Strain Fitness in Serratia liquefaciens MT49 around IAI46_17805

Experiment: Uranyl Acetate Dihydrate 200 uM, aerobic

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntIAI46_17800 and IAI46_17805 are separated by 302 nucleotidesIAI46_17805 and IAI46_17810 are separated by 131 nucleotides IAI46_17800: IAI46_17800 - histidine ABC transporter substrate-binding protein HisJ, at 3,751,175 to 3,751,957 _17800 IAI46_17805: IAI46_17805 - UbiX family flavin prenyltransferase, at 3,752,260 to 3,752,832 _17805 IAI46_17810: IAI46_17810 - amidophosphoribosyltransferase, at 3,752,964 to 3,754,481 _17810 Position (kb) 3752 3753Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 3751.313 kb on + strand, within IAI46_17800at 3751.359 kb on + strand, within IAI46_17800at 3751.360 kb on - strand, within IAI46_17800at 3751.453 kb on - strand, within IAI46_17800at 3751.518 kb on + strand, within IAI46_17800at 3751.518 kb on + strand, within IAI46_17800at 3751.518 kb on + strand, within IAI46_17800at 3751.579 kb on + strand, within IAI46_17800at 3751.629 kb on + strand, within IAI46_17800at 3751.629 kb on + strand, within IAI46_17800at 3751.630 kb on - strand, within IAI46_17800at 3751.756 kb on + strand, within IAI46_17800at 3751.757 kb on - strand, within IAI46_17800at 3751.769 kb on + strand, within IAI46_17800at 3751.799 kb on + strand, within IAI46_17800at 3751.851 kb on + strand, within IAI46_17800at 3751.851 kb on + strand, within IAI46_17800at 3751.851 kb on + strand, within IAI46_17800at 3751.851 kb on + strand, within IAI46_17800at 3751.852 kb on - strand, within IAI46_17800at 3751.852 kb on - strand, within IAI46_17800at 3751.852 kb on - strand, within IAI46_17800at 3751.852 kb on - strand, within IAI46_17800at 3751.852 kb on - strand, within IAI46_17800at 3751.852 kb on - strand, within IAI46_17800at 3751.852 kb on - strand, within IAI46_17800at 3751.864 kb on + strand, within IAI46_17800at 3751.864 kb on + strand, within IAI46_17800at 3751.865 kb on - strand, within IAI46_17800at 3751.865 kb on - strand, within IAI46_17800at 3751.868 kb on + strand, within IAI46_17800at 3751.917 kb on - strandat 3751.928 kb on + strandat 3751.929 kb on - strandat 3751.929 kb on - strandat 3751.942 kb on + strandat 3752.049 kb on + strandat 3752.050 kb on - strandat 3752.193 kb on + strandat 3752.193 kb on + strandat 3752.194 kb on - strandat 3752.194 kb on - strandat 3752.833 kb on - strandat 3752.891 kb on - strandat 3752.893 kb on - strandat 3752.893 kb on - strandat 3752.895 kb on - strandat 3752.895 kb on - strandat 3752.895 kb on - strandat 3752.895 kb on - strandat 3752.895 kb on - strandat 3752.895 kb on - strandat 3752.914 kb on - strandat 3753.085 kb on + strandat 3753.085 kb on + strandat 3753.086 kb on - strandat 3753.086 kb on - strandat 3753.086 kb on - strandat 3753.086 kb on - strandat 3753.086 kb on - strandat 3753.089 kb on + strandat 3753.090 kb on - strandat 3753.090 kb on - strandat 3753.090 kb on - strandat 3753.090 kb on - strandat 3753.099 kb on + strandat 3753.265 kb on + strand, within IAI46_17810at 3753.308 kb on - strand, within IAI46_17810at 3753.442 kb on - strand, within IAI46_17810at 3753.482 kb on + strand, within IAI46_17810at 3753.521 kb on - strand, within IAI46_17810at 3753.536 kb on + strand, within IAI46_17810at 3753.557 kb on + strand, within IAI46_17810at 3753.664 kb on + strand, within IAI46_17810at 3753.713 kb on - strand, within IAI46_17810at 3753.787 kb on + strand, within IAI46_17810at 3753.787 kb on + strand, within IAI46_17810at 3753.787 kb on + strand, within IAI46_17810at 3753.787 kb on + strand, within IAI46_17810at 3753.787 kb on + strand, within IAI46_17810at 3753.788 kb on - strand, within IAI46_17810

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Per-strain Table

Position Strand Gene LocusTag Fraction Uranyl Acetate Dihydrate 200 uM, aerobic
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3,751,313 + IAI46_17800 0.18 +0.2
3,751,359 + IAI46_17800 0.23 -0.6
3,751,360 - IAI46_17800 0.24 +0.7
3,751,453 - IAI46_17800 0.36 +2.1
3,751,518 + IAI46_17800 0.44 -0.4
3,751,518 + IAI46_17800 0.44 +0.4
3,751,518 + IAI46_17800 0.44 -0.4
3,751,579 + IAI46_17800 0.52 -1.1
3,751,629 + IAI46_17800 0.58 +1.2
3,751,629 + IAI46_17800 0.58 -0.7
3,751,630 - IAI46_17800 0.58 -1.4
3,751,756 + IAI46_17800 0.74 -0.4
3,751,757 - IAI46_17800 0.74 -0.0
3,751,769 + IAI46_17800 0.76 +1.1
3,751,799 + IAI46_17800 0.80 -0.1
3,751,851 + IAI46_17800 0.86 +0.2
3,751,851 + IAI46_17800 0.86 -0.6
3,751,851 + IAI46_17800 0.86 -0.9
3,751,851 + IAI46_17800 0.86 -1.1
3,751,852 - IAI46_17800 0.86 +1.2
3,751,852 - IAI46_17800 0.86 -0.6
3,751,852 - IAI46_17800 0.86 +0.4
3,751,852 - IAI46_17800 0.86 -0.2
3,751,852 - IAI46_17800 0.86 -0.3
3,751,852 - IAI46_17800 0.86 +0.2
3,751,852 - IAI46_17800 0.86 +0.3
3,751,864 + IAI46_17800 0.88 +0.1
3,751,864 + IAI46_17800 0.88 -0.0
3,751,865 - IAI46_17800 0.88 +0.0
3,751,865 - IAI46_17800 0.88 +0.2
3,751,868 + IAI46_17800 0.89 +1.3
3,751,917 - +0.5
3,751,928 + +1.3
3,751,929 - +0.5
3,751,929 - -0.3
3,751,942 + -0.5
3,752,049 + +0.0
3,752,050 - +0.8
3,752,193 + +0.8
3,752,193 + +1.5
3,752,194 - -0.4
3,752,194 - +1.2
3,752,833 - +1.4
3,752,891 - +0.3
3,752,893 - +1.0
3,752,893 - +0.0
3,752,895 - +0.5
3,752,895 - -0.2
3,752,895 - -0.1
3,752,895 - +1.1
3,752,895 - -0.5
3,752,895 - +0.4
3,752,914 - -0.7
3,753,085 + -1.0
3,753,085 + -2.1
3,753,086 - -2.5
3,753,086 - -1.6
3,753,086 - +0.4
3,753,086 - -0.7
3,753,086 - -1.4
3,753,089 + -1.7
3,753,090 - -1.1
3,753,090 - -2.0
3,753,090 - -2.5
3,753,090 - -1.9
3,753,099 + -3.7
3,753,265 + IAI46_17810 0.20 -0.9
3,753,308 - IAI46_17810 0.23 -0.4
3,753,442 - IAI46_17810 0.31 -2.4
3,753,482 + IAI46_17810 0.34 -0.9
3,753,521 - IAI46_17810 0.37 -0.7
3,753,536 + IAI46_17810 0.38 -2.2
3,753,557 + IAI46_17810 0.39 -2.2
3,753,664 + IAI46_17810 0.46 -0.6
3,753,713 - IAI46_17810 0.49 -2.2
3,753,787 + IAI46_17810 0.54 -2.0
3,753,787 + IAI46_17810 0.54 -0.2
3,753,787 + IAI46_17810 0.54 -1.2
3,753,787 + IAI46_17810 0.54 -3.3
3,753,787 + IAI46_17810 0.54 -1.3
3,753,788 - IAI46_17810 0.54 -1.3

Or see this region's nucleotide sequence