Strain Fitness in Serratia liquefaciens MT49 around IAI46_24145

Experiment: Uranyl Acetate Dihydrate 200 uM, aerobic

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntIAI46_24140 and IAI46_24145 are separated by 312 nucleotidesIAI46_24145 and IAI46_24150 are separated by 301 nucleotides IAI46_24140: IAI46_24140 - DUF1852 family protein, at 5,143,747 to 5,144,586 _24140 IAI46_24145: IAI46_24145 - NAD(P)/FAD-dependent oxidoreductase, at 5,144,899 to 5,146,098 _24145 IAI46_24150: IAI46_24150 - inorganic phosphate transporter PitA, at 5,146,400 to 5,147,902 _24150 Position (kb) 5144 5145 5146 5147Strain fitness (log2 ratio) -2 -1 0 1 2at 5143.991 kb on + strand, within IAI46_24140at 5144.007 kb on - strand, within IAI46_24140at 5144.060 kb on + strand, within IAI46_24140at 5144.060 kb on + strand, within IAI46_24140at 5144.060 kb on + strand, within IAI46_24140at 5144.060 kb on + strand, within IAI46_24140at 5144.060 kb on + strand, within IAI46_24140at 5144.060 kb on + strand, within IAI46_24140at 5144.060 kb on + strand, within IAI46_24140at 5144.061 kb on - strand, within IAI46_24140at 5144.061 kb on - strand, within IAI46_24140at 5144.061 kb on - strand, within IAI46_24140at 5144.064 kb on + strand, within IAI46_24140at 5144.064 kb on + strand, within IAI46_24140at 5144.064 kb on + strand, within IAI46_24140at 5144.064 kb on + strand, within IAI46_24140at 5144.065 kb on - strand, within IAI46_24140at 5144.065 kb on - strand, within IAI46_24140at 5144.065 kb on - strand, within IAI46_24140at 5144.070 kb on + strand, within IAI46_24140at 5144.070 kb on + strand, within IAI46_24140at 5144.071 kb on - strand, within IAI46_24140at 5144.071 kb on - strand, within IAI46_24140at 5144.121 kb on - strand, within IAI46_24140at 5144.202 kb on + strand, within IAI46_24140at 5144.202 kb on + strand, within IAI46_24140at 5144.202 kb on + strand, within IAI46_24140at 5144.203 kb on - strand, within IAI46_24140at 5144.203 kb on - strand, within IAI46_24140at 5144.232 kb on - strand, within IAI46_24140at 5144.313 kb on - strand, within IAI46_24140at 5144.321 kb on - strand, within IAI46_24140at 5144.321 kb on - strand, within IAI46_24140at 5144.408 kb on + strand, within IAI46_24140at 5144.409 kb on - strand, within IAI46_24140at 5144.487 kb on + strand, within IAI46_24140at 5144.488 kb on - strand, within IAI46_24140at 5144.553 kb on + strandat 5144.554 kb on - strandat 5144.554 kb on - strandat 5144.554 kb on - strandat 5144.554 kb on - strandat 5144.558 kb on - strandat 5144.558 kb on - strandat 5144.558 kb on - strandat 5144.589 kb on + strandat 5144.590 kb on - strandat 5144.621 kb on - strandat 5144.783 kb on - strandat 5144.824 kb on - strandat 5144.837 kb on - strandat 5144.880 kb on + strandat 5144.880 kb on + strandat 5144.881 kb on - strandat 5144.900 kb on + strandat 5144.964 kb on + strandat 5144.964 kb on + strandat 5144.964 kb on + strandat 5144.965 kb on - strandat 5144.965 kb on - strandat 5144.966 kb on + strandat 5145.006 kb on + strandat 5145.006 kb on + strandat 5145.121 kb on + strand, within IAI46_24145at 5145.122 kb on - strand, within IAI46_24145at 5145.122 kb on - strand, within IAI46_24145at 5145.122 kb on - strand, within IAI46_24145at 5145.181 kb on + strand, within IAI46_24145at 5145.181 kb on + strand, within IAI46_24145at 5145.182 kb on - strand, within IAI46_24145at 5145.182 kb on - strand, within IAI46_24145at 5145.182 kb on - strand, within IAI46_24145at 5145.182 kb on - strand, within IAI46_24145at 5145.362 kb on + strand, within IAI46_24145at 5145.415 kb on + strand, within IAI46_24145at 5145.415 kb on + strand, within IAI46_24145at 5145.416 kb on - strand, within IAI46_24145at 5145.507 kb on + strand, within IAI46_24145at 5145.508 kb on - strand, within IAI46_24145at 5145.516 kb on + strand, within IAI46_24145at 5145.548 kb on - strand, within IAI46_24145at 5145.576 kb on + strand, within IAI46_24145at 5145.577 kb on - strand, within IAI46_24145at 5145.577 kb on - strand, within IAI46_24145at 5145.579 kb on - strand, within IAI46_24145at 5145.869 kb on + strand, within IAI46_24145at 5145.914 kb on + strand, within IAI46_24145at 5145.915 kb on - strand, within IAI46_24145at 5145.932 kb on + strand, within IAI46_24145at 5145.932 kb on + strand, within IAI46_24145at 5145.932 kb on + strand, within IAI46_24145at 5145.933 kb on - strand, within IAI46_24145at 5145.933 kb on - strand, within IAI46_24145at 5146.072 kb on + strandat 5146.073 kb on - strandat 5146.073 kb on - strandat 5146.073 kb on - strandat 5146.075 kb on + strandat 5146.076 kb on - strandat 5146.195 kb on + strandat 5146.221 kb on - strandat 5146.224 kb on - strandat 5146.392 kb on + strandat 5146.620 kb on - strand, within IAI46_24150at 5146.737 kb on - strand, within IAI46_24150at 5146.783 kb on + strand, within IAI46_24150at 5146.862 kb on - strand, within IAI46_24150at 5146.966 kb on + strand, within IAI46_24150

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Per-strain Table

Position Strand Gene LocusTag Fraction Uranyl Acetate Dihydrate 200 uM, aerobic
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5,143,991 + IAI46_24140 0.29 +0.5
5,144,007 - IAI46_24140 0.31 +0.2
5,144,060 + IAI46_24140 0.37 +0.3
5,144,060 + IAI46_24140 0.37 +0.1
5,144,060 + IAI46_24140 0.37 +0.8
5,144,060 + IAI46_24140 0.37 +0.9
5,144,060 + IAI46_24140 0.37 -0.4
5,144,060 + IAI46_24140 0.37 +0.7
5,144,060 + IAI46_24140 0.37 +0.9
5,144,061 - IAI46_24140 0.37 -1.3
5,144,061 - IAI46_24140 0.37 +0.4
5,144,061 - IAI46_24140 0.37 +1.3
5,144,064 + IAI46_24140 0.38 +0.5
5,144,064 + IAI46_24140 0.38 -1.8
5,144,064 + IAI46_24140 0.38 +0.7
5,144,064 + IAI46_24140 0.38 -0.2
5,144,065 - IAI46_24140 0.38 -0.1
5,144,065 - IAI46_24140 0.38 +0.2
5,144,065 - IAI46_24140 0.38 +1.0
5,144,070 + IAI46_24140 0.38 -0.4
5,144,070 + IAI46_24140 0.38 +0.3
5,144,071 - IAI46_24140 0.39 +0.4
5,144,071 - IAI46_24140 0.39 +0.4
5,144,121 - IAI46_24140 0.45 +0.0
5,144,202 + IAI46_24140 0.54 +0.6
5,144,202 + IAI46_24140 0.54 +0.5
5,144,202 + IAI46_24140 0.54 +0.4
5,144,203 - IAI46_24140 0.54 +0.9
5,144,203 - IAI46_24140 0.54 -0.3
5,144,232 - IAI46_24140 0.58 +0.4
5,144,313 - IAI46_24140 0.67 +0.2
5,144,321 - IAI46_24140 0.68 +0.1
5,144,321 - IAI46_24140 0.68 -0.6
5,144,408 + IAI46_24140 0.79 -0.0
5,144,409 - IAI46_24140 0.79 +0.1
5,144,487 + IAI46_24140 0.88 -0.1
5,144,488 - IAI46_24140 0.88 -0.5
5,144,553 + +2.7
5,144,554 - +0.1
5,144,554 - +0.5
5,144,554 - +0.6
5,144,554 - +1.0
5,144,558 - +1.6
5,144,558 - +0.8
5,144,558 - +0.4
5,144,589 + -0.6
5,144,590 - +1.5
5,144,621 - +0.3
5,144,783 - -0.7
5,144,824 - -0.2
5,144,837 - -0.4
5,144,880 + +0.2
5,144,880 + +0.2
5,144,881 - -0.0
5,144,900 + -1.0
5,144,964 + -0.2
5,144,964 + +0.3
5,144,964 + +0.2
5,144,965 - +1.1
5,144,965 - +0.8
5,144,966 + +0.5
5,145,006 + +1.1
5,145,006 + +0.1
5,145,121 + IAI46_24145 0.18 +1.0
5,145,122 - IAI46_24145 0.19 +2.4
5,145,122 - IAI46_24145 0.19 -0.1
5,145,122 - IAI46_24145 0.19 -0.0
5,145,181 + IAI46_24145 0.23 +0.3
5,145,181 + IAI46_24145 0.23 +1.2
5,145,182 - IAI46_24145 0.24 +0.7
5,145,182 - IAI46_24145 0.24 -0.4
5,145,182 - IAI46_24145 0.24 -0.7
5,145,182 - IAI46_24145 0.24 -0.1
5,145,362 + IAI46_24145 0.39 -2.2
5,145,415 + IAI46_24145 0.43 +1.0
5,145,415 + IAI46_24145 0.43 +1.1
5,145,416 - IAI46_24145 0.43 +0.4
5,145,507 + IAI46_24145 0.51 +0.1
5,145,508 - IAI46_24145 0.51 -1.7
5,145,516 + IAI46_24145 0.51 +0.3
5,145,548 - IAI46_24145 0.54 +0.0
5,145,576 + IAI46_24145 0.56 -0.3
5,145,577 - IAI46_24145 0.56 -0.4
5,145,577 - IAI46_24145 0.56 -0.9
5,145,579 - IAI46_24145 0.57 +0.9
5,145,869 + IAI46_24145 0.81 +0.0
5,145,914 + IAI46_24145 0.85 -1.0
5,145,915 - IAI46_24145 0.85 +0.0
5,145,932 + IAI46_24145 0.86 +0.6
5,145,932 + IAI46_24145 0.86 -0.1
5,145,932 + IAI46_24145 0.86 +0.1
5,145,933 - IAI46_24145 0.86 +0.0
5,145,933 - IAI46_24145 0.86 -0.3
5,146,072 + -0.2
5,146,073 - +0.4
5,146,073 - -0.2
5,146,073 - +0.4
5,146,075 + +0.6
5,146,076 - -0.9
5,146,195 + -0.5
5,146,221 - +1.9
5,146,224 - +0.3
5,146,392 + +0.4
5,146,620 - IAI46_24150 0.15 +0.5
5,146,737 - IAI46_24150 0.22 +0.1
5,146,783 + IAI46_24150 0.25 -0.3
5,146,862 - IAI46_24150 0.31 +1.4
5,146,966 + IAI46_24150 0.38 +0.4

Or see this region's nucleotide sequence