2 ratio) -2 -1 0 1at 785.161 kb on + strand, within aroGat 785.184 kb on - strand, within aroGat 785.217 kb on - strand, within aroGat 785.301 kb on + strand, within aroGat 785.497 kb on - strand, within aroGat 785.570 kb on - strand, within aroGat 785.604 kb on + strand, within aroGat 785.604 kb on + strand, within aroGat 785.612 kb on - strand, within aroGat 785.646 kb on - strand, within aroGat 785.936 kb on - strandat 785.936 kb on - strandat 785.959 kb on - strandat 785.959 kb on - strandat 785.961 kb on + strandat 785.961 kb on + strandat 786.220 kb on + strand, within gpmAat 786.277 kb on - strand, within gpmAat 786.348 kb on + strand, within gpmAat 786.350 kb on - strand, within gpmAat 786.426 kb on - strand, within gpmAat 786.426 kb on - strand, within gpmAat 786.451 kb on - strand, within gpmAat 786.477 kb on + strand, within gpmAat 786.530 kb on - strand, within gpmAat 786.531 kb on + strand, within gpmAat 786.597 kb on - strand, within gpmAat 786.597 kb on - strand, within gpmAat 786.629 kb on - strand, within gpmAat 786.666 kb on + strand, within gpmAat 786.814 kb on + strandat 786.814 kb on + strandat 786.814 kb on + strandat 786.814 kb on + strandat 786.814 kb on + strandat 786.828 kb on - strandat 786.905 kb on + strandat 786.932 kb on - strandat 786.932 kb on - strandat 787.025 kb on - strandat 787.043 kb on - strandat 787.080 kb on - strandat 787.087 kb on + strandat 787.091 kb on - strandat 787.106 kb on + strandat 787.172 kb on - strand, within galMat 787.307 kb on - strand, within galMat 787.308 kb on - strand, within galMat 787.414 kb on - strand, within galMat 787.510 kb on - strand, within galMat 787.569 kb on - strand, within galMat 787.749 kb on + strand, within galM

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Per-strain Table

Position Strand Gene LocusTag Fraction casaminos (C)
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785,161 + aroG b0754 0.29 +0.4
785,184 - aroG b0754 0.31 +1.3
785,217 - aroG b0754 0.34 -0.7
785,301 + aroG b0754 0.42 +0.7
785,497 - aroG b0754 0.61 -0.2
785,570 - aroG b0754 0.68 +0.1
785,604 + aroG b0754 0.71 +0.2
785,604 + aroG b0754 0.71 +0.6
785,612 - aroG b0754 0.72 +0.5
785,646 - aroG b0754 0.75 +0.4
785,936 - -0.1
785,936 - -1.8
785,959 - +0.1
785,959 - +0.0
785,961 + +0.5
785,961 + -0.3
786,220 + gpmA b0755 0.20 +0.3
786,277 - gpmA b0755 0.28 +0.4
786,348 + gpmA b0755 0.37 +0.3
786,350 - gpmA b0755 0.38 +0.2
786,426 - gpmA b0755 0.48 +1.1
786,426 - gpmA b0755 0.48 +0.8
786,451 - gpmA b0755 0.51 +0.5
786,477 + gpmA b0755 0.55 -1.8
786,530 - gpmA b0755 0.62 +0.1
786,531 + gpmA b0755 0.62 +0.1
786,597 - gpmA b0755 0.71 -0.5
786,597 - gpmA b0755 0.71 +0.5
786,629 - gpmA b0755 0.75 +0.6
786,666 + gpmA b0755 0.80 -0.5
786,814 + -2.0
786,814 + -0.5
786,814 + +0.3
786,814 + -0.4
786,814 + -0.5
786,828 - +1.6
786,905 + -0.4
786,932 - -0.1
786,932 - -0.2
787,025 - +1.1
787,043 - +0.9
787,080 - +0.5
787,087 + +0.0
787,091 - -0.3
787,106 + -0.1
787,172 - galM b0756 0.15 +0.9
787,307 - galM b0756 0.28 +0.0
787,308 - galM b0756 0.28 +0.2
787,414 - galM b0756 0.38 -0.7
787,510 - galM b0756 0.47 +0.2
787,569 - galM b0756 0.53 -0.1
787,749 + galM b0756 0.70 -1.8

Or see this region's nucleotide sequence