Experiment: Uranyl Acetate Dihydrate 200 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_22125 and IAI46_22130 are separated by 48 nucleotides IAI46_22130 and IAI46_22135 are separated by 19 nucleotides IAI46_22135 and IAI46_22140 are separated by 148 nucleotides IAI46_22140 and IAI46_22145 are separated by 73 nucleotides
IAI46_22125: IAI46_22125 - RNA polymerase sigma factor RpoD, at 4,714,122 to 4,715,957
_22125
IAI46_22130: IAI46_22130 - nuclear transport factor 2 family protein, at 4,716,006 to 4,716,458
_22130
IAI46_22135: IAI46_22135 - G/U mismatch-specific DNA glycosylase, at 4,716,478 to 4,716,966
_22135
IAI46_22140: IAI46_22140 - tRNA-Ile, at 4,717,115 to 4,717,191
_22140
IAI46_22145: IAI46_22145 - HPP family protein, at 4,717,265 to 4,717,981
_22145
Position (kb)
4716
4717 Strain fitness (log2 ratio)
-2
-1
0
1 at 4715.955 kb on + strand at 4715.955 kb on + strand at 4715.956 kb on - strand at 4715.956 kb on - strand at 4715.956 kb on - strand at 4716.148 kb on - strand, within IAI46_22130 at 4716.148 kb on - strand, within IAI46_22130 at 4716.163 kb on + strand, within IAI46_22130 at 4716.163 kb on + strand, within IAI46_22130 at 4716.163 kb on + strand, within IAI46_22130 at 4716.164 kb on - strand, within IAI46_22130 at 4716.164 kb on - strand, within IAI46_22130 at 4716.164 kb on - strand, within IAI46_22130 at 4716.286 kb on + strand, within IAI46_22130 at 4716.287 kb on - strand, within IAI46_22130 at 4716.323 kb on - strand, within IAI46_22130 at 4716.329 kb on + strand, within IAI46_22130 at 4716.330 kb on - strand, within IAI46_22130 at 4716.330 kb on - strand, within IAI46_22130 at 4716.333 kb on + strand, within IAI46_22130 at 4716.334 kb on - strand, within IAI46_22130 at 4716.347 kb on - strand, within IAI46_22130 at 4716.444 kb on - strand at 4716.516 kb on + strand at 4716.516 kb on + strand at 4716.803 kb on - strand, within IAI46_22135 at 4716.967 kb on - strand at 4716.995 kb on + strand at 4716.995 kb on + strand at 4717.022 kb on + strand at 4717.027 kb on - strand at 4717.027 kb on - strand at 4717.036 kb on + strand at 4717.059 kb on + strand at 4717.060 kb on - strand at 4717.060 kb on - strand at 4717.060 kb on - strand at 4717.060 kb on - strand at 4717.060 kb on - strand at 4717.069 kb on + strand at 4717.070 kb on - strand at 4717.070 kb on - strand at 4717.070 kb on - strand at 4717.229 kb on + strand at 4717.229 kb on + strand at 4717.393 kb on + strand, within IAI46_22145 at 4717.394 kb on - strand, within IAI46_22145 at 4717.502 kb on + strand, within IAI46_22145 at 4717.503 kb on - strand, within IAI46_22145 at 4717.503 kb on - strand, within IAI46_22145 at 4717.503 kb on - strand, within IAI46_22145 at 4717.503 kb on - strand, within IAI46_22145 at 4717.540 kb on + strand, within IAI46_22145 at 4717.540 kb on + strand, within IAI46_22145 at 4717.540 kb on + strand, within IAI46_22145 at 4717.541 kb on - strand, within IAI46_22145 at 4717.541 kb on - strand, within IAI46_22145 at 4717.541 kb on - strand, within IAI46_22145 at 4717.559 kb on - strand, within IAI46_22145 at 4717.624 kb on + strand, within IAI46_22145 at 4717.624 kb on + strand, within IAI46_22145 at 4717.723 kb on + strand, within IAI46_22145 at 4717.723 kb on + strand, within IAI46_22145 at 4717.723 kb on + strand, within IAI46_22145 at 4717.724 kb on - strand, within IAI46_22145 at 4717.724 kb on - strand, within IAI46_22145 at 4717.724 kb on - strand, within IAI46_22145 at 4717.784 kb on + strand, within IAI46_22145 at 4717.784 kb on + strand, within IAI46_22145 at 4717.810 kb on + strand, within IAI46_22145 at 4717.811 kb on - strand, within IAI46_22145 at 4717.824 kb on - strand, within IAI46_22145
Per-strain Table
Position Strand Gene LocusTag Fraction Uranyl Acetate Dihydrate 200 uM, aerobic remove 4,715,955 + +0.7 4,715,955 + -0.0 4,715,956 - -0.3 4,715,956 - -1.2 4,715,956 - -1.3 4,716,148 - IAI46_22130 0.31 -2.3 4,716,148 - IAI46_22130 0.31 +0.2 4,716,163 + IAI46_22130 0.35 +0.8 4,716,163 + IAI46_22130 0.35 +0.4 4,716,163 + IAI46_22130 0.35 +1.5 4,716,164 - IAI46_22130 0.35 -0.9 4,716,164 - IAI46_22130 0.35 -0.5 4,716,164 - IAI46_22130 0.35 +0.2 4,716,286 + IAI46_22130 0.62 +0.4 4,716,287 - IAI46_22130 0.62 -1.0 4,716,323 - IAI46_22130 0.70 -0.6 4,716,329 + IAI46_22130 0.71 -0.3 4,716,330 - IAI46_22130 0.72 +1.0 4,716,330 - IAI46_22130 0.72 -0.2 4,716,333 + IAI46_22130 0.72 -0.5 4,716,334 - IAI46_22130 0.72 +0.9 4,716,347 - IAI46_22130 0.75 -0.0 4,716,444 - +0.8 4,716,516 + +0.1 4,716,516 + -2.3 4,716,803 - IAI46_22135 0.66 +0.8 4,716,967 - -1.4 4,716,995 + +0.2 4,716,995 + +0.7 4,717,022 + +0.5 4,717,027 - -0.7 4,717,027 - -0.1 4,717,036 + +0.2 4,717,059 + -0.3 4,717,060 - -0.3 4,717,060 - +0.5 4,717,060 - +0.1 4,717,060 - -0.5 4,717,060 - +0.4 4,717,069 + -0.0 4,717,070 - -1.4 4,717,070 - -0.1 4,717,070 - +0.3 4,717,229 + +0.0 4,717,229 + -0.7 4,717,393 + IAI46_22145 0.18 -0.6 4,717,394 - IAI46_22145 0.18 -0.0 4,717,502 + IAI46_22145 0.33 +0.1 4,717,503 - IAI46_22145 0.33 -0.3 4,717,503 - IAI46_22145 0.33 +0.1 4,717,503 - IAI46_22145 0.33 +0.1 4,717,503 - IAI46_22145 0.33 +0.1 4,717,540 + IAI46_22145 0.38 -0.0 4,717,540 + IAI46_22145 0.38 -0.2 4,717,540 + IAI46_22145 0.38 -0.2 4,717,541 - IAI46_22145 0.38 +0.2 4,717,541 - IAI46_22145 0.38 +0.4 4,717,541 - IAI46_22145 0.38 -0.5 4,717,559 - IAI46_22145 0.41 +1.1 4,717,624 + IAI46_22145 0.50 +1.4 4,717,624 + IAI46_22145 0.50 -0.9 4,717,723 + IAI46_22145 0.64 -0.4 4,717,723 + IAI46_22145 0.64 -0.7 4,717,723 + IAI46_22145 0.64 +0.4 4,717,724 - IAI46_22145 0.64 +0.2 4,717,724 - IAI46_22145 0.64 -0.8 4,717,724 - IAI46_22145 0.64 -0.4 4,717,784 + IAI46_22145 0.72 +0.8 4,717,784 + IAI46_22145 0.72 -1.7 4,717,810 + IAI46_22145 0.76 -0.4 4,717,811 - IAI46_22145 0.76 +0.2 4,717,824 - IAI46_22145 0.78 -1.3
Or see this region's nucleotide sequence